Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
18:00:57 (3729209): wrapper (7.7.26015): starting
18:00:57 (3729209): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 18:00:57] Arguments: --nthreads 4
[2026-02-02 18:00:57] Threads: 4
[2026-02-02 18:00:57] Checking for CVMFS
[2026-02-02 18:00:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 18:00:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 18:00:57] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 18:00:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 18:00:57] 2.12.7.0 687298 4099 63084 155812 2 188 5934814 6144001 2725 130560 0 6206949 99.995 155123 1238 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-02 18:00:57] CVMFS is ok
[2026-02-02 18:00:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 18:00:57] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-02 18:00:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-02 18:00:57] Further information can be found at the LHC@home message board.
[2026-02-02 18:00:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 18:00:57] Checking for apptainer binary...
[2026-02-02 18:00:57] apptainer is not installed, using version from CVMFS
[2026-02-02 18:00:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 18:00:57] k8plus
[2026-02-02 18:00:57] apptainer works
[2026-02-02 18:00:57] Set ATHENA_PROC_NUMBER=4
[2026-02-02 18:00:57] Set ATHENA_CORE_NUMBER=4
[2026-02-02 18:00:57] Starting ATLAS job with PandaID=6996291630
[2026-02-02 18:00:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 19:28:22]  *** The last 200 lines of the pilot log: ***
[2026-02-02 19:28:22]  guid=50c728ca-4280-4d6a-a629-9ed49a6348bd
[2026-02-02 19:28:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 19:28:22]  is_altstaged=None
[2026-02-02 19:28:22]  is_tar=False
[2026-02-02 19:28:22]  lfn=log.48310589._010795.job.log.tgz.1
[2026-02-02 19:28:22]  mtime=0
[2026-02-02 19:28:22]  protocol_id=None
[2026-02-02 19:28:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 19:28:22]  replicas=None
[2026-02-02 19:28:22]  scope=mc23_13p6TeV
[2026-02-02 19:28:22]  status=None
[2026-02-02 19:28:22]  status_code=0
[2026-02-02 19:28:22]  storage_token=
[2026-02-02 19:28:22]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-6996291630/log.48310589._010795.job.log.tgz.1
[2026-02-02 19:28:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/52/log.48310589._010795.job.log.tgz.1
[2026-02-02 19:28:22]  workdir=None
[2026-02-02 19:28:22] ]
[2026-02-02 19:28:22] 2026-02-03 03:27:40,441 | INFO     | transferring file log.48310589._010795.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-6996291630/log.48310589._010795.job.log.tgz.1 to /var/lib/boinc
[2026-02-02 19:28:22] 2026-02-03 03:27:40,441 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6996291630/log.48310589._010795.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.483105
[2026-02-02 19:28:22] 2026-02-03 03:27:40,452 | INFO     | adding to output.list: log.48310589._010795.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/52/log.48310589._010795.job.log.tg
[2026-02-02 19:28:22] 2026-02-03 03:27:40,452 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 19:28:22] 2026-02-03 03:27:40,452 | INFO     | summary of transferred files:
[2026-02-02 19:28:22] 2026-02-03 03:27:40,452 | INFO     |  -- lfn=log.48310589._010795.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 19:28:22] 2026-02-03 03:27:40,452 | INFO     | stage-out finished correctly
[2026-02-02 19:28:22] 2026-02-03 03:27:41,718 | INFO     | time since job start (5193s) is within the limit (349056.0s)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,085 | INFO     | monitor loop #394: job 0:6996291630 is in state 'finished'
[2026-02-02 19:28:22] 2026-02-03 03:27:42,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,514 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 19:28:22] 2026-02-03 03:27:42,560 | INFO     | job 6996291630 has state=finished
[2026-02-02 19:28:22] 2026-02-03 03:27:42,561 | INFO     | preparing for final server update for job 6996291630 in state='finished'
[2026-02-02 19:28:22] 2026-02-03 03:27:42,561 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-6996291630/jobReport.json
