Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:34:42 (23820): wrapper (7.7.26015): starting
12:34:42 (23820): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 12:34:42] Arguments: --nthreads 8
[2026-02-03 12:34:42] Threads: 8
[2026-02-03 12:34:42] Checking for CVMFS
[2026-02-03 12:34:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 12:34:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 12:34:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 12:34:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 12:34:48] 2.11.2.0 23754 71361 137264 155828 3 53 24255059 25165824 96 130560 0 16841752 99.761 16992567 2921 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-03 12:34:48] CVMFS is ok
[2026-02-03 12:34:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 12:34:48] Checking for apptainer binary...
[2026-02-03 12:34:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 12:34:48] Running /usr/bin/apptainer --version
[2026-02-03 12:34:48] apptainer version 1.3.2-1.el7
[2026-02-03 12:34:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 12:35:17] cg-vwn493.simple-grid.lan
[2026-02-03 12:35:17] apptainer works
[2026-02-03 12:35:17] Set ATHENA_PROC_NUMBER=8
[2026-02-03 12:35:17] Set ATHENA_CORE_NUMBER=8
[2026-02-03 12:35:17] Starting ATLAS job with PandaID=6997546675
[2026-02-03 12:35:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 17:59:28]  *** The last 200 lines of the pilot log: ***
[2026-02-03 17:59:28] 2026-02-03 16:58:45,064 | INFO     | log transfer has been attempted: DONE
[2026-02-03 17:59:28] 2026-02-03 16:58:45,064 | INFO     | job 6997546675 has finished - writing final server update
[2026-02-03 17:59:28] 2026-02-03 16:58:45,065 | INFO     | total number of processed events: 400 (read)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,067 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6997546675/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,067 | INFO     | extracted standard info from prmon json
[2026-02-03 17:59:28] 2026-02-03 16:58:45,067 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 17:59:28] 2026-02-03 16:58:45,068 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 17:59:28] 2026-02-03 16:58:45,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 17:59:28] 2026-02-03 16:58:45,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 17:59:28] 2026-02-03 16:58:45,074 | INFO     | fitting pss+swap vs Time
[2026-02-03 17:59:28] 2026-02-03 16:58:45,074 | INFO     | sum of square deviations: 8971993338.0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,082 | INFO     | sum of deviations: 113584166903.00003
[2026-02-03 17:59:28] 2026-02-03 16:58:45,083 | INFO     | mean x: 1770128544.0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,083 | INFO     | mean y: 2504883.5472312705
[2026-02-03 17:59:28] 2026-02-03 16:58:45,083 | INFO     | intersect: -22407072164.386642
[2026-02-03 17:59:28] 2026-02-03 16:58:45,083 | INFO     | chi2: 8.397892701930566
[2026-02-03 17:59:28] 2026-02-03 16:58:45,084 | INFO     | sum of square deviations: 8540720135.5
[2026-02-03 17:59:28] 2026-02-03 16:58:45,087 | INFO     | sum of deviations: 132494983632.0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,087 | INFO     | mean x: 1770128391.5
[2026-02-03 17:59:28] 2026-02-03 16:58:45,087 | INFO     | mean y: 2511473.695364238
[2026-02-03 17:59:28] 2026-02-03 16:58:45,087 | INFO     | intersect: -27458068961.8443
[2026-02-03 17:59:28] 2026-02-03 16:58:45,088 | INFO     | chi2: 7.691415208933373
[2026-02-03 17:59:28] 2026-02-03 16:58:45,088 | INFO     | current chi2=7.691415208933373 (change=8.412556793382024 %)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,088 | INFO     | right removable region: 301
