Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-03 06:17:36 (4053512): vboxwrapper version 26210
2026-02-03 06:17:36 (4053512): BOINC client version: 8.2.8
2026-02-03 06:17:37 (4053512): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-02-03 06:17:37 (4053512): Successfully copied 'init_data.xml' to the shared directory.
2026-02-03 06:17:37 (4053512): Create VM. (boinc_0f8b1091541d3f73, slot#36)
2026-02-03 06:17:37 (4053512): Setting Memory Size for VM. (4096MB)
2026-02-03 06:17:38 (4053512): Setting CPU Count for VM. (1)
2026-02-03 06:17:38 (4053512): Setting Chipset Options for VM.
2026-02-03 06:17:38 (4053512): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-03 06:17:38 (4053512): Setting Boot Options for VM.
2026-02-03 06:17:39 (4053512): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-03 06:17:39 (4053512): Enabling VM Network Access.
2026-02-03 06:17:39 (4053512): Disabling USB Support for VM.
2026-02-03 06:17:39 (4053512): Disabling COM Port Support for VM.
2026-02-03 06:17:40 (4053512): Disabling LPT Port Support for VM.
2026-02-03 06:17:40 (4053512): Disabling Audio Support for VM.
2026-02-03 06:17:40 (4053512): Disabling Clipboard Support for VM.
2026-02-03 06:17:40 (4053512): Disabling Drag and Drop Support for VM.
2026-02-03 06:17:41 (4053512): Adding storage controller(s) to VM.
2026-02-03 06:17:41 (4053512): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-03 06:17:41 (4053512): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-03 06:17:41 (4053512): forwarding host port 52625 to guest port 80
2026-02-03 06:17:42 (4053512): Enabling remote desktop for VM.
2026-02-03 06:17:42 (4053512): Enabling shared directory for VM.
2026-02-03 06:17:43 (4053512): Starting VM using VBoxManage interface. (boinc_0f8b1091541d3f73, slot#36)
2026-02-03 06:17:44 (4053512): Successfully started VM. (PID = '4054243')
2026-02-03 06:17:44 (4053512): Reporting VM Process ID to BOINC.
2026-02-03 06:17:44 (4053512): Guest Log: BIOS: VirtualBox 7.2.2
2026-02-03 06:17:44 (4053512): Guest Log: CPUID EDX: 0x178bfbff
2026-02-03 06:17:44 (4053512): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-03 06:17:44 (4053512): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-03 06:17:44 (4053512): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-03 06:17:44 (4053512): Detected: Web Application Enabled (http://localhost:52625)
2026-02-03 06:17:44 (4053512): Detected: Remote Desktop Enabled (localhost:46039)
2026-02-03 06:17:44 (4053512): Preference change detected
2026-02-03 06:17:44 (4053512): Setting CPU throttle for VM. (100%)
2026-02-03 06:17:44 (4053512): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-03 06:17:46 (4053512): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-03 06:17:46 (4053512): Guest Log: BIOS: Booting from Hard Disk...
2026-02-03 06:17:49 (4053512): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-03 06:17:49 (4053512): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-03 06:17:49 (4053512): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-03 06:17:54 (4053512): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-03 06:17:54 (4053512): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-03 06:18:07 (4053512): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-03 06:18:07 (4053512): Guest Log: 00:00:00.000316 main     Log opened 2026-02-03T05:18:05.313170000Z
2026-02-03 06:18:07 (4053512): Guest Log: 00:00:00.000444 main     OS Product: Linux
2026-02-03 06:18:07 (4053512): Guest Log: 00:00:00.000486 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-03 06:18:07 (4053512): Guest Log: 00:00:00.000525 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-03 06:18:07 (4053512): Guest Log: 00:00:00.000555 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-03 06:18:07 (4053512): Guest Log: 00:00:00.000556 main     Process ID: 1261
2026-02-03 06:18:07 (4053512): Guest Log: 00:00:00.000557 main     Package type: LINUX_64BITS_GENERIC
2026-02-03 06:18:07 (4053512): Guest Log: 00:00:00.002560 main     5.2.32 r132073 started. Verbose level = 0
2026-02-03 06:18:07 (4053512): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-03 06:18:07 (4053512): Guest Log: [INFO] Mounting shared directory
2026-02-03 06:18:07 (4053512): Guest Log: [INFO] Checking for init_data.xml
2026-02-03 06:18:13 (4053512): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-03 06:18:13 (4053512): Guest Log: [INFO] Detected branch: prod
2026-02-03 06:18:13 (4053512): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-03 06:18:13 (4053512): Guest Log: Copying input files
2026-02-03 06:18:16 (4053512): Guest Log: Copied input files into RunAtlas.