[2026-02-02 19:28:22] 2026-02-03 03:27:42,562 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-02-02 19:28:22] 2026-02-03 03:27:42,562 | INFO     | this job has now completed (state=finished)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,562 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,562 | INFO     | log transfer has been attempted: DONE
[2026-02-02 19:28:22] 2026-02-03 03:27:42,562 | INFO     | job 6996291630 has finished - writing final server update
[2026-02-02 19:28:22] 2026-02-03 03:27:42,563 | INFO     | total number of processed events: 400 (read)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,564 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6996291630/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,565 | INFO     | extracted standard info from prmon json
[2026-02-02 19:28:22] 2026-02-03 03:27:42,565 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 19:28:22] 2026-02-03 03:27:42,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 19:28:22] 2026-02-03 03:27:42,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 19:28:22] 2026-02-03 03:27:42,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 19:28:22] 2026-02-03 03:27:42,566 | INFO     | fitting pss+swap vs Time
[2026-02-02 19:28:22] 2026-02-03 03:27:42,566 | INFO     | sum of square deviations: 147126479.5
[2026-02-02 19:28:22] 2026-02-03 03:27:42,566 | INFO     | sum of deviations: -2736139627.9999995
[2026-02-02 19:28:22] 2026-02-03 03:27:42,566 | INFO     | mean x: 1770086738.5
[2026-02-02 19:28:22] 2026-02-03 03:27:42,566 | INFO     | mean y: 2357114.2564102565
[2026-02-02 19:28:22] 2026-02-03 03:27:42,566 | INFO     | intersect: 32921002939.715195
[2026-02-02 19:28:22] 2026-02-03 03:27:42,566 | INFO     | chi2: 0.018241059169595196
[2026-02-02 19:28:22] 2026-02-03 03:27:42,566 | INFO     | current memory leak: -18.60 B/s (using 78 data points, chi2=0.02)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | could have reported an average CPU frequency of 4137 MHz (6 samples)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | ..............................
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | . Timing measurements:
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | . get job = 0 s
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | . initial setup = 6 s
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | . payload setup = 2 s
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | . stage-in = 0 s
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | . payload execution = 5174 s
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | . stage-out = 0 s
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | . log creation = 0 s
[2026-02-02 19:28:22] 2026-02-03 03:27:42,567 | INFO     | ..............................
[2026-02-02 19:28:22] 2026-02-03 03:27:42,613 | INFO     | 
[2026-02-02 19:28:22] 2026-02-03 03:27:42,613 | INFO     | job summary report
[2026-02-02 19:28:22] 2026-02-03 03:27:42,613 | INFO     | --------------------------------------------------
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | PanDA job id: 6996291630
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | task id: 48310589
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | errors: (none)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | pilot state: finished 
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | transexitcode: 0
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | exeerrorcode: 0
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | exeerrordiag: 
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | exitcode: 0
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | exitmsg: OK
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | cpuconsumptiontime: 19898 s
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | nevents: 400
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | neventsw: 0
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | pid: 3737553
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | pgrp: 3737553
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | corecount: 4
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | event service: False
