Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:05:26 (332487): wrapper (7.7.26015): starting
19:05:26 (332487): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 19:05:27] Arguments: --nthreads 8
[2026-02-02 19:05:27] Threads: 8
[2026-02-02 19:05:27] Checking for CVMFS
[2026-02-02 19:05:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 19:05:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 19:05:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 19:05:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 19:05:28] 2.11.3.0 733561 127183 220468 155813 2 548 35079555 45568000 14991 130560 0 755724703 99.814 437282400 20255 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-02-02 19:05:28] CVMFS is ok
[2026-02-02 19:05:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 19:05:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 19:05:28] Further information can be found at the LHC@home message board.
[2026-02-02 19:05:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 19:05:28] Checking for apptainer binary...
[2026-02-02 19:05:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 19:05:28] Running /usr/bin/apptainer --version
[2026-02-02 19:05:28] apptainer version 1.4.1-1.el9
[2026-02-02 19:05:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 19:05:28] wns0024.triumf.lcg
[2026-02-02 19:05:28] apptainer works
[2026-02-02 19:05:28] Set ATHENA_PROC_NUMBER=8
[2026-02-02 19:05:28] Set ATHENA_CORE_NUMBER=8
[2026-02-02 19:05:28] Starting ATLAS job with PandaID=6993667635
[2026-02-02 19:05:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 19:10:18]  *** The last 200 lines of the pilot log: ***
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 19:10:18] 2026-02-03 03:09:23,676 | WARNING  | wrong length of table data, x=[1770088021.0], y=[1357.0] (must be same and length>=4)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,696 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,696 | INFO     | ..............................
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . Timing measurements:
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . get job = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . initial setup = 20 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . payload setup = 24 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . stage-in = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . payload execution = 32 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . stage-out = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . log creation = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | ..............................
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993667635/pilotlog.txt
[2026-02-02 19:10:18] 2026-02-03 03:09:23,740 | INFO     | time since job start (191s) is within the limit (349056.0s)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,771 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-02 19:10:18] - Log from pilotlog.txt -
[2026-02-02 19:10:18] 2026-02-03 03:09:23,674 | INFO     | extracted standard info from prmon json
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 19:10:18] 2026-02-03 03:09:23,676 | WARNING  | wrong length of table data, x=[1770088021.0], y=[1357.0] (must be same and length>=4)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,696 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,696 | INFO     | ..............................
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . Timing measurements:
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . get job = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . initial setup = 20 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . payload setup = 24 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . stage-in = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . payload execution = 32 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . stage-out = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . log creation = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | ..............................
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993667635/pilotlog.txt
[2026-02-02 19:10:18] 2026-02-03 03:09:23,740 | INFO     | time since job start (191s) is within the limit (349056.0s)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,771 | WARNING  | 
[2026-02-02 19:10:18] [begin log extracts]
[2026-02-02 19:10:18] - Log from pilotlog.txt -
[2026-02-02 19:10:18] 2026-02-03 03:09:23,674 | INFO     | extracted standard info from prmon json
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 19:10:18] 2026-02-03 03:09:23,675 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 19:10:18] 2026-02-03 03:09:23,676 | WARNING  | wrong length of table data, x=[1770088021.0], y=[1357.0] (must be same and length>=4)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,696 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,696 | INFO     | ..............................
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . Timing measurements:
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . get job = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . initial setup = 20 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . payload setup = 24 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . stage-in = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . payload execution = 32 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . stage-out = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | . log creation = 0 s
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | ..............................
