Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:32:04 (681194): wrapper (7.7.26015): starting
04:32:04 (681194): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 04:32:04] Arguments: --nthreads 4
[2026-02-04 04:32:04] Threads: 4
[2026-02-04 04:32:04] Checking for CVMFS
[2026-02-04 04:32:04] No cvmfs_config command found, will try listing directly
[2026-02-04 04:32:04] CVMFS is ok
[2026-02-04 04:32:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 04:32:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 04:32:04] Further information can be found at the LHC@home message board.
[2026-02-04 04:32:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 04:32:04] Checking for apptainer binary...
[2026-02-04 04:32:04] which: no apptainer in ((null))
[2026-02-04 04:32:04] apptainer is not installed, using version from CVMFS
[2026-02-04 04:32:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 04:32:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2026-02-04 04:32:04] apptainer works
[2026-02-04 04:32:04] Set ATHENA_PROC_NUMBER=4
[2026-02-04 04:32:04] Set ATHENA_CORE_NUMBER=4
[2026-02-04 04:32:04] Starting ATLAS job with PandaID=6997548165
[2026-02-04 04:32:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 10:20:49]  *** The last 200 lines of the pilot log: ***
[2026-02-04 10:20:49] 2026-02-04 08:53:22,366 | INFO     | log transfer has been attempted: DONE
[2026-02-04 10:20:49] 2026-02-04 08:53:22,366 | INFO     | job 6997548165 has finished - writing final server update
[2026-02-04 10:20:49] 2026-02-04 08:53:22,367 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_382914/.job.ad'
[2026-02-04 10:20:49] 2026-02-04 08:53:22,367 | INFO     | total number of processed events: 400 (read)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,375 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6997548165/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,376 | INFO     | extracted standard info from prmon json
[2026-02-04 10:20:49] 2026-02-04 08:53:22,376 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 10:20:49] 2026-02-04 08:53:22,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 10:20:49] 2026-02-04 08:53:22,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 10:20:49] 2026-02-04 08:53:22,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 10:20:49] 2026-02-04 08:53:22,383 | INFO     | fitting pss+swap vs Time
[2026-02-04 10:20:49] 2026-02-04 08:53:22,383 | INFO     | sum of square deviations: 9784425315.0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,386 | INFO     | sum of deviations: -66344421120.999985
[2026-02-04 10:20:49] 2026-02-04 08:53:22,386 | INFO     | mean x: 1770185560.5
[2026-02-04 10:20:49] 2026-02-04 08:53:22,387 | INFO     | mean y: 2394074.481012658
[2026-02-04 10:20:49] 2026-02-04 08:53:22,387 | INFO     | intersect: 12005340850.320898
[2026-02-04 10:20:49] 2026-02-04 08:53:22,387 | INFO     | chi2: 2.450447676869995
[2026-02-04 10:20:49] 2026-02-04 08:53:22,388 | INFO     | sum of square deviations: 9327281860.0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,391 | INFO     | sum of deviations: -46743721963.99999
[2026-02-04 10:20:49] 2026-02-04 08:53:22,391 | INFO     | mean x: 1770185408.0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,391 | INFO     | mean y: 2400534.003215434
[2026-02-04 10:20:49] 2026-02-04 08:53:22,391 | INFO     | intersect: 8873693991.010624
[2026-02-04 10:20:49] 2026-02-04 08:53:22,392 | INFO     | chi2: 1.788254202339387
[2026-02-04 10:20:49] 2026-02-04 08:53:22,392 | INFO     | current chi2=1.788254202339387 (change=27.02336723126612 %)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,393 | INFO     | sum of square deviations: 8884603792.5