[2026-02-03 17:59:28] 2026-02-03 16:58:45,088 | INFO     | sum of square deviations: 8540720135.5
[2026-02-03 17:59:28] 2026-02-03 16:58:45,091 | INFO     | sum of deviations: 4031391393.499996
[2026-02-03 17:59:28] 2026-02-03 16:58:45,091 | INFO     | mean x: 1770128696.5
[2026-02-03 17:59:28] 2026-02-03 16:58:45,091 | INFO     | mean y: 2543602.2549668876
[2026-02-03 17:59:28] 2026-02-03 16:58:45,091 | INFO     | intersect: -832992684.9950894
[2026-02-03 17:59:28] 2026-02-03 16:58:45,092 | INFO     | chi2: 3.4906011820791725
[2026-02-03 17:59:28] 2026-02-03 16:58:45,092 | INFO     | current chi2=3.4906011820791725 (change=58.4347966094312 %)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,093 | INFO     | sum of square deviations: 8123493708.0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,095 | INFO     | sum of deviations: -72975919427.99998
[2026-02-03 17:59:28] 2026-02-03 16:58:45,095 | INFO     | mean x: 1770128849.0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,095 | INFO     | mean y: 2571704.9966329965
[2026-02-03 17:59:28] 2026-02-03 16:58:45,096 | INFO     | intersect: 15904200352.112999
[2026-02-03 17:59:28] 2026-02-03 16:58:45,096 | INFO     | chi2: 1.132262017168737
[2026-02-03 17:59:28] 2026-02-03 16:58:45,096 | INFO     | current chi2=1.132262017168737 (change=67.56254988447846 %)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,097 | INFO     | sum of square deviations: 7720081493.0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,099 | INFO     | sum of deviations: -86133253946.5
[2026-02-03 17:59:28] 2026-02-03 16:58:45,099 | INFO     | mean x: 1770129001.5
[2026-02-03 17:59:28] 2026-02-03 16:58:45,099 | INFO     | mean y: 2576653.3184931506
[2026-02-03 17:59:28] 2026-02-03 16:58:45,100 | INFO     | intersect: 19751975794.05422
[2026-02-03 17:59:28] 2026-02-03 16:58:45,100 | INFO     | chi2: 1.011757633464327
[2026-02-03 17:59:28] 2026-02-03 16:58:45,100 | INFO     | current chi2=1.011757633464327 (change=10.642800153778508 %)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,100 | INFO     | left removable region: 30
[2026-02-03 17:59:28] 2026-02-03 16:58:45,106 | INFO     | sum of square deviations: 6171352920.0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,108 | INFO     | sum of deviations: -38935519138.99999
[2026-02-03 17:59:28] 2026-02-03 16:58:45,108 | INFO     | mean x: 1770129276.0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,108 | INFO     | mean y: 2573983.4317343174
[2026-02-03 17:59:28] 2026-02-03 16:58:45,109 | INFO     | intersect: 11170449682.266699
[2026-02-03 17:59:28] 2026-02-03 16:58:45,109 | INFO     | chi2: 0.1862715703105543
[2026-02-03 17:59:28] 2026-02-03 16:58:45,109 | INFO     | current memory leak: -6.31 B/s (using 271 data points, chi2=0.19)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,110 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,110 | INFO     | ..............................
[2026-02-03 17:59:28] 2026-02-03 16:58:45,110 | INFO     | . Timing measurements:
[2026-02-03 17:59:28] 2026-02-03 16:58:45,110 | INFO     | . get job = 0 s
[2026-02-03 17:59:28] 2026-02-03 16:58:45,110 | INFO     | . initial setup = 123 s
[2026-02-03 17:59:28] 2026-02-03 16:58:45,110 | INFO     | . payload setup = 156 s
[2026-02-03 17:59:28] 2026-02-03 16:58:45,110 | INFO     | . stage-in = 0 s
[2026-02-03 17:59:28] 2026-02-03 16:58:45,110 | INFO     | . payload execution = 18838 s
[2026-02-03 17:59:28] 2026-02-03 16:58:45,111 | INFO     | . stage-out = 4 s
[2026-02-03 17:59:28] 2026-02-03 16:58:45,111 | INFO     | . log creation = 2 s
[2026-02-03 17:59:28] 2026-02-03 16:58:45,111 | INFO     | ..............................
