Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:55:23 (2877848): wrapper (7.7.26015): starting
21:55:23 (2877848): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 21:55:23] Arguments: --nthreads 12
[2026-02-03 21:55:23] Threads: 12
[2026-02-03 21:55:23] Checking for CVMFS
[2026-02-03 21:55:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 21:55:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 21:55:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 21:55:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 21:55:24] 2.13.3.0 1749563 8800 53476 155844 1 188 3403400 4096001 2736 130560 0 10266052 99.994 311761 1050 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-02-03 21:55:24] CVMFS is ok
[2026-02-03 21:55:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 21:55:24] Checking for apptainer binary...
[2026-02-03 21:55:24] apptainer is not installed, using version from CVMFS
[2026-02-03 21:55:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 21:55:24] dualxeon2
[2026-02-03 21:55:24] apptainer works
[2026-02-03 21:55:24] Set ATHENA_PROC_NUMBER=12
[2026-02-03 21:55:24] Set ATHENA_CORE_NUMBER=12
[2026-02-03 21:55:24] Starting ATLAS job with PandaID=6983327249
[2026-02-03 21:55:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 00:03:18]  *** The last 200 lines of the pilot log: ***
[2026-02-04 00:03:18] 2026-02-04 00:02:45,123 | INFO     | log transfer has been attempted: DONE
[2026-02-04 00:03:18] 2026-02-04 00:02:45,123 | INFO     | job 6983327249 has finished - writing final server update
[2026-02-04 00:03:18] 2026-02-04 00:02:45,123 | INFO     | total number of processed events: 400 (read)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,134 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/11/PanDA_Pilot-6983327249/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,137 | INFO     | extracted standard info from prmon json
[2026-02-04 00:03:18] 2026-02-04 00:02:45,138 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 00:03:18] 2026-02-04 00:02:45,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 00:03:18] 2026-02-04 00:02:45,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 00:03:18] 2026-02-04 00:02:45,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 00:03:18] 2026-02-04 00:02:45,145 | INFO     | fitting pss+swap vs Time
[2026-02-04 00:03:18] 2026-02-04 00:02:45,145 | INFO     | sum of square deviations: 605592750.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,146 | INFO     | sum of deviations: 18504915043.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,146 | INFO     | mean x: 1770159563.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,146 | INFO     | mean y: 2605273.16
[2026-02-04 00:03:18] 2026-02-04 00:02:45,147 | INFO     | intersect: -54087626695.21975
[2026-02-04 00:03:18] 2026-02-04 00:02:45,147 | INFO     | chi2: 2.6754222625799384
[2026-02-04 00:03:18] 2026-02-04 00:02:45,147 | INFO     | sum of square deviations: 535786790.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,152 | INFO     | sum of deviations: 26476130181.000004
[2026-02-04 00:03:18] 2026-02-04 00:02:45,152 | INFO     | mean x: 1770159410.5
[2026-02-04 00:03:18] 2026-02-04 00:02:45,152 | INFO     | mean y: 2622054.466666667
[2026-02-04 00:03:18] 2026-02-04 00:02:45,152 | INFO     | intersect: -87470551730.8001
[2026-02-04 00:03:18] 2026-02-04 00:02:45,153 | INFO     | chi2: 1.8874066092975885
[2026-02-04 00:03:18] 2026-02-04 00:02:45,153 | INFO     | current chi2=1.8874066092975885 (change=29.453879647486296 %)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,153 | INFO     | sum of square deviations: 471562330.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,154 | INFO     | sum of deviations: 25339470638.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,154 | INFO     | mean x: 1770159258.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,154 | INFO     | mean y: 2619353.565217391