[2026-02-04 10:20:49] 2026-02-04 08:53:22,395 | INFO     | sum of deviations: -45953098340.99999
[2026-02-04 10:20:49] 2026-02-04 08:53:22,395 | INFO     | mean x: 1770185255.5
[2026-02-04 10:20:49] 2026-02-04 08:53:22,396 | INFO     | mean y: 2400806.3921568627
[2026-02-04 10:20:49] 2026-02-04 08:53:22,396 | INFO     | intersect: 9158182991.800138
[2026-02-04 10:20:49] 2026-02-04 08:53:22,396 | INFO     | chi2: 1.786095963595833
[2026-02-04 10:20:49] 2026-02-04 08:53:22,396 | INFO     | current chi2=1.786095963595833 (change=0.12068970623587756 %)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,397 | INFO     | right removable region: 305
[2026-02-04 10:20:49] 2026-02-04 08:53:22,397 | INFO     | sum of square deviations: 9327281860.0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,400 | INFO     | sum of deviations: -105166395225.99998
[2026-02-04 10:20:49] 2026-02-04 08:53:22,400 | INFO     | mean x: 1770185713.0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,400 | INFO     | mean y: 2406909.511254019
[2026-02-04 10:20:49] 2026-02-04 08:53:22,400 | INFO     | intersect: 19961496075.149117
[2026-02-04 10:20:49] 2026-02-04 08:53:22,401 | INFO     | chi2: 1.1405362461883715
[2026-02-04 10:20:49] 2026-02-04 08:53:22,401 | INFO     | current chi2=1.1405362461883715 (change=53.45600491885627 %)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,402 | INFO     | sum of square deviations: 8884603792.5
[2026-02-04 10:20:49] 2026-02-04 08:53:22,404 | INFO     | sum of deviations: -97689499749.00002
[2026-02-04 10:20:49] 2026-02-04 08:53:22,405 | INFO     | mean x: 1770185865.5
[2026-02-04 10:20:49] 2026-02-04 08:53:22,405 | INFO     | mean y: 2404333.202614379
[2026-02-04 10:20:49] 2026-02-04 08:53:22,405 | INFO     | intersect: 19466251647.29719
[2026-02-04 10:20:49] 2026-02-04 08:53:22,405 | INFO     | chi2: 1.137858669101217
[2026-02-04 10:20:49] 2026-02-04 08:53:22,406 | INFO     | current chi2=1.137858669101217 (change=0.23476475176504985 %)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,406 | INFO     | left removable region: 20
[2026-02-04 10:20:49] 2026-02-04 08:53:22,406 | INFO     | sum of square deviations: 7178069470.0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,409 | INFO     | sum of deviations: -49560748202.0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,409 | INFO     | mean x: 1770185835.0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,409 | INFO     | mean y: 2401129.287719298
[2026-02-04 10:20:49] 2026-02-04 08:53:22,409 | INFO     | intersect: 12224591901.590473
[2026-02-04 10:20:49] 2026-02-04 08:53:22,410 | INFO     | chi2: 0.37589281908551697
[2026-02-04 10:20:49] 2026-02-04 08:53:22,410 | INFO     | current memory leak: -6.90 B/s (using 285 data points, chi2=0.38)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,411 | INFO     | could have reported an average CPU frequency of 2387 MHz (14 samples)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,411 | INFO     | ..............................
[2026-02-04 10:20:49] 2026-02-04 08:53:22,411 | INFO     | . Timing measurements:
[2026-02-04 10:20:49] 2026-02-04 08:53:22,411 | INFO     | . get job = 0 s
[2026-02-04 10:20:49] 2026-02-04 08:53:22,411 | INFO     | . initial setup = 6 s
[2026-02-04 10:20:49] 2026-02-04 08:53:22,411 | INFO     | . payload setup = 6 s
[2026-02-04 10:20:49] 2026-02-04 08:53:22,412 | INFO     | . stage-in = 0 s
[2026-02-04 10:20:49] 2026-02-04 08:53:22,412 | INFO     | . payload execution = 19246 s
[2026-02-04 10:20:49] 2026-02-04 08:53:22,412 | INFO     | . stage-out = 1 s
[2026-02-04 10:20:49] 2026-02-04 08:53:22,412 | INFO     | . log creation = 0 s
[2026-02-04 10:20:49] 2026-02-04 08:53:22,412 | INFO     | ..............................
