Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:23 (2718646): wrapper (7.7.26015): starting
13:21:23 (2718646): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 13:21:23] Arguments: --nthreads 3
[2026-02-03 13:21:23] Threads: 3
[2026-02-03 13:21:23] Checking for CVMFS
[2026-02-03 13:21:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 13:21:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 13:21:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 13:21:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 13:21:23] 2.9.2.0 1381994 8439 88048 155828 3 50 26363764 36864001 0 130560 0 3841165 99.985 289310 18349 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-03 13:21:23] CVMFS is ok
[2026-02-03 13:21:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 13:21:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 13:21:23] Further information can be found at the LHC@home message board.
[2026-02-03 13:21:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 13:21:23] Checking for apptainer binary...
[2026-02-03 13:21:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 13:21:23] Running /usr/bin/apptainer --version
[2026-02-03 13:21:24] apptainer version 1.4.1-1.1
[2026-02-03 13:21:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 13:21:24] magicA161a
[2026-02-03 13:21:24] apptainer works
[2026-02-03 13:21:24] Set ATHENA_PROC_NUMBER=3
[2026-02-03 13:21:24] Set ATHENA_CORE_NUMBER=3
[2026-02-03 13:21:24] Starting ATLAS job with PandaID=6997218997
[2026-02-03 13:21:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 14:49:06]  *** The last 200 lines of the pilot log: ***
[2026-02-03 14:49:06] 2026-02-03 13:48:36,587 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 14:49:06] 2026-02-03 13:48:36,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 14:49:06] 2026-02-03 13:48:36,587 | INFO     | will abort loop
[2026-02-03 14:49:06] 2026-02-03 13:48:36,966 | INFO     | all data control threads have been joined
[2026-02-03 14:49:06] 2026-02-03 13:48:37,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 14:49:06] 2026-02-03 13:48:37,558 | INFO     | all job control threads have been joined
[2026-02-03 14:49:06] 2026-02-03 13:48:37,565 | INFO     | [job] retrieve thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:37,565 | INFO     | [job] queue monitor thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:37,592 | INFO     | [job] job monitor thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:37,688 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:37,852 | INFO     | all payload control threads have been joined
[2026-02-03 14:49:06] 2026-02-03 13:48:37,912 | INFO     | [payload] validate_post thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:37,971 | INFO     | [data] control thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:38,026 | INFO     | [job] validate thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:38,070 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:38,111 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:38,247 | INFO     | [data] copytool_in thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:38,563 | INFO     | [job] control thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:38,858 | INFO     | [payload] control thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:38,930 | INFO     | [payload] failed_post thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:39,020 | INFO     | [data] copytool_out thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:39,298 | INFO     | job.realtimelogging is not enabled
[2026-02-03 14:49:06] 2026-02-03 13:48:40,304 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:40,567 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 14:49:06] 2026-02-03 13:48:40,740 | INFO     | [monitor] cgroup control has ended
[2026-02-03 14:49:06] 2026-02-03 13:48:41,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639575553856)>', '<ExcThread(monitor, started 139638773638912)>']
[2026-02-03 14:49:06] 2026-02-03 13:48:46,030 | INFO     | all workflow threads have been joined
[2026-02-03 14:49:06] 2026-02-03 13:48:46,031 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 14:49:06] 2026-02-03 13:48:46,031 | INFO     | traces error code: 0
[2026-02-03 14:49:06] 2026-02-03 13:48:46,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 14:49:06] 2026-02-03 13:49:06,573 | INFO     | PID=2722688 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 14:49:06] 2026-02-03 13:49:06,573 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 14:49:06] 2026-02-03 13:49:06,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 14:49:06] 2026-02-03 13:49:06,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 14:49:06] 2026-02-03 13:49:06,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 14:49:06] 2026-02-03 13:49:06,574 | INFO     | [monitor] control thread has ended
[2026-02-03 14:49:06] 2026-02-03 13:49:06,618 [wrapper] ==== pilot stdout END ====
[2026-02-03 14:49:06] 2026-02-03 13:49:06,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 14:49:06] 2026-02-03 13:49:06,623 [wrapper] pilotpid: 2722688