[2026-02-04 00:03:18] 2026-02-04 00:02:45,154 | INFO     | intersect: -95117146770.82997
[2026-02-04 00:03:18] 2026-02-04 00:02:45,158 | INFO     | chi2: 1.8891207535713204
[2026-02-04 00:03:18] 2026-02-04 00:02:45,159 | INFO     | current chi2=1.8891207535713204 (change=-0.09082008430445065 %)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,159 | INFO     | right removable region: 114
[2026-02-04 00:03:18] 2026-02-04 00:02:45,159 | INFO     | sum of square deviations: 535786790.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,160 | INFO     | sum of deviations: -6732543068.5
[2026-02-04 00:03:18] 2026-02-04 00:02:45,160 | INFO     | mean x: 1770159715.5
[2026-02-04 00:03:18] 2026-02-04 00:02:45,160 | INFO     | mean y: 2659748.8583333334
[2026-02-04 00:03:18] 2026-02-04 00:02:45,160 | INFO     | intersect: 22245978817.48908
[2026-02-04 00:03:18] 2026-02-04 00:02:45,161 | INFO     | chi2: 0.9116805757039881
[2026-02-04 00:03:18] 2026-02-04 00:02:45,161 | INFO     | current chi2=0.9116805757039881 (change=65.92386224577332 %)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,161 | INFO     | sum of square deviations: 471562330.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,162 | INFO     | sum of deviations: -9926881909.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,162 | INFO     | mean x: 1770159868.0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,162 | INFO     | mean y: 2667120.5304347826
[2026-02-04 00:03:18] 2026-02-04 00:02:45,162 | INFO     | intersect: 37266389966.43085
[2026-02-04 00:03:18] 2026-02-04 00:02:45,162 | INFO     | chi2: 0.848935727212035
[2026-02-04 00:03:18] 2026-02-04 00:02:45,163 | INFO     | current chi2=0.848935727212035 (change=6.882328105268918 %)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,163 | INFO     | left removable region: 20
[2026-02-04 00:03:18] 2026-02-04 00:02:45,163 | INFO     | sum of square deviations: 257521107.5
[2026-02-04 00:03:18] 2026-02-04 00:02:45,166 | INFO     | sum of deviations: 1418528190.5
[2026-02-04 00:03:18] 2026-02-04 00:02:45,167 | INFO     | mean x: 1770159837.5
[2026-02-04 00:03:18] 2026-02-04 00:02:45,167 | INFO     | mean y: 2679370.6276595746
[2026-02-04 00:03:18] 2026-02-04 00:02:45,167 | INFO     | intersect: -9748061667.88954
[2026-02-04 00:03:18] 2026-02-04 00:02:45,167 | INFO     | chi2: 0.0008915497440037403
[2026-02-04 00:03:18] 2026-02-04 00:02:45,167 | INFO     | current memory leak: 5.51 B/s (using 94 data points, chi2=0.00)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,168 | INFO     | could have reported an average CPU frequency of 2594 MHz (8 samples)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,168 | INFO     | ..............................
[2026-02-04 00:03:18] 2026-02-04 00:02:45,168 | INFO     | . Timing measurements:
[2026-02-04 00:03:18] 2026-02-04 00:02:45,168 | INFO     | . get job = 0 s
[2026-02-04 00:03:18] 2026-02-04 00:02:45,168 | INFO     | . initial setup = 12 s
[2026-02-04 00:03:18] 2026-02-04 00:02:45,168 | INFO     | . payload setup = 12 s
[2026-02-04 00:03:18] 2026-02-04 00:02:45,169 | INFO     | . stage-in = 0 s
[2026-02-04 00:03:18] 2026-02-04 00:02:45,169 | INFO     | . payload execution = 7583 s
[2026-02-04 00:03:18] 2026-02-04 00:02:45,169 | INFO     | . stage-out = 1 s
[2026-02-04 00:03:18] 2026-02-04 00:02:45,169 | INFO     | . log creation = 0 s
[2026-02-04 00:03:18] 2026-02-04 00:02:45,169 | INFO     | ..............................