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | 
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | job summary report
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | --------------------------------------------------
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | PanDA job id: 6997546675
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | task id: 48431080
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | errors: (none)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | pilot state: finished 
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | transexitcode: 0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,386 | INFO     | exeerrorcode: 0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | exeerrordiag: 
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | exitcode: 0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | exitmsg: OK
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | cpuconsumptiontime: 71447 s
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | nevents: 400
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | neventsw: 0
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | pid: 32265
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | pgrp: 32265
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | corecount: 8
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | event service: False
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | sizes: {0: 2277224, 1: 2277909, 2: 2278370, 13: 2278370, 18999: 2311054, 19005: 2320052, 19008: 2320430}
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | --------------------------------------------------
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | 
[2026-02-03 17:59:28] 2026-02-03 16:58:45,387 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-03 17:59:28] 2026-02-03 16:58:45,986 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,989 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 17:59:28] 2026-02-03 16:58:45,989 | INFO     | job 6997546675 has completed (purged errors)
[2026-02-03 17:59:28] 2026-02-03 16:58:45,989 | INFO     | overall cleanup function is called
[2026-02-03 17:59:28] 2026-02-03 16:58:46,998 | INFO     | --- collectZombieJob: --- 10, [32265]
[2026-02-03 17:59:28] 2026-02-03 16:58:46,998 | INFO     | zombie collector waiting for pid 32265
[2026-02-03 17:59:28] 2026-02-03 16:58:46,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 17:59:28] 2026-02-03 16:58:46,998 | INFO     | collected zombie processes
[2026-02-03 17:59:28] 2026-02-03 16:58:46,998 | INFO     | will attempt to kill all subprocesses of pid=32265
[2026-02-03 17:59:28] 2026-02-03 16:58:47,071 | INFO     | process IDs to be killed: [32265] (in reverse order)
[2026-02-03 17:59:28] 2026-02-03 16:58:47,799 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 17:59:28] 2026-02-03 16:58:47,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 17:59:28] 2026-02-03 16:58:47,802 | INFO     | did not find any defunct processes belonging to 32265
[2026-02-03 17:59:28] 2026-02-03 16:58:47,803 | INFO     | did not find any defunct processes belonging to 32265
[2026-02-03 17:59:28] 2026-02-03 16:58:47,803 | INFO     | ready for new job
[2026-02-03 17:59:28] 2026-02-03 16:58:47,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 17:59:28] 2026-02-03 16:58:47,810 | INFO     | **************************************
[2026-02-03 17:59:28] 2026-02-03 16:58:47,810 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 17:59:28] 2026-02-03 16:58:47,810 | INFO     | **************************************
[2026-02-03 17:59:28] 2026-02-03 16:58:47,810 | INFO     | 
[2026-02-03 17:59:28] 2026-02-03 16:58:47,811 | INFO     | pilot is running in a VM
[2026-02-03 17:59:28] 2026-02-03 16:58:47,811 | INFO     | architecture information:
[2026-02-03 17:59:28] 2026-02-03 16:58:47,819 | INFO     | executing command: cat /etc/os-release
[2026-02-03 17:59:28] 2026-02-03 16:58:48,129 | INFO     | cat /etc/os-release:
[2026-02-03 17:59:28] NAME="CentOS Linux"
[2026-02-03 17:59:28] VERSION="7 (Core)"
[2026-02-03 17:59:28] ID="centos"
[2026-02-03 17:59:28] ID_LIKE="rhel fedora"
[2026-02-03 17:59:28] VERSION_ID="7"
[2026-02-03 17:59:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 17:59:28] ANSI_COLOR="0;31"
[2026-02-03 17:59:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 17:59:28] HOME_URL="https://www.centos.org/"
[2026-02-03 17:59:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 17:59:28] 
[2026-02-03 17:59:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 17:59:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 17:59:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 17:59:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 17:59:28] 