[2026-02-03 14:49:06] 2026-02-03 13:49:06,625 [wrapper] Pilot exit status: 0
[2026-02-03 14:49:06] 2026-02-03 13:49:06,632 [wrapper] pandaids: 6997218997
[2026-02-03 14:49:06] 2026-02-03 13:49:06,647 [wrapper] cleanup supervisor_pilot 2732143 2722689
[2026-02-03 14:49:06] 2026-02-03 13:49:06,650 [wrapper] Test setup, not cleaning
[2026-02-03 14:49:06] 2026-02-03 13:49:06,652 [wrapper] apfmon messages muted
[2026-02-03 14:49:06] 2026-02-03 13:49:06,654 [wrapper] ==== wrapper stdout END ====
[2026-02-03 14:49:06] 2026-02-03 13:49:06,656 [wrapper] ==== wrapper stderr END ====
[2026-02-03 14:49:06]  *** Error codes and diagnostics ***
[2026-02-03 14:49:06]     "exeErrorCode": 0,
[2026-02-03 14:49:06]     "exeErrorDiag": "",
[2026-02-03 14:49:06]     "pilotErrorCode": 0,
[2026-02-03 14:49:06]     "pilotErrorDiag": "",
[2026-02-03 14:49:06]  *** Listing of results directory ***
[2026-02-03 14:49:06] total 671128
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc    621528 Jan 14 12:27 pilot3.tar.gz
[2026-02-03 14:49:06] -rwx------ 1 boinc boinc     36322 Feb  2 18:59 runpilot2-wrapper.sh
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc      5111 Feb  2 19:01 queuedata.json
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc       100 Feb  3 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 14:49:06] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 13:21 run_atlas
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc       105 Feb  3 13:21 job.xml
[2026-02-03 14:49:06] -rw-r--r-- 2 boinc boinc 493892767 Feb  3 13:21 EVNT.48317949._000174.pool.root.1
[2026-02-03 14:49:06] -rw-r--r-- 2 boinc boinc    634114 Feb  3 13:21 input.tar.gz
[2026-02-03 14:49:06] -rw-r--r-- 2 boinc boinc     15845 Feb  3 13:21 start_atlas.sh
[2026-02-03 14:49:06] drwxrwx--x 2 boinc boinc      4096 Feb  3 13:21 shared
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc         0 Feb  3 13:21 boinc_setup_complete
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc      6448 Feb  3 13:21 init_data.xml
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc         0 Feb  3 13:21 boinc_lockfile
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc      2521 Feb  3 13:21 pandaJob.out
[2026-02-03 14:49:06] -rw------- 1 boinc boinc   1009250 Feb  3 13:21 agis_schedconf.cvmfs.json
[2026-02-03 14:49:06] -rw------- 1 boinc boinc   1511668 Feb  3 13:21 agis_ddmendpoints.agis.ALL.json
[2026-02-03 14:49:06] -rw------- 1 boinc boinc       426 Feb  3 13:21 workernode_map.json
[2026-02-03 14:49:06] drwx------ 5 boinc boinc      4096 Feb  3 13:21 pilot3
[2026-02-03 14:49:06] -rw------- 1 boinc boinc 187254239 Feb  3 14:48 HITS.48317952._009254.pool.root.1
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc       530 Feb  3 14:48 boinc_task_state.xml
[2026-02-03 14:49:06] -rw------- 1 boinc boinc      1016 Feb  3 14:48 memory_monitor_summary.json
[2026-02-03 14:49:06] -rw------- 1 boinc boinc    259679 Feb  3 14:48 log.48317952._009254.job.log.tgz.1
[2026-02-03 14:49:06] -rw------- 1 boinc boinc      6307 Feb  3 14:48 heartbeat.json
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc        27 Feb  3 14:49 wrapper_checkpoint.txt
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc      8192 Feb  3 14:49 boinc_mmap_file
[2026-02-03 14:49:06] -rw------- 1 boinc boinc        95 Feb  3 14:49 pilot_heartbeat.json
[2026-02-03 14:49:06] -rw------- 1 boinc boinc       747 Feb  3 14:49 pilotlog.txt
[2026-02-03 14:49:06] -rw------- 1 boinc boinc    789970 Feb  3 14:49 log.48317952._009254.job.log.1
[2026-02-03 14:49:06] -rw------- 1 boinc boinc       357 Feb  3 14:49 output.list
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc       620 Feb  3 14:49 runtime_log
[2026-02-03 14:49:06] -rw------- 1 boinc boinc   1064960 Feb  3 14:49 result.tar.gz
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc      8916 Feb  3 14:49 runtime_log.err
[2026-02-03 14:49:06] -rw------- 1 boinc boinc       661 Feb  3 14:49 CVOODmqND78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4LTKDmLXvkon.diag
[2026-02-03 14:49:06] -rw-r--r-- 1 boinc boinc      7140 Feb  3 14:49 stderr.txt
[2026-02-03 14:49:06] HITS file was successfully produced:
[2026-02-03 14:49:06] -rw------- 1 boinc boinc 187254239 Feb  3 14:48 shared/HITS.pool.root.1
[2026-02-03 14:49:06]  *** Contents of shared directory: ***
[2026-02-03 14:49:06] total 666872
[2026-02-03 14:49:06] -rw-r--r-- 2 boinc boinc 493892767 Feb  3 13:21 ATLAS.root_0
[2026-02-03 14:49:06] -rw-r--r-- 2 boinc boinc    634114 Feb  3 13:21 input.tar.gz
[2026-02-03 14:49:06] -rw-r--r-- 2 boinc boinc     15845 Feb  3 13:21 start_atlas.sh
[2026-02-03 14:49:06] -rw------- 1 boinc boinc 187254239 Feb  3 14:48 HITS.pool.root.1
[2026-02-03 14:49:06] -rw------- 1 boinc boinc   1064960 Feb  3 14:49 result.tar.gz
14:49:08 (2718646): run_atlas exited; CPU time 14973.237433
14:49:08 (2718646): called boinc_finish(0)

</stderr_txt>
]]>

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