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | sizes: {0: 2278286, 11: 2278286, 5180: 2304756, 5181: 2313768, 5183: 2314018}
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | --------------------------------------------------
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | 
[2026-02-02 19:28:22] 2026-02-03 03:27:42,614 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,627 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,627 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 19:28:22] 2026-02-03 03:27:42,627 | INFO     | job 6996291630 has completed (purged errors)
[2026-02-02 19:28:22] 2026-02-03 03:27:42,627 | INFO     | overall cleanup function is called
[2026-02-02 19:28:22] 2026-02-03 03:27:43,634 | INFO     | --- collectZombieJob: --- 10, [3737553]
[2026-02-02 19:28:22] 2026-02-03 03:27:43,634 | INFO     | zombie collector waiting for pid 3737553
[2026-02-02 19:28:22] 2026-02-03 03:27:43,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 19:28:22] 2026-02-03 03:27:43,634 | INFO     | collected zombie processes
[2026-02-02 19:28:22] 2026-02-03 03:27:43,634 | INFO     | will attempt to kill all subprocesses of pid=3737553
[2026-02-02 19:28:22] 2026-02-03 03:27:43,710 | INFO     | process IDs to be killed: [3737553] (in reverse order)
[2026-02-02 19:28:22] 2026-02-03 03:27:43,747 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 19:28:22] 2026-02-03 03:27:43,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 19:28:22] 2026-02-03 03:27:43,751 | INFO     | did not find any defunct processes belonging to 3737553
[2026-02-02 19:28:22] 2026-02-03 03:27:43,753 | INFO     | did not find any defunct processes belonging to 3737553
[2026-02-02 19:28:22] 2026-02-03 03:27:43,753 | INFO     | ready for new job
[2026-02-02 19:28:22] 2026-02-03 03:27:43,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 19:28:22] 2026-02-03 03:27:43,754 | INFO     | **************************************
[2026-02-02 19:28:22] 2026-02-03 03:27:43,754 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 19:28:22] 2026-02-03 03:27:43,754 | INFO     | **************************************
[2026-02-02 19:28:22] 2026-02-03 03:27:43,754 | INFO     | 
[2026-02-02 19:28:22] 2026-02-03 03:27:43,755 | INFO     | architecture information:
[2026-02-02 19:28:22] 2026-02-03 03:27:43,755 | INFO     | executing command: cat /etc/os-release
[2026-02-02 19:28:22] 2026-02-03 03:27:43,763 | INFO     | cat /etc/os-release:
[2026-02-02 19:28:22] NAME="CentOS Linux"
[2026-02-02 19:28:22] VERSION="7 (Core)"
[2026-02-02 19:28:22] ID="centos"
[2026-02-02 19:28:22] ID_LIKE="rhel fedora"
[2026-02-02 19:28:22] VERSION_ID="7"
[2026-02-02 19:28:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 19:28:22] ANSI_COLOR="0;31"
[2026-02-02 19:28:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 19:28:22] HOME_URL="https://www.centos.org/"
[2026-02-02 19:28:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 19:28:22] 
[2026-02-02 19:28:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 19:28:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 19:28:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 19:28:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 19:28:22] 
[2026-02-02 19:28:22] 2026-02-03 03:27:43,764 | INFO     | **************************************
[2026-02-02 19:28:22] 2026-02-03 03:27:44,267 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-02-02 19:28:22] 2026-02-03 03:27:44,277 | INFO     | sufficient remaining disk space (102293831680 B)
[2026-02-02 19:28:22] 2026-02-03 03:27:44,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 19:28:22] 2026-02-03 03:27:44,277 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 19:28:22] 2026-02-03 03:27:44,277 | INFO     | update_server=False
[2026-02-02 19:28:22] 2026-02-03 03:27:44,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 19:28:22] 2026-02-03 03:27:44,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 19:28:22] 2026-02-03 03:27:44,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 19:28:22] 2026-02-03 03:27:44,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 19:28:22] 2026-02-03 03:27:44,500 | INFO     | all data control threads have been joined