[2026-02-04 00:03:18] 2026-02-04 00:02:45,273 | INFO     | 
[2026-02-04 00:03:18] 2026-02-04 00:02:45,273 | INFO     | job summary report
[2026-02-04 00:03:18] 2026-02-04 00:02:45,273 | INFO     | --------------------------------------------------
[2026-02-04 00:03:18] 2026-02-04 00:02:45,273 | INFO     | PanDA job id: 6983327249
[2026-02-04 00:03:18] 2026-02-04 00:02:45,273 | INFO     | task id: 48318034
[2026-02-04 00:03:18] 2026-02-04 00:02:45,273 | INFO     | errors: (none)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,273 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 00:03:18] 2026-02-04 00:02:45,273 | INFO     | pilot state: finished 
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | transexitcode: 0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | exeerrorcode: 0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | exeerrordiag: 
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | exitcode: 0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | exitmsg: OK
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | cpuconsumptiontime: 57027 s
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | nevents: 400
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | neventsw: 0
[2026-02-04 00:03:18] 2026-02-04 00:02:45,274 | INFO     | pid: 2889067
[2026-02-04 00:03:18] 2026-02-04 00:02:45,275 | INFO     | pgrp: 2889067
[2026-02-04 00:03:18] 2026-02-04 00:02:45,275 | INFO     | corecount: 12
[2026-02-04 00:03:18] 2026-02-04 00:02:45,275 | INFO     | event service: False
[2026-02-04 00:03:18] 2026-02-04 00:02:45,275 | INFO     | sizes: {0: 2277761, 1: 2278278, 2: 2278306, 7599: 2305624, 7601: 2314670, 7602: 2314726, 7605: 2315048}
[2026-02-04 00:03:18] 2026-02-04 00:02:45,275 | INFO     | --------------------------------------------------
[2026-02-04 00:03:18] 2026-02-04 00:02:45,275 | INFO     | 
[2026-02-04 00:03:18] 2026-02-04 00:02:45,275 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/11
[2026-02-04 00:03:18] 2026-02-04 00:02:45,313 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,313 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,313 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,313 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,315 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,315 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 00:03:18] 2026-02-04 00:02:45,315 | INFO     | job 6983327249 has completed (purged errors)
[2026-02-04 00:03:18] 2026-02-04 00:02:45,316 | INFO     | overall cleanup function is called
[2026-02-04 00:03:18] 2026-02-04 00:02:46,329 | INFO     | --- collectZombieJob: --- 10, [2889067]
[2026-02-04 00:03:18] 2026-02-04 00:02:46,330 | INFO     | zombie collector waiting for pid 2889067
[2026-02-04 00:03:18] 2026-02-04 00:02:46,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 00:03:18] 2026-02-04 00:02:46,330 | INFO     | collected zombie processes
[2026-02-04 00:03:18] 2026-02-04 00:02:46,330 | INFO     | will attempt to kill all subprocesses of pid=2889067
[2026-02-04 00:03:18] 2026-02-04 00:02:46,631 | INFO     | process IDs to be killed: [2889067] (in reverse order)
[2026-02-04 00:03:18] 2026-02-04 00:02:46,740 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 00:03:18] 2026-02-04 00:02:46,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 00:03:18] 2026-02-04 00:02:46,750 | INFO     | did not find any defunct processes belonging to 2889067
[2026-02-04 00:03:18] 2026-02-04 00:02:46,757 | INFO     | did not find any defunct processes belonging to 2889067
[2026-02-04 00:03:18] 2026-02-04 00:02:46,757 | INFO     | ready for new job
[2026-02-04 00:03:18] 2026-02-04 00:02:46,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 00:03:18] 2026-02-04 00:02:46,765 | INFO     | **************************************
[2026-02-04 00:03:18] 2026-02-04 00:02:46,765 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 00:03:18] 2026-02-04 00:02:46,765 | INFO     | **************************************
[2026-02-04 00:03:18] 2026-02-04 00:02:46,765 | INFO     | 
[2026-02-04 00:03:18] 2026-02-04 00:02:46,771 | INFO     | architecture information:
[2026-02-04 00:03:18] 2026-02-04 00:02:46,772 | INFO     | executing command: cat /etc/os-release
[2026-02-04 00:03:18] 2026-02-04 00:02:46,798 | INFO     | cat /etc/os-release:
[2026-02-04 00:03:18] NAME="CentOS Linux"
[2026-02-04 00:03:18] VERSION="7 (Core)"
[2026-02-04 00:03:18] ID="centos"
[2026-02-04 00:03:18] ID_LIKE="rhel fedora"
[2026-02-04 00:03:18] VERSION_ID="7"
[2026-02-04 00:03:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 00:03:18] ANSI_COLOR="0;31"
[2026-02-04 00:03:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 00:03:18] HOME_URL="https://www.centos.org/"
[2026-02-04 00:03:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 00:03:18] 
[2026-02-04 00:03:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 00:03:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 00:03:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 00:03:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 00:03:18] 