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-02 19:10:18] 2026-02-03 03:09:23,697 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993667635/pilotlog.txt
[2026-02-02 19:10:18] 2026-02-03 03:09:23,740 | INFO     | time since job start (191s) is within the limit (349056.0s)
[2026-02-02 19:10:18] [end log extracts]
[2026-02-02 19:10:18] 2026-02-03 03:09:23,772 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-02 19:10:18] 2026-02-03 03:09:23,772 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-02 19:10:18] 2026-02-03 03:09:24,407 | INFO     | 
[2026-02-02 19:10:18] 2026-02-03 03:09:24,407 | INFO     | job summary report
[2026-02-02 19:10:18] 2026-02-03 03:09:24,407 | INFO     | --------------------------------------------------
[2026-02-02 19:10:18] 2026-02-03 03:09:24,407 | INFO     | PanDA job id: 6993667635
[2026-02-02 19:10:18] 2026-02-03 03:09:24,407 | INFO     | task id: 48318042
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-02 19:07:16,001 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | pilot state: failed 
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | transexitcode: 65
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | exeerrorcode: 65
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | exitcode: 65
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | cpuconsumptiontime: 14 s
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | nevents: 0
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | neventsw: 0
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | pid: 348219
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | pgrp: 348219
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | corecount: 8
[2026-02-02 19:10:18] 2026-02-03 03:09:24,408 | INFO     | event service: False
[2026-02-02 19:10:18] 2026-02-03 03:09:24,409 | INFO     | sizes: {0: 2277850, 1: 2278311, 12: 2278311, 61: 2301419, 63: 2305739, 180: 2305937}
[2026-02-02 19:10:18] 2026-02-03 03:09:24,409 | INFO     | --------------------------------------------------
[2026-02-02 19:10:18] 2026-02-03 03:09:24,409 | INFO     | 
[2026-02-02 19:10:18] 2026-02-03 03:09:24,409 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-02 19:10:18] 2026-02-03 03:09:24,523 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | job 6993667635 has completed (purged errors)
[2026-02-02 19:10:18] 2026-02-03 03:09:24,525 | INFO     | overall cleanup function is called
[2026-02-02 19:10:18] 2026-02-03 03:09:25,536 | INFO     | --- collectZombieJob: --- 10, [348219]
[2026-02-02 19:10:18] 2026-02-03 03:09:25,536 | INFO     | zombie collector waiting for pid 348219
[2026-02-02 19:10:18] 2026-02-03 03:09:25,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 19:10:18] 2026-02-03 03:09:25,536 | INFO     | collected zombie processes
[2026-02-02 19:10:18] 2026-02-03 03:09:25,536 | INFO     | will attempt to kill all subprocesses of pid=348219
[2026-02-02 19:10:18] 2026-02-03 03:09:25,998 | INFO     | process IDs to be killed: [348219] (in reverse order)
[2026-02-02 19:10:18] 2026-02-03 03:09:26,066 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 19:10:18] 2026-02-03 03:09:26,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 19:10:18] 2026-02-03 03:09:26,074 | INFO     | did not find any defunct processes belonging to 348219
[2026-02-02 19:10:18] 2026-02-03 03:09:26,082 | INFO     | did not find any defunct processes belonging to 348219
[2026-02-02 19:10:18] 2026-02-03 03:09:26,083 | INFO     | ready for new job
[2026-02-02 19:10:18] 2026-02-03 03:09:26,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 19:10:18] 2026-02-03 03:09:26,084 | INFO     | **************************************
[2026-02-02 19:10:18] 2026-02-03 03:09:26,084 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 19:10:18] 2026-02-03 03:09:26,084 | INFO     | **************************************
[2026-02-02 19:10:18] 2026-02-03 03:09:26,084 | INFO     | 
[2026-02-02 19:10:18] 2026-02-03 03:09:26,085 | INFO     | architecture information:
[2026-02-02 19:10:18] 2026-02-03 03:09:26,086 | INFO     | executing command: cat /etc/os-release
[2026-02-02 19:10:18] 2026-02-03 03:09:26,097 | INFO     | cat /etc/os-release:
[2026-02-02 19:10:18] NAME="CentOS Linux"
[2026-02-02 19:10:18] VERSION="7 (Core)"
[2026-02-02 19:10:18] ID="centos"
[2026-02-02 19:10:18] ID_LIKE="rhel fedora"
[2026-02-02 19:10:18] VERSION_ID="7"
[2026-02-02 19:10:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 19:10:18] ANSI_COLOR="0;31"
[2026-02-02 19:10:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 19:10:18] HOME_URL="https://www.centos.org/"