2026-02-03 06:18:16 (4053512): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-02-03 06:18:24 (4053512): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-03 06:18:25 (4053512): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-03 06:18:25 (4053512): Guest Log: 2.6.3.0 1530 0 31728 155819 4 1 3120738 4096000 0 65024 0 0 n/a 1336 822 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-02-03 06:18:25 (4053512): Guest Log: copied the webapp to /var/www
2026-02-03 06:18:25 (4053512): Guest Log: core_number=1
2026-02-03 06:18:26 (4053512): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-03 06:18:26 (4053512): Guest Log:  *** Starting ATLAS job. (PandaID=6993745346 taskID=48318034) ***
2026-02-03 07:56:45 (4053512): Status Report: Elapsed Time: '6000.000000'
2026-02-03 07:56:45 (4053512): Status Report: CPU Time: '5899.120000'
2026-02-03 09:35:45 (4053512): Status Report: Elapsed Time: '12000.000000'
2026-02-03 09:35:45 (4053512): Status Report: CPU Time: '11844.810000'
2026-02-03 11:14:46 (4053512): Status Report: Elapsed Time: '18000.000000'
2026-02-03 11:14:46 (4053512): Status Report: CPU Time: '17789.890000'
2026-02-03 12:53:46 (4053512): Status Report: Elapsed Time: '24000.000000'
2026-02-03 12:53:46 (4053512): Status Report: CPU Time: '23735.710000'
2026-02-03 14:32:47 (4053512): Status Report: Elapsed Time: '30000.000000'
2026-02-03 14:32:47 (4053512): Status Report: CPU Time: '29681.380000'
2026-02-03 16:11:47 (4053512): Status Report: Elapsed Time: '36000.000000'
2026-02-03 16:11:47 (4053512): Status Report: CPU Time: '35626.500000'
2026-02-03 17:50:48 (4053512): Status Report: Elapsed Time: '42000.000000'
2026-02-03 17:50:48 (4053512): Status Report: CPU Time: '41571.580000'
2026-02-03 19:29:48 (4053512): Status Report: Elapsed Time: '48000.000000'
2026-02-03 19:29:48 (4053512): Status Report: CPU Time: '47516.600000'
2026-02-03 21:08:49 (4053512): Status Report: Elapsed Time: '54000.000000'
2026-02-03 21:08:49 (4053512): Status Report: CPU Time: '53461.890000'
2026-02-03 21:47:59 (4053512): Guest Log:  *** Job finished ***
2026-02-03 21:47:59 (4053512): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:06,824 | INFO     | end of generic workflow (traces error code: 0)
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:06,824 | INFO     | traces error code: 0
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:06,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:18,971 | INFO     | PID=5864 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:18,972 | INFO     | found 0 job(s) in 20 queues
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:18,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:18,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:18,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:18,973 | CRITICAL | thread 'MainThread' is not alive
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:18,973 | INFO     | [monitor] control thread has ended
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,121 [wrapper] ==== pilot stdout END ====
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,128 [wrapper] ==== wrapper stdout RESUME ====
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,133 [wrapper] pilotpid: 5864
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,139 [wrapper] Pilot exit status: 0
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,168 [wrapper] pandaids: 6993745346
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,201 [wrapper] cleanup supervisor_pilot  7670 5865
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,207 [wrapper] Test setup, not cleaning
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,212 [wrapper] apfmon messages muted
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,218 [wrapper] ==== wrapper stdout END ====
2026-02-03 21:47:59 (4053512): Guest Log: 2026-02-03 20:48:19,223 [wrapper] ==== wrapper stderr END ====
2026-02-03 21:47:59 (4053512): Guest Log:  *** Error codes and diagnostics ***
2026-02-03 21:47:59 (4053512): Guest Log:     "exeErrorCode": 0,
2026-02-03 21:47:59 (4053512): Guest Log:     "exeErrorDiag": "",
2026-02-03 21:47:59 (4053512): Guest Log:     "pilotErrorCode": 0,
2026-02-03 21:47:59 (4053512): Guest Log:     "pilotErrorDiag": "",
2026-02-03 21:47:59 (4053512): Guest Log:  *** Listing of results directory ***
2026-02-03 21:47:59 (4053512): Guest Log: total 195748
