Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:02:16 (1337572): wrapper (7.7.26015): starting
16:02:16 (1337572): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 16:02:16] Arguments: --nthreads 3
[2026-02-03 16:02:16] Threads: 3
[2026-02-03 16:02:16] Checking for CVMFS
[2026-02-03 16:02:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 16:02:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 16:02:18] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 16:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 16:02:18] 2.9.2.0 1077466 1593 75636 155832 1 50 25507496 36864001 0 130560 0 676443 99.982 61876 14319 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-03 16:02:18] CVMFS is ok
[2026-02-03 16:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 16:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 16:02:18] Further information can be found at the LHC@home message board.
[2026-02-03 16:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 16:02:18] Checking for apptainer binary...
[2026-02-03 16:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 16:02:18] Running /usr/bin/apptainer --version
[2026-02-03 16:02:18] apptainer version 1.4.1-1.1
[2026-02-03 16:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 16:02:18] magicA246a
[2026-02-03 16:02:18] apptainer works
[2026-02-03 16:02:18] Set ATHENA_PROC_NUMBER=3
[2026-02-03 16:02:18] Set ATHENA_CORE_NUMBER=3
[2026-02-03 16:02:18] Starting ATLAS job with PandaID=6997218360
[2026-02-03 16:02:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 18:06:41]  *** The last 200 lines of the pilot log: ***
[2026-02-03 18:06:41] 2026-02-03 17:05:40,531 | INFO     | ready for new job
[2026-02-03 18:06:41] 2026-02-03 17:05:40,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 18:06:41] 2026-02-03 17:05:40,531 | INFO     | **************************************
[2026-02-03 18:06:41] 2026-02-03 17:05:40,531 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 18:06:41] 2026-02-03 17:05:40,531 | INFO     | **************************************
[2026-02-03 18:06:41] 2026-02-03 17:05:40,532 | INFO     | 
[2026-02-03 18:06:41] 2026-02-03 17:05:40,532 | INFO     | architecture information:
[2026-02-03 18:06:41] 2026-02-03 17:05:40,532 | INFO     | executing command: cat /etc/os-release
[2026-02-03 18:06:41] 2026-02-03 17:05:40,541 | INFO     | cat /etc/os-release:
[2026-02-03 18:06:41] NAME="CentOS Linux"
[2026-02-03 18:06:41] VERSION="7 (Core)"
[2026-02-03 18:06:41] ID="centos"
[2026-02-03 18:06:41] ID_LIKE="rhel fedora"
[2026-02-03 18:06:41] VERSION_ID="7"
[2026-02-03 18:06:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 18:06:41] ANSI_COLOR="0;31"
[2026-02-03 18:06:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 18:06:41] HOME_URL="https://www.centos.org/"
[2026-02-03 18:06:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 18:06:41] 
[2026-02-03 18:06:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 18:06:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 18:06:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 18:06:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 18:06:41] 
[2026-02-03 18:06:41] 2026-02-03 17:05:40,541 | INFO     | **************************************
[2026-02-03 18:06:41] 2026-02-03 17:05:41,043 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-03 18:06:41] 2026-02-03 17:05:41,055 | INFO     | sufficient remaining disk space (275741933568 B)
[2026-02-03 18:06:41] 2026-02-03 17:05:41,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 18:06:41] 2026-02-03 17:05:41,056 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 18:06:41] 2026-02-03 17:05:41,056 | INFO     | update_server=False
[2026-02-03 18:06:41] 2026-02-03 17:05:41,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 18:06:41] 2026-02-03 17:05:41,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 18:06:41] 2026-02-03 17:05:41,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 18:06:41] 2026-02-03 17:05:41,170 | INFO     | all data control threads have been joined