[2026-02-04 10:20:49] 2026-02-04 08:53:22,517 | INFO     | 
[2026-02-04 10:20:49] 2026-02-04 08:53:22,517 | INFO     | job summary report
[2026-02-04 10:20:49] 2026-02-04 08:53:22,517 | INFO     | --------------------------------------------------
[2026-02-04 10:20:49] 2026-02-04 08:53:22,518 | INFO     | PanDA job id: 6997548165
[2026-02-04 10:20:49] 2026-02-04 08:53:22,518 | INFO     | task id: 48431080
[2026-02-04 10:20:49] 2026-02-04 08:53:22,518 | INFO     | errors: (none)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,518 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 10:20:49] 2026-02-04 08:53:22,518 | INFO     | pilot state: finished 
[2026-02-04 10:20:49] 2026-02-04 08:53:22,518 | INFO     | transexitcode: 0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,518 | INFO     | exeerrorcode: 0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,518 | INFO     | exeerrordiag: 
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | exitcode: 0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | exitmsg: OK
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | cpuconsumptiontime: 73532 s
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | nevents: 400
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | neventsw: 0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | pid: 689802
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | pgrp: 689802
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | corecount: 4
[2026-02-04 10:20:49] 2026-02-04 08:53:22,519 | INFO     | event service: False
[2026-02-04 10:20:49] 2026-02-04 08:53:22,520 | INFO     | sizes: {0: 2277838, 1: 2278355, 2: 2278355, 19255: 2311315, 19258: 2320391, 19259: 2320529}
[2026-02-04 10:20:49] 2026-02-04 08:53:22,520 | INFO     | --------------------------------------------------
[2026-02-04 10:20:49] 2026-02-04 08:53:22,520 | INFO     | 
[2026-02-04 10:20:49] 2026-02-04 08:53:22,520 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-02-04 10:20:49] 2026-02-04 08:53:22,539 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,539 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,539 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,539 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,541 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,542 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 10:20:49] 2026-02-04 08:53:22,542 | INFO     | job 6997548165 has completed (purged errors)
[2026-02-04 10:20:49] 2026-02-04 08:53:22,542 | INFO     | overall cleanup function is called
[2026-02-04 10:20:49] 2026-02-04 08:53:23,551 | INFO     | --- collectZombieJob: --- 10, [689802]
[2026-02-04 10:20:49] 2026-02-04 08:53:23,551 | INFO     | zombie collector waiting for pid 689802
[2026-02-04 10:20:49] 2026-02-04 08:53:23,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 10:20:49] 2026-02-04 08:53:23,551 | INFO     | collected zombie processes
[2026-02-04 10:20:49] 2026-02-04 08:53:23,551 | INFO     | will attempt to kill all subprocesses of pid=689802
[2026-02-04 10:20:49] 2026-02-04 08:53:23,847 | INFO     | process IDs to be killed: [689802] (in reverse order)
[2026-02-04 10:20:49] 2026-02-04 08:53:23,925 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 10:20:49] 2026-02-04 08:53:23,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 10:20:49] 2026-02-04 08:53:23,935 | INFO     | did not find any defunct processes belonging to 689802
[2026-02-04 10:20:49] 2026-02-04 08:53:23,943 | INFO     | did not find any defunct processes belonging to 689802
[2026-02-04 10:20:49] 2026-02-04 08:53:23,943 | INFO     | ready for new job
[2026-02-04 10:20:49] 2026-02-04 08:53:23,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 10:20:49] 2026-02-04 08:53:23,946 | INFO     | **************************************
[2026-02-04 10:20:49] 2026-02-04 08:53:23,946 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 10:20:49] 2026-02-04 08:53:23,946 | INFO     | **************************************
[2026-02-04 10:20:49] 2026-02-04 08:53:23,946 | INFO     | 
[2026-02-04 10:20:49] 2026-02-04 08:53:23,949 | INFO     | architecture information:
[2026-02-04 10:20:49] 2026-02-04 08:53:23,949 | INFO     | executing command: cat /etc/os-release
[2026-02-04 10:20:49] 2026-02-04 08:53:23,962 | INFO     | cat /etc/os-release:
[2026-02-04 10:20:49] NAME="CentOS Linux"
[2026-02-04 10:20:49] VERSION="7 (Core)"
[2026-02-04 10:20:49] ID="centos"
[2026-02-04 10:20:49] ID_LIKE="rhel fedora"
[2026-02-04 10:20:49] VERSION_ID="7"
[2026-02-04 10:20:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 10:20:49] ANSI_COLOR="0;31"
[2026-02-04 10:20:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 10:20:49] HOME_URL="https://www.centos.org/"