[2026-02-03 17:59:28] 2026-02-03 16:58:48,129 | INFO     | **************************************
[2026-02-03 17:59:28] 2026-02-03 16:58:48,633 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-03 17:59:28] 2026-02-03 16:58:48,962 | INFO     | sufficient remaining disk space (495364079616 B)
[2026-02-03 17:59:28] 2026-02-03 16:58:48,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 17:59:28] 2026-02-03 16:58:48,963 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 17:59:28] 2026-02-03 16:58:48,963 | INFO     | update_server=False
[2026-02-03 17:59:28] 2026-02-03 16:58:48,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 17:59:28] 2026-02-03 16:58:49,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 17:59:28] 2026-02-03 16:58:49,428 | INFO     | aborting loop
[2026-02-03 17:59:28] 2026-02-03 16:58:49,597 | INFO     | all data control threads have been joined
[2026-02-03 17:59:28] 2026-02-03 16:58:49,826 | INFO     | all job control threads have been joined
[2026-02-03 17:59:28] 2026-02-03 16:58:49,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 17:59:28] 2026-02-03 16:58:49,969 | INFO     | [job] retrieve thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,055 | INFO     | [job] validate thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,194 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 17:59:28] 2026-02-03 16:58:50,281 | INFO     | [data] copytool_in thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,390 | INFO     | all payload control threads have been joined
[2026-02-03 17:59:28] 2026-02-03 16:58:50,409 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,434 | INFO     | [job] job monitor thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,603 | INFO     | [data] control thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,638 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,639 | INFO     | [payload] validate_post thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,832 | INFO     | [job] control thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:50,910 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:51,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 17:59:28] 2026-02-03 16:58:51,261 | INFO     | [job] queue monitor thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:51,396 | INFO     | [payload] control thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:51,434 | INFO     | [payload] failed_post thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:51,937 | INFO     | [data] copytool_out thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:58:55,049 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 17:59:28] 2026-02-03 16:59:16,324 | INFO     | [monitor] cgroup control has ended
[2026-02-03 17:59:28] 2026-02-03 16:59:17,547 | INFO     | PID=27808 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 17:59:28] 2026-02-03 16:59:17,547 | INFO     | .. there are 2 such processes running
[2026-02-03 17:59:28] 2026-02-03 16:59:17,548 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 17:59:28] 2026-02-03 16:59:17,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 17:59:28] 2026-02-03 16:59:17,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 17:59:28] 2026-02-03 16:59:17,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459291420480)>', '<ExcThread(monitor, started 140458583914240)>']
[2026-02-03 17:59:28] 2026-02-03 16:59:18,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 17:59:28] 2026-02-03 16:59:18,557 | INFO     | [monitor] control thread has ended
[2026-02-03 17:59:28] 2026-02-03 16:59:22,773 | INFO     | all workflow threads have been joined
[2026-02-03 17:59:28] 2026-02-03 16:59:22,773 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 17:59:28] 2026-02-03 16:59:22,773 | INFO     | traces error code: 0
[2026-02-03 17:59:28] 2026-02-03 16:59:22,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 17:59:28] 2026-02-03 16:59:23,182 [wrapper] ==== pilot stdout END ====
[2026-02-03 17:59:28] 2026-02-03 16:59:23,281 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 17:59:28] 2026-02-03 16:59:23,396 [wrapper] pilotpid: 27808
[2026-02-03 17:59:28] 2026-02-03 16:59:23,521 [wrapper] Pilot exit status: 0
[2026-02-03 17:59:28] 2026-02-03 16:59:24,043 [wrapper] pandaids: 6997546675
[2026-02-03 17:59:28] 2026-02-03 16:59:25,130 [wrapper] cleanup supervisor_pilot  6581 27809
[2026-02-03 17:59:28] 2026-02-03 16:59:25,254 [wrapper] Test setup, not cleaning
[2026-02-03 17:59:28] 2026-02-03 16:59:25,367 [wrapper] apfmon messages muted