[2026-02-02 19:28:22] 2026-02-03 03:27:44,588 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 19:28:22] 2026-02-03 03:27:44,588 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 19:28:22] 2026-02-03 03:27:44,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 19:28:22] 2026-02-03 03:27:44,588 | INFO     | will abort loop
[2026-02-02 19:28:22] 2026-02-03 03:27:44,632 | INFO     | all payload control threads have been joined
[2026-02-02 19:28:22] 2026-02-03 03:27:45,282 | INFO     | [job] retrieve thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:45,283 | INFO     | [job] queue monitor thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:45,505 | INFO     | [data] control thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:45,529 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:45,593 | INFO     | [job] job monitor thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:45,636 | INFO     | all job control threads have been joined
[2026-02-02 19:28:22] 2026-02-03 03:27:45,637 | INFO     | [payload] control thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:45,878 | INFO     | [payload] validate_post thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:45,913 | INFO     | [job] validate thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:45,993 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:46,134 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:46,261 | INFO     | [data] copytool_in thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:46,283 | INFO     | [data] copytool_out thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:46,622 | INFO     | [payload] failed_post thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:46,641 | INFO     | [job] control thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:48,283 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:27:54,589 | INFO     | job.realtimelogging is not enabled
[2026-02-02 19:28:22] 2026-02-03 03:27:55,594 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 19:28:22] 2026-02-03 03:28:14,871 | INFO     | PID=3732999 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 19:28:22] 2026-02-03 03:28:14,871 | INFO     | .. there are 4 such processes running
[2026-02-02 19:28:22] 2026-02-03 03:28:14,871 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 19:28:22] 2026-02-03 03:28:14,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 19:28:22] 2026-02-03 03:28:14,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 19:28:22] 2026-02-03 03:28:16,711 | INFO     | [monitor] cgroup control has ended
[2026-02-02 19:28:22] 2026-02-03 03:28:17,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135187201029952)>', '<ExcThread(monitor, started 135186796746496)>']
[2026-02-02 19:28:22] 2026-02-03 03:28:17,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 19:28:22] 2026-02-03 03:28:17,881 | INFO     | [monitor] control thread has ended
[2026-02-02 19:28:22] 2026-02-03 03:28:22,661 | INFO     | all workflow threads have been joined
[2026-02-02 19:28:22] 2026-02-03 03:28:22,661 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 19:28:22] 2026-02-03 03:28:22,661 | INFO     | traces error code: 0
[2026-02-02 19:28:22] 2026-02-03 03:28:22,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 19:28:22] 2026-02-03 03:28:22,735 [wrapper] ==== pilot stdout END ====
[2026-02-02 19:28:22] 2026-02-03 03:28:22,736 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 19:28:22] 2026-02-03 03:28:22,738 [wrapper] pilotpid: 3732999
[2026-02-02 19:28:22] 2026-02-03 03:28:22,739 [wrapper] Pilot exit status: 0
[2026-02-02 19:28:22] 2026-02-03 03:28:22,745 [wrapper] pandaids: 6996291630
[2026-02-02 19:28:22] 2026-02-03 03:28:22,768 [wrapper] cleanup supervisor_pilot 3771457 3733000
[2026-02-02 19:28:22] 2026-02-03 03:28:22,770 [wrapper] Test setup, not cleaning
[2026-02-02 19:28:22] 2026-02-03 03:28:22,771 [wrapper] apfmon messages muted
[2026-02-02 19:28:22] 2026-02-03 03:28:22,773 [wrapper] ==== wrapper stdout END ====
[2026-02-02 19:28:22] 2026-02-03 03:28:22,774 [wrapper] ==== wrapper stderr END ====
[2026-02-02 19:28:22]  *** Error codes and diagnostics ***
[2026-02-02 19:28:22]     "exeErrorCode": 0,
[2026-02-02 19:28:22]     "exeErrorDiag": "",