[2026-02-04 10:20:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 10:20:49] 
[2026-02-04 10:20:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 10:20:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 10:20:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 10:20:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 10:20:49] 
[2026-02-04 10:20:49] 2026-02-04 08:53:23,962 | INFO     | **************************************
[2026-02-04 10:20:49] 2026-02-04 08:53:24,464 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-02-04 10:20:49] 2026-02-04 08:53:24,478 | INFO     | sufficient remaining disk space (1658877640704 B)
[2026-02-04 10:20:49] 2026-02-04 08:53:24,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 10:20:49] 2026-02-04 08:53:24,478 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 10:20:49] 2026-02-04 08:53:24,478 | INFO     | update_server=False
[2026-02-04 10:20:49] 2026-02-04 08:53:24,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 10:20:49] 2026-02-04 08:53:24,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 10:20:49] 2026-02-04 08:53:24,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 10:20:49] 2026-02-04 08:53:24,501 | INFO     | all data control threads have been joined
[2026-02-04 10:20:49] 2026-02-04 08:53:24,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 10:20:49] 2026-02-04 08:53:24,829 | INFO     | aborting loop
[2026-02-04 10:20:49] 2026-02-04 08:53:25,484 | INFO     | [job] retrieve thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:25,484 | INFO     | [job] queue monitor thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:25,503 | INFO     | [data] control thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:25,648 | INFO     | [payload] validate_post thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:25,658 | INFO     | [data] copytool_in thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:25,834 | INFO     | [job] job monitor thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:25,857 | INFO     | [job] validate thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:25,976 | INFO     | all payload control threads have been joined
[2026-02-04 10:20:49] 2026-02-04 08:53:26,031 | INFO     | all job control threads have been joined
[2026-02-04 10:20:49] 2026-02-04 08:53:26,298 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:26,485 | INFO     | [data] copytool_out thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:26,572 | INFO     | [payload] failed_post thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:26,638 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:26,683 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:26,718 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:26,981 | INFO     | [payload] control thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:27,034 | INFO     | [job] control thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:27,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 10:20:49] 2026-02-04 08:53:31,458 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 10:20:49] 2026-02-04 08:53:50,793 | INFO     | [monitor] cgroup control has ended
[2026-02-04 10:20:49] 2026-02-04 08:53:52,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23016919856960)>', '<ExcThread(monitor, started 23016678627072)>']
[2026-02-04 10:20:49] 2026-02-04 08:53:54,664 | INFO     | PID=685188 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 10:20:49] 2026-02-04 08:53:54,664 | INFO     | .. there are 5 such processes running
[2026-02-04 10:20:49] 2026-02-04 08:53:54,664 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 10:20:49] 2026-02-04 08:53:54,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 10:20:49] 2026-02-04 08:53:54,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 10:20:49] 2026-02-04 08:53:54,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 10:20:49] 2026-02-04 08:53:54,665 | INFO     | [monitor] control thread has ended
[2026-02-04 10:20:49] 2026-02-04 08:53:57,029 | INFO     | all workflow threads have been joined
[2026-02-04 10:20:49] 2026-02-04 08:53:57,030 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 10:20:49] 2026-02-04 08:53:57,030 | INFO     | traces error code: 0
[2026-02-04 10:20:49] 2026-02-04 08:53:57,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 10:20:49] 2026-02-04 08:53:57,183 [wrapper] ==== pilot stdout END ====
[2026-02-04 10:20:49] 2026-02-04 08:53:57,186 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 10:20:49] 2026-02-04 08:53:57,189 [wrapper] pilotpid: 685188
[2026-02-04 10:20:49] 2026-02-04 08:53:57,191 [wrapper] Pilot exit status: 0
[2026-02-04 10:20:49] 2026-02-04 08:53:57,202 [wrapper] pandaids: 6997548165