[2026-02-03 18:06:41] 2026-02-03 17:05:41,228 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 18:06:41] 2026-02-03 17:05:41,229 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 18:06:41] 2026-02-03 17:05:41,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 18:06:41] 2026-02-03 17:05:41,229 | INFO     | will abort loop
[2026-02-03 18:06:41] 2026-02-03 17:05:41,756 | INFO     | all job control threads have been joined
[2026-02-03 18:06:41] 2026-02-03 17:05:42,061 | INFO     | [job] retrieve thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,061 | INFO     | [job] queue monitor thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,128 | INFO     | all payload control threads have been joined
[2026-02-03 18:06:41] 2026-02-03 17:05:42,176 | INFO     | [data] control thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,234 | INFO     | [job] job monitor thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 18:06:41] 2026-02-03 17:05:42,325 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,641 | INFO     | [job] validate thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,657 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,752 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,762 | INFO     | [job] control thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,816 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:42,943 | INFO     | [data] copytool_in thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:43,012 | INFO     | [payload] failed_post thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:43,130 | INFO     | [payload] control thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:43,549 | INFO     | [payload] validate_post thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:44,322 | INFO     | [data] copytool_out thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:05:45,063 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 18:06:41] 2026-02-03 17:06:11,664 | INFO     | PID=1341614 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 18:06:41] 2026-02-03 17:06:11,664 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 18:06:41] 2026-02-03 17:06:11,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 18:06:41] 2026-02-03 17:06:11,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 18:06:41] 2026-02-03 17:06:35,537 | INFO     | [monitor] cgroup control has ended
[2026-02-03 18:06:41] 2026-02-03 17:06:36,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728451430208)>', '<ExcThread(monitor, started 139727810316032)>']
[2026-02-03 18:06:41] 2026-02-03 17:06:36,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 18:06:41] 2026-02-03 17:06:36,789 | INFO     | [monitor] control thread has ended
[2026-02-03 18:06:41] 2026-02-03 17:06:41,442 | INFO     | all workflow threads have been joined
[2026-02-03 18:06:41] 2026-02-03 17:06:41,442 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 18:06:41] 2026-02-03 17:06:41,442 | INFO     | traces error code: 0
[2026-02-03 18:06:41] 2026-02-03 17:06:41,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 18:06:41] 2026-02-03 17:06:41,493 [wrapper] ==== pilot stdout END ====
[2026-02-03 18:06:41] 2026-02-03 17:06:41,496 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 18:06:41] 2026-02-03 17:06:41,498 [wrapper] pilotpid: 1341614
[2026-02-03 18:06:41] 2026-02-03 17:06:41,501 [wrapper] Pilot exit status: 0
[2026-02-03 18:06:41] 2026-02-03 17:06:41,508 [wrapper] pandaids: 6997218360
[2026-02-03 18:06:41] 2026-02-03 17:06:41,528 [wrapper] cleanup supervisor_pilot 1353248 1341615
[2026-02-03 18:06:41] 2026-02-03 17:06:41,530 [wrapper] Test setup, not cleaning
[2026-02-03 18:06:41] 2026-02-03 17:06:41,532 [wrapper] apfmon messages muted
[2026-02-03 18:06:41] 2026-02-03 17:06:41,534 [wrapper] ==== wrapper stdout END ====
[2026-02-03 18:06:41] 2026-02-03 17:06:41,537 [wrapper] ==== wrapper stderr END ====
[2026-02-03 18:06:41]  *** Error codes and diagnostics ***
[2026-02-03 18:06:41]     "exeErrorCode": 0,
[2026-02-03 18:06:41]     "exeErrorDiag": "",
[2026-02-03 18:06:41]     "pilotErrorCode": 0,
[2026-02-03 18:06:41]     "pilotErrorDiag": "",