[2026-02-02 19:28:22]     "pilotErrorCode": 0,
[2026-02-02 19:28:22]     "pilotErrorDiag": "",
[2026-02-02 19:28:22]  *** Listing of results directory ***
[2026-02-02 19:28:22] total 664808
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc    584422 Feb  1 11:04 pilot3.tar.gz
[2026-02-02 19:28:22] -rwx------ 1 boinc boinc     36322 Feb  1 11:05 runpilot2-wrapper.sh
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc      5111 Feb  1 11:06 queuedata.json
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc       100 Feb  2 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 19:28:22] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 18:00 run_atlas
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc       105 Feb  2 18:00 job.xml
[2026-02-02 19:28:22] -rw-r--r-- 2 boinc boinc 495254841 Feb  2 18:00 EVNT.48310585._000205.pool.root.1
[2026-02-02 19:28:22] -rw-r--r-- 2 boinc boinc    597757 Feb  2 18:00 input.tar.gz
[2026-02-02 19:28:22] drwxrwx--x 2 boinc boinc      4096 Feb  2 18:00 shared
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc         0 Feb  2 18:00 boinc_setup_complete
[2026-02-02 19:28:22] -rw-r--r-- 2 boinc boinc     15845 Feb  2 18:00 start_atlas.sh
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc      7298 Feb  2 18:00 init_data.xml
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc         0 Feb  2 18:00 boinc_lockfile
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc      2529 Feb  2 18:00 pandaJob.out
[2026-02-02 19:28:22] -rw------- 1 boinc boinc   1009308 Feb  2 18:01 agis_schedconf.cvmfs.json
[2026-02-02 19:28:22] -rw------- 1 boinc boinc   1511668 Feb  2 18:01 agis_ddmendpoints.agis.ALL.json
[2026-02-02 19:28:22] -rw------- 1 boinc boinc       426 Feb  2 18:01 workernode_map.json
[2026-02-02 19:28:22] drwx------ 5 boinc boinc      4096 Feb  2 18:01 pilot3
[2026-02-02 19:28:22] -rw------- 1 boinc boinc 179493654 Feb  2 19:27 HITS.48310589._010795.pool.root.1
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc       530 Feb  2 19:27 boinc_task_state.xml
[2026-02-02 19:28:22] -rw------- 1 boinc boinc      1026 Feb  2 19:27 memory_monitor_summary.json
[2026-02-02 19:28:22] -rw------- 1 boinc boinc    259074 Feb  2 19:27 log.48310589._010795.job.log.tgz.1
[2026-02-02 19:28:22] -rw------- 1 boinc boinc      6314 Feb  2 19:27 heartbeat.json
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc      8192 Feb  2 19:27 boinc_mmap_file
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc        27 Feb  2 19:27 wrapper_checkpoint.txt
[2026-02-02 19:28:22] -rw------- 1 boinc boinc        95 Feb  2 19:28 pilot_heartbeat.json
[2026-02-02 19:28:22] -rw------- 1 boinc boinc      5085 Feb  2 19:28 pilotlog.txt
[2026-02-02 19:28:22] -rw------- 1 boinc boinc    774618 Feb  2 19:28 log.48310589._010795.job.log.1
[2026-02-02 19:28:22] -rw------- 1 boinc boinc       357 Feb  2 19:28 output.list
[2026-02-02 19:28:22] -rw------- 1 boinc boinc   1054720 Feb  2 19:28 result.tar.gz
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc       620 Feb  2 19:28 runtime_log
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc      8907 Feb  2 19:28 runtime_log.err
[2026-02-02 19:28:22] -rw------- 1 boinc boinc       648 Feb  2 19:28 Yi7LDmBwr68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmw2QKDmGuX0Sn.diag
[2026-02-02 19:28:22] -rw-r--r-- 1 boinc boinc     21454 Feb  2 19:28 stderr.txt
[2026-02-02 19:28:22] HITS file was successfully produced:
[2026-02-02 19:28:22] -rw------- 1 boinc boinc 179493654 Feb  2 19:27 shared/HITS.pool.root.1
[2026-02-02 19:28:22]  *** Contents of shared directory: ***
[2026-02-02 19:28:22] total 660576
[2026-02-02 19:28:22] -rw-r--r-- 2 boinc boinc 495254841 Feb  2 18:00 ATLAS.root_0
[2026-02-02 19:28:22] -rw-r--r-- 2 boinc boinc    597757 Feb  2 18:00 input.tar.gz
[2026-02-02 19:28:22] -rw-r--r-- 2 boinc boinc     15845 Feb  2 18:00 start_atlas.sh
[2026-02-02 19:28:22] -rw------- 1 boinc boinc 179493654 Feb  2 19:27 HITS.pool.root.1
[2026-02-02 19:28:22] -rw------- 1 boinc boinc   1054720 Feb  2 19:28 result.tar.gz
19:28:24 (3729209): run_atlas exited; CPU time 19940.885467
19:28:24 (3729209): called boinc_finish(0)

</stderr_txt>
]]>

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