[2026-02-04 10:20:49] 2026-02-04 08:53:57,262 [wrapper] cleanup supervisor_pilot  929425 685189
[2026-02-04 10:20:49] 2026-02-04 08:53:57,266 [wrapper] Test setup, not cleaning
[2026-02-04 10:20:49] 2026-02-04 08:53:57,269 [wrapper] apfmon messages muted
[2026-02-04 10:20:49] 2026-02-04 08:53:57,272 [wrapper] ==== wrapper stdout END ====
[2026-02-04 10:20:49] 2026-02-04 08:53:57,275 [wrapper] ==== wrapper stderr END ====
[2026-02-04 10:20:49]  *** Error codes and diagnostics ***
[2026-02-04 10:20:49]     "exeErrorCode": 0,
[2026-02-04 10:20:49]     "exeErrorDiag": "",
[2026-02-04 10:20:49]     "pilotErrorCode": 0,
[2026-02-04 10:20:49]     "pilotErrorDiag": "",
[2026-02-04 10:20:49]  *** Listing of results directory ***
[2026-02-04 10:20:49] total 908084
[2026-02-04 10:20:49] -rwx------ 1 boinc boinc     36322 Feb  2 23:19 runpilot2-wrapper.sh
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc      5111 Feb  2 23:19 queuedata.json
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc    584422 Feb  2 23:19 pilot3.tar.gz
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc       100 Feb  4 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 10:20:49] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 04:31 run_atlas
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc       105 Feb  4 04:31 job.xml
[2026-02-04 10:20:49] -rw-r--r-- 2 boinc boinc 655147970 Feb  4 04:32 EVNT.48431078._000166.pool.root.1
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc      6423 Feb  4 04:32 init_data.xml
[2026-02-04 10:20:49] drwxrwx--x 2 boinc boinc      4096 Feb  4 04:32 shared
[2026-02-04 10:20:49] -rw-r--r-- 2 boinc boinc    597768 Feb  4 04:32 input.tar.gz
[2026-02-04 10:20:49] -rw-r--r-- 2 boinc boinc     15845 Feb  4 04:32 start_atlas.sh
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc         0 Feb  4 04:32 boinc_lockfile
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc      2558 Feb  4 04:32 pandaJob.out
[2026-02-04 10:20:49] -rw------- 1 boinc boinc   1009244 Feb  4 04:32 agis_schedconf.cvmfs.json
[2026-02-04 10:20:49] -rw------- 1 boinc boinc       445 Feb  4 04:32 workernode_map.json
[2026-02-04 10:20:49] drwx------ 5 boinc boinc      4096 Feb  4 04:32 pilot3
[2026-02-04 10:20:49] -rw------- 1 boinc boinc 264371830 Feb  4 09:52 HITS.48431080._008630.pool.root.1
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc       532 Feb  4 09:52 boinc_task_state.xml
[2026-02-04 10:20:49] -rw------- 1 boinc boinc      1037 Feb  4 09:53 memory_monitor_summary.json
[2026-02-04 10:20:49] -rw------- 1 boinc boinc        95 Feb  4 09:53 pilot_heartbeat.json
[2026-02-04 10:20:49] -rw------- 1 boinc boinc   1511668 Feb  4 09:53 agis_ddmendpoints.agis.ALL.json
[2026-02-04 10:20:49] -rw------- 1 boinc boinc    502820 Feb  4 09:53 log.48431080._008630.job.log.tgz.1
[2026-02-04 10:20:49] -rw------- 1 boinc boinc      6401 Feb  4 09:53 heartbeat.json
[2026-02-04 10:20:49] -rw------- 1 boinc boinc      4829 Feb  4 09:53 pilotlog.txt
[2026-02-04 10:20:49] -rw------- 1 boinc boinc   2707239 Feb  4 09:53 log.48431080._008630.job.log.1
[2026-02-04 10:20:49] -rw------- 1 boinc boinc       357 Feb  4 09:53 output.list
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc       620 Feb  4 09:53 runtime_log
[2026-02-04 10:20:49] -rw------- 1 boinc boinc   3225600 Feb  4 09:53 result.tar.gz
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc      9205 Feb  4 09:53 runtime_log.err
[2026-02-04 10:20:49] -rw------- 1 boinc boinc       665 Feb  4 09:53 BX7MDmERH78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpdTKDmuD6b3m.diag
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc        28 Feb  4 10:20 wrapper_checkpoint.txt
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc      8192 Feb  4 10:20 boinc_mmap_file
[2026-02-04 10:20:49] -rw-r--r-- 1 boinc boinc     20868 Feb  4 10:20 stderr.txt
[2026-02-04 10:20:49] HITS file was successfully produced:
[2026-02-04 10:20:49] -rw------- 1 boinc boinc 264371830 Feb  4 09:52 shared/HITS.pool.root.1
[2026-02-04 10:20:49]  *** Contents of shared directory: ***
[2026-02-04 10:20:49] total 901732
[2026-02-04 10:20:49] -rw-r--r-- 2 boinc boinc 655147970 Feb  4 04:32 ATLAS.root_0
[2026-02-04 10:20:49] -rw-r--r-- 2 boinc boinc    597768 Feb  4 04:32 input.tar.gz
[2026-02-04 10:20:49] -rw-r--r-- 2 boinc boinc     15845 Feb  4 04:32 start_atlas.sh
[2026-02-04 10:20:49] -rw------- 1 boinc boinc 264371830 Feb  4 09:52 HITS.pool.root.1
[2026-02-04 10:20:49] -rw------- 1 boinc boinc   3225600 Feb  4 09:53 result.tar.gz
10:20:51 (681194): run_atlas exited; CPU time 74340.155225
10:20:51 (681194): called boinc_finish(0)

</stderr_txt>
]]>

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