2026-02-03 21:47:59 (4053512): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  3 03:09 queuedata.json
2026-02-03 21:47:59 (4053512): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Feb  3 03:09 pilot3.tar.gz
2026-02-03 21:47:59 (4053512): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  3 03:09 runpilot2-wrapper.sh
2026-02-03 21:47:59 (4053512): Guest Log: -rw-r--r--. 1 atlas atlas      9394 Feb  3 05:18 init_data.xml
2026-02-03 21:47:59 (4053512): Guest Log: -rw-r--r--. 1 atlas atlas    597756 Feb  3 05:18 input.tar.gz
2026-02-03 21:47:59 (4053512): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb  3 05:18 start_atlas.sh
2026-02-03 21:47:59 (4053512): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  3 05:18 EVNT.48318032._000128.pool.root.1 -> /data/./ATLAS.root_0
2026-02-03 21:47:59 (4053512): Guest Log: -rw-r--r--. 1 atlas atlas      2535 Feb  3 05:18 pandaJob.out
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas        50 Feb  3 05:18 setup.sh.local
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas   1009324 Feb  3 05:18 agis_schedconf.cvmfs.json
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas       428 Feb  3 05:18 workernode_map.json
2026-02-03 21:47:59 (4053512): Guest Log: drwx------. 5 atlas atlas      4096 Feb  3 05:18 pilot3
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas 179473843 Feb  3 20:47 HITS.48318034._006341.pool.root.1
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas        95 Feb  3 20:47 pilot_heartbeat.json
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas      1025 Feb  3 20:47 memory_monitor_summary.json
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  3 20:47 agis_ddmendpoints.agis.ALL.json
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas    916852 Feb  3 20:47 log.48318034._006341.job.log.tgz.1
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas      6368 Feb  3 20:47 heartbeat.json
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas       814 Feb  3 20:48 pilotlog.txt
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas   7631882 Feb  3 20:48 log.48318034._006341.job.log.1
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas       357 Feb  3 20:48 output.list
2026-02-03 21:47:59 (4053512): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  3 20:48 runtime_log
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas   8570880 Feb  3 20:48 result.tar.gz
2026-02-03 21:47:59 (4053512): Guest Log: -rw-r--r--. 1 atlas atlas      9111 Feb  3 20:48 runtime_log.err
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas       655 Feb  3 20:48 0V4KDmCyL78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm61TKDm9GqXpn.diag
2026-02-03 21:47:59 (4053512): Guest Log: Looking for outputfile HITS.48318034._006341.pool.root.1
2026-02-03 21:47:59 (4053512): Guest Log: HITS file was successfully produced
2026-02-03 21:47:59 (4053512): Guest Log: -rw-------. 1 atlas atlas 179473843 Feb  3 20:47 /home/atlas/RunAtlas/HITS.48318034._006341.pool.root.1
2026-02-03 21:48:00 (4053512): Guest Log: Successfully finished the ATLAS job!
2026-02-03 21:48:00 (4053512): Guest Log: Copying the results back to the shared directory!
2026-02-03 21:48:00 (4053512): Guest Log:  *** Contents of shared directory: ***
2026-02-03 21:48:00 (4053512): Guest Log: total 498332
2026-02-03 21:48:00 (4053512): Guest Log: -rw-r--r--. 1 root root 501088007 Feb  3 05:17 ATLAS.root_0
2026-02-03 21:48:00 (4053512): Guest Log: -rw-r--r--. 1 root root      9394 Feb  3 05:17 init_data.xml
2026-02-03 21:48:00 (4053512): Guest Log: -rw-r--r--. 1 root root    597756 Feb  3 05:17 input.tar.gz
2026-02-03 21:48:00 (4053512): Guest Log: -rw-r--r--. 1 root root   8570880 Feb  3 20:48 result.tar.gz
2026-02-03 21:48:00 (4053512): Guest Log: -rw-r--r--. 1 root root     15845 Feb  3 05:17 start_atlas.sh
2026-02-03 21:48:00 (4053512): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-03 21:48:00 (4053512): VM Completion File Detected.
2026-02-03 21:48:00 (4053512): Powering off VM.
2026-02-03 21:48:01 (4053512): Successfully stopped VM.
2026-02-03 21:48:01 (4053512): Deregistering VM. (boinc_0f8b1091541d3f73, slot#36)
2026-02-03 21:48:02 (4053512): Removing network bandwidth throttle group from VM.
2026-02-03 21:48:02 (4053512): Removing VM from VirtualBox.
2026-02-03 21:48:07 (4053512): called boinc_finish(0)

</stderr_txt>
]]>

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