[2026-02-02 19:10:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 19:10:18] 
[2026-02-02 19:10:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 19:10:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 19:10:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 19:10:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 19:10:18] 
[2026-02-02 19:10:18] 2026-02-03 03:09:26,097 | INFO     | **************************************
[2026-02-02 19:10:18] 2026-02-03 03:09:26,601 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-02 19:10:18] 2026-02-03 03:09:26,646 | INFO     | sufficient remaining disk space (1248019349504 B)
[2026-02-02 19:10:18] 2026-02-03 03:09:26,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 19:10:18] 2026-02-03 03:09:26,647 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 19:10:18] 2026-02-03 03:09:26,647 | INFO     | update_server=False
[2026-02-02 19:10:18] 2026-02-03 03:09:26,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 19:10:18] 2026-02-03 03:09:26,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 19:10:18] 2026-02-03 03:09:26,880 | INFO     | all payload control threads have been joined
[2026-02-02 19:10:18] 2026-02-03 03:09:27,077 | INFO     | all data control threads have been joined
[2026-02-02 19:10:18] 2026-02-03 03:09:27,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 19:10:18] 2026-02-03 03:09:27,574 | INFO     | aborting loop
[2026-02-02 19:10:18] 2026-02-03 03:09:27,653 | INFO     | [job] retrieve thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:27,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 19:10:18] 2026-02-03 03:09:27,813 | INFO     | [data] copytool_in thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:27,886 | INFO     | [payload] control thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:27,947 | INFO     | [payload] validate_post thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:28,046 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:28,083 | INFO     | [data] control thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:28,106 | INFO     | all job control threads have been joined
[2026-02-02 19:10:18] 2026-02-03 03:09:28,107 | INFO     | [job] validate thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:28,477 | INFO     | [payload] failed_post thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:28,534 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:28,580 | INFO     | [job] job monitor thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:28,994 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:29,080 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:29,113 | INFO     | [job] control thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:29,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 19:10:18] 2026-02-03 03:09:29,708 | INFO     | [data] copytool_out thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:30,251 | INFO     | [job] queue monitor thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:30,656 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 19:10:18] 2026-02-03 03:09:57,303 | INFO     | PID=338475 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 19:10:18] 2026-02-03 03:09:57,303 | INFO     | .. there are 33 such processes running
[2026-02-02 19:10:18] 2026-02-03 03:09:57,304 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 19:10:18] 2026-02-03 03:09:57,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 19:10:18] 2026-02-03 03:09:57,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 19:10:18] 2026-02-03 03:10:12,240 | INFO     | [monitor] cgroup control has ended
[2026-02-02 19:10:18] 2026-02-03 03:10:12,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715691267904)>', '<ExcThread(monitor, started 139715009308416)>']
[2026-02-02 19:10:18] 2026-02-03 03:10:13,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 19:10:18] 2026-02-03 03:10:13,400 | INFO     | [monitor] control thread has ended
[2026-02-02 19:10:18] 2026-02-03 03:10:17,535 | INFO     | all workflow threads have been joined
[2026-02-02 19:10:18] 2026-02-03 03:10:17,535 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 19:10:18] 2026-02-03 03:10:17,536 | INFO     | traces error code: 0
[2026-02-02 19:10:18] 2026-02-03 03:10:17,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 19:10:18] 2026-02-03 03:10:18,105 [wrapper] ==== pilot stdout END ====
[2026-02-02 19:10:18] 2026-02-03 03:10:18,107 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 19:10:18] 2026-02-03 03:10:18,109 [wrapper] pilotpid: 338475
[2026-02-02 19:10:18] 2026-02-03 03:10:18,111 [wrapper] Pilot exit status: 0