[2026-02-03 17:59:28] 2026-02-03 16:59:25,440 [wrapper] ==== wrapper stdout END ====
[2026-02-03 17:59:28] 2026-02-03 16:59:25,555 [wrapper] ==== wrapper stderr END ====
[2026-02-03 17:59:28]  *** Error codes and diagnostics ***
[2026-02-03 17:59:28]     "exeErrorCode": 0,
[2026-02-03 17:59:28]     "exeErrorDiag": "",
[2026-02-03 17:59:28]     "pilotErrorCode": 0,
[2026-02-03 17:59:28]     "pilotErrorDiag": "",
[2026-02-03 17:59:28]  *** Listing of results directory ***
[2026-02-03 17:59:28] total 889648
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc    584422 Feb  2 21:18 pilot3.tar.gz
[2026-02-03 17:59:28] -rwx------. 1 boinc boinc     36322 Feb  2 21:19 runpilot2-wrapper.sh
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc      5111 Feb  2 21:21 queuedata.json
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc       100 Feb  3 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 17:59:28] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 12:34 run_atlas
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc       105 Feb  3 12:34 job.xml
[2026-02-03 17:59:28] -rw-r--r--. 2 boinc boinc 650004864 Feb  3 12:34 EVNT.48431078._000152.pool.root.1
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc      6390 Feb  3 12:34 init_data.xml
[2026-02-03 17:59:28] -rw-r--r--. 2 boinc boinc     15845 Feb  3 12:34 start_atlas.sh
[2026-02-03 17:59:28] drwxrwx--x. 2 boinc boinc        68 Feb  3 12:34 shared
[2026-02-03 17:59:28] -rw-r--r--. 2 boinc boinc    597764 Feb  3 12:34 input.tar.gz
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc         0 Feb  3 12:34 boinc_lockfile
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc      2557 Feb  3 12:35 pandaJob.out
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc       415 Feb  3 12:41 workernode_map.json
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc   1009250 Feb  3 12:41 agis_schedconf.cvmfs.json
[2026-02-03 17:59:28] drwx------. 5 boinc boinc      4096 Feb  3 12:41 pilot3
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc 250680254 Feb  3 17:57 HITS.48431080._007960.pool.root.1
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc       532 Feb  3 17:57 boinc_task_state.xml
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc      1012 Feb  3 17:58 memory_monitor_summary.json
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc   1511668 Feb  3 17:58 agis_ddmendpoints.agis.ALL.json
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc    532334 Feb  3 17:58 log.48431080._007960.job.log.tgz.1
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc      6317 Feb  3 17:58 heartbeat.json
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc      8192 Feb  3 17:59 boinc_mmap_file
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc        28 Feb  3 17:59 wrapper_checkpoint.txt
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc        95 Feb  3 17:59 pilot_heartbeat.json
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc      4880 Feb  3 17:59 pilotlog.txt
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc   2662268 Feb  3 17:59 log.48431080._007960.job.log.1
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc       357 Feb  3 17:59 output.list
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc       620 Feb  3 17:59 runtime_log
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc   3215360 Feb  3 17:59 result.tar.gz
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc      8816 Feb  3 17:59 runtime_log.err
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc       655 Feb  3 17:59 ocJKDmgZF78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9TTKDmCoGjZn.diag
[2026-02-03 17:59:28] -rw-r--r--. 1 boinc boinc     20686 Feb  3 17:59 stderr.txt
[2026-02-03 17:59:28] HITS file was successfully produced:
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc 250680254 Feb  3 17:57 shared/HITS.pool.root.1
[2026-02-03 17:59:28]  *** Contents of shared directory: ***
[2026-02-03 17:59:28] total 883320
[2026-02-03 17:59:28] -rw-r--r--. 2 boinc boinc 650004864 Feb  3 12:34 ATLAS.root_0
[2026-02-03 17:59:28] -rw-r--r--. 2 boinc boinc     15845 Feb  3 12:34 start_atlas.sh
[2026-02-03 17:59:28] -rw-r--r--. 2 boinc boinc    597764 Feb  3 12:34 input.tar.gz
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc 250680254 Feb  3 17:57 HITS.pool.root.1
[2026-02-03 17:59:28] -rw-------. 1 boinc boinc   3215360 Feb  3 17:59 result.tar.gz
17:59:29 (23820): run_atlas exited; CPU time 71646.347038
17:59:29 (23820): called boinc_finish(0)

</stderr_txt>
]]>

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