[2026-02-03 18:06:41]  *** Listing of results directory ***
[2026-02-03 18:06:41] total 952220
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc    584422 Feb  2 23:19 pilot3.tar.gz
[2026-02-03 18:06:41] -rwx------ 1 boinc boinc     36322 Feb  2 23:20 runpilot2-wrapper.sh
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc      5111 Feb  2 23:21 queuedata.json
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc       100 Feb  3 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 18:06:41] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 16:02 run_atlas
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc       105 Feb  3 16:02 job.xml
[2026-02-03 18:06:41] -rw-r--r-- 2 boinc boinc 684031048 Feb  3 16:02 EVNT.48431094._000052.pool.root.1
[2026-02-03 18:06:41] -rw-r--r-- 2 boinc boinc    597771 Feb  3 16:02 input.tar.gz
[2026-02-03 18:06:41] -rw-r--r-- 2 boinc boinc     15845 Feb  3 16:02 start_atlas.sh
[2026-02-03 18:06:41] drwxrwx--x 2 boinc boinc      4096 Feb  3 16:02 shared
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc         0 Feb  3 16:02 boinc_setup_complete
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc      6447 Feb  3 16:02 init_data.xml
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc         0 Feb  3 16:02 boinc_lockfile
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc      2554 Feb  3 16:02 pandaJob.out
[2026-02-03 18:06:41] -rw------- 1 boinc boinc   1009258 Feb  3 16:02 agis_schedconf.cvmfs.json
[2026-02-03 18:06:41] -rw------- 1 boinc boinc   1511668 Feb  3 16:02 agis_ddmendpoints.agis.ALL.json
[2026-02-03 18:06:41] -rw------- 1 boinc boinc       428 Feb  3 16:02 workernode_map.json
[2026-02-03 18:06:41] drwx------ 5 boinc boinc      4096 Feb  3 16:02 pilot3
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc       530 Feb  3 18:05 boinc_task_state.xml
[2026-02-03 18:06:41] -rw------- 1 boinc boinc 284321661 Feb  3 18:05 HITS.48431096._002705.pool.root.1
[2026-02-03 18:06:41] -rw------- 1 boinc boinc      1016 Feb  3 18:05 memory_monitor_summary.json
[2026-02-03 18:06:41] -rw------- 1 boinc boinc    331108 Feb  3 18:05 log.48431096._002705.job.log.tgz.1
[2026-02-03 18:06:41] -rw------- 1 boinc boinc      6304 Feb  3 18:05 heartbeat.json
[2026-02-03 18:06:41] -rw------- 1 boinc boinc        95 Feb  3 18:06 pilot_heartbeat.json
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc        27 Feb  3 18:06 wrapper_checkpoint.txt
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc      8192 Feb  3 18:06 boinc_mmap_file
[2026-02-03 18:06:41] -rw------- 1 boinc boinc      4934 Feb  3 18:06 pilotlog.txt
[2026-02-03 18:06:41] -rw------- 1 boinc boinc   1065468 Feb  3 18:06 log.48431096._002705.job.log.1
[2026-02-03 18:06:41] -rw------- 1 boinc boinc       357 Feb  3 18:06 output.list
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc       620 Feb  3 18:06 runtime_log
[2026-02-03 18:06:41] -rw------- 1 boinc boinc   1413120 Feb  3 18:06 result.tar.gz
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc      8916 Feb  3 18:06 runtime_log.err
[2026-02-03 18:06:41] -rw------- 1 boinc boinc       661 Feb  3 18:06 M3sLDmCSH78n9Rq4apOajLDm4fhM0noT9bVooX4SDmULTKDmDOybHm.diag
[2026-02-03 18:06:41] -rw-r--r-- 1 boinc boinc      9755 Feb  3 18:06 stderr.txt
[2026-02-03 18:06:41] HITS file was successfully produced:
[2026-02-03 18:06:41] -rw------- 1 boinc boinc 284321661 Feb  3 18:05 shared/HITS.pool.root.1
[2026-02-03 18:06:41]  *** Contents of shared directory: ***
[2026-02-03 18:06:41] total 947648
[2026-02-03 18:06:41] -rw-r--r-- 2 boinc boinc 684031048 Feb  3 16:02 ATLAS.root_0
[2026-02-03 18:06:41] -rw-r--r-- 2 boinc boinc    597771 Feb  3 16:02 input.tar.gz
[2026-02-03 18:06:41] -rw-r--r-- 2 boinc boinc     15845 Feb  3 16:02 start_atlas.sh
[2026-02-03 18:06:41] -rw------- 1 boinc boinc 284321661 Feb  3 18:05 HITS.pool.root.1
[2026-02-03 18:06:41] -rw------- 1 boinc boinc   1413120 Feb  3 18:06 result.tar.gz
18:06:42 (1337572): run_atlas exited; CPU time 21317.513925
18:06:42 (1337572): called boinc_finish(0)

</stderr_txt>
]]>

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