[2026-02-04 00:03:18] 2026-02-04 00:02:46,799 | INFO     | **************************************
[2026-02-04 00:03:18] 2026-02-04 00:02:47,307 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/11
[2026-02-04 00:03:18] 2026-02-04 00:02:47,334 | INFO     | sufficient remaining disk space (73046949888 B)
[2026-02-04 00:03:18] 2026-02-04 00:02:47,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 00:03:18] 2026-02-04 00:02:47,335 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 00:03:18] 2026-02-04 00:02:47,335 | INFO     | update_server=False
[2026-02-04 00:03:18] 2026-02-04 00:02:47,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 00:03:18] 2026-02-04 00:02:47,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 00:03:18] 2026-02-04 00:02:47,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:03:18] 2026-02-04 00:02:47,672 | INFO     | aborting loop
[2026-02-04 00:03:18] 2026-02-04 00:02:48,152 | INFO     | all payload control threads have been joined
[2026-02-04 00:03:18] 2026-02-04 00:02:48,344 | INFO     | [job] retrieve thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:48,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 00:03:18] 2026-02-04 00:02:48,423 | INFO     | all data control threads have been joined
[2026-02-04 00:03:18] 2026-02-04 00:02:48,439 | INFO     | [payload] failed_post thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:48,624 | INFO     | all job control threads have been joined
[2026-02-04 00:03:18] 2026-02-04 00:02:48,677 | INFO     | [job] job monitor thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:48,787 | INFO     | [data] copytool_in thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:48,959 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,070 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,157 | INFO     | [payload] control thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,167 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,168 | INFO     | [job] validate thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,343 | INFO     | [data] copytool_out thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,428 | INFO     | [data] control thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,629 | INFO     | [job] control thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,694 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:49,894 | INFO     | [payload] validate_post thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:50,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:03:18] 2026-02-04 00:02:51,300 | INFO     | [job] queue monitor thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:02:52,412 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 00:03:18] 2026-02-04 00:03:10,097 | INFO     | [monitor] cgroup control has ended
[2026-02-04 00:03:18] 2026-02-04 00:03:11,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139436055299904)>', '<ExcThread(monitor, started 139435425388288)>']
[2026-02-04 00:03:18] 2026-02-04 00:03:16,550 | INFO     | all workflow threads have been joined
[2026-02-04 00:03:18] 2026-02-04 00:03:16,551 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 00:03:18] 2026-02-04 00:03:16,551 | INFO     | traces error code: 0
[2026-02-04 00:03:18] 2026-02-04 00:03:16,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 00:03:18] 2026-02-04 00:03:18,345 | INFO     | PID=2883099 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 00:03:18] 2026-02-04 00:03:18,345 | INFO     | .. there are 4 such processes running
[2026-02-04 00:03:18] 2026-02-04 00:03:18,345 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 00:03:18] 2026-02-04 00:03:18,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 00:03:18] 2026-02-04 00:03:18,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 00:03:18] 2026-02-04 00:03:18,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 00:03:18] 2026-02-04 00:03:18,346 | CRITICAL | thread 'MainThread' is not alive
[2026-02-04 00:03:18] 2026-02-04 00:03:18,346 | INFO     | [monitor] control thread has ended
[2026-02-04 00:03:18] 2026-02-04 00:03:18,570 [wrapper] ==== pilot stdout END ====
[2026-02-04 00:03:18] 2026-02-04 00:03:18,577 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 00:03:18] 2026-02-04 00:03:18,583 [wrapper] pilotpid: 2883099
[2026-02-04 00:03:18] 2026-02-04 00:03:18,590 [wrapper] Pilot exit status: 0
[2026-02-04 00:03:18] 2026-02-04 00:03:18,609 [wrapper] pandaids: 6983327249
[2026-02-04 00:03:18] 2026-02-04 00:03:18,666 [wrapper] cleanup supervisor_pilot 3217094 2883100
[2026-02-04 00:03:18] 2026-02-04 00:03:18,674 [wrapper] Test setup, not cleaning
[2026-02-04 00:03:18] 2026-02-04 00:03:18,680 [wrapper] apfmon messages muted
[2026-02-04 00:03:18] 2026-02-04 00:03:18,685 [wrapper] ==== wrapper stdout END ====
[2026-02-04 00:03:18] 2026-02-04 00:03:18,693 [wrapper] ==== wrapper stderr END ====
[2026-02-04 00:03:18]  *** Error codes and diagnostics ***
[2026-02-04 00:03:18]     "exeErrorCode": 0,
[2026-02-04 00:03:18]     "exeErrorDiag": "",