[2026-02-02 19:10:18] 2026-02-03 03:10:18,121 [wrapper] pandaids: 6993667635
[2026-02-02 19:10:18] 2026-02-03 03:10:18,162 [wrapper] cleanup supervisor_pilot  338484 338476
[2026-02-02 19:10:18] 2026-02-03 03:10:18,164 [wrapper] Test setup, not cleaning
[2026-02-02 19:10:18] 2026-02-03 03:10:18,166 [wrapper] apfmon messages muted
[2026-02-02 19:10:18] 2026-02-03 03:10:18,168 [wrapper] ==== wrapper stdout END ====
[2026-02-02 19:10:18] 2026-02-03 03:10:18,169 [wrapper] ==== wrapper stderr END ====
[2026-02-02 19:10:18]  *** Error codes and diagnostics ***
[2026-02-02 19:10:18]     "exeErrorCode": 65,
[2026-02-02 19:10:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-02 19:10:18]     "pilotErrorCode": 1305,
[2026-02-02 19:10:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-02 19:10:18]  *** Listing of results directory ***
[2026-02-02 19:10:18] total 487736
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc    584422 Feb  2 16:37 pilot3.tar.gz
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc      5111 Feb  2 16:37 queuedata.json
[2026-02-02 19:10:18] -rwx------. 1 boinc boinc     36322 Feb  2 16:37 runpilot2-wrapper.sh
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc       100 Feb  2 19:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 19:10:18] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 19:05 run_atlas
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc       105 Feb  2 19:05 job.xml
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc      6444 Feb  2 19:05 init_data.xml
[2026-02-02 19:10:18] -rw-r--r--. 2 boinc boinc 495314240 Feb  2 19:05 EVNT.48318040._000110.pool.root.1
[2026-02-02 19:10:18] -rw-r--r--. 2 boinc boinc     15845 Feb  2 19:05 start_atlas.sh
[2026-02-02 19:10:18] drwxrwx--x. 2 boinc boinc      4096 Feb  2 19:05 shared
[2026-02-02 19:10:18] -rw-r--r--. 2 boinc boinc    597768 Feb  2 19:05 input.tar.gz
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc         0 Feb  2 19:05 boinc_lockfile
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc      2536 Feb  2 19:05 pandaJob.out
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc   1009292 Feb  2 19:05 agis_schedconf.cvmfs.json
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc   1511668 Feb  2 19:05 agis_ddmendpoints.agis.ALL.json
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc       437 Feb  2 19:06 workernode_map.json
[2026-02-02 19:10:18] drwx------. 5 boinc boinc      4096 Feb  2 19:06 pilot3
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc       959 Feb  2 19:07 memory_monitor_summary.json
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc     21304 Feb  2 19:07 log.48318042._005760.job.log.tgz.1
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc      7012 Feb  2 19:09 heartbeat.json
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc        95 Feb  2 19:09 pilot_heartbeat.json
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc       523 Feb  2 19:10 boinc_task_state.xml
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc        22 Feb  2 19:10 wrapper_checkpoint.txt
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc      4818 Feb  2 19:10 pilotlog.txt
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc      8192 Feb  2 19:10 boinc_mmap_file
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc     84134 Feb  2 19:10 log.48318042._005760.job.log.1
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc       188 Feb  2 19:10 output.list
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc       620 Feb  2 19:10 runtime_log
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc    122880 Feb  2 19:10 result.tar.gz
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc      8633 Feb  2 19:10 runtime_log.err
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc       644 Feb  2 19:10 dMWKDmTbJ78n9Rq4apOajLDm4fhM0noT9bVooX4SDmZNTKDm2vL7Po.diag
[2026-02-02 19:10:18] -rw-r--r--. 1 boinc boinc      2136 Feb  2 19:10 stderr.txt
[2026-02-02 19:10:18] No HITS result produced
[2026-02-02 19:10:18]  *** Contents of shared directory: ***
[2026-02-02 19:10:18] total 484432
[2026-02-02 19:10:18] -rw-r--r--. 2 boinc boinc 495314240 Feb  2 19:05 ATLAS.root_0
[2026-02-02 19:10:18] -rw-r--r--. 2 boinc boinc     15845 Feb  2 19:05 start_atlas.sh
[2026-02-02 19:10:18] -rw-r--r--. 2 boinc boinc    597768 Feb  2 19:05 input.tar.gz
[2026-02-02 19:10:18] -rw-------. 1 boinc boinc    122880 Feb  2 19:10 result.tar.gz
19:10:19 (332487): run_atlas exited; CPU time 21.402727
19:10:19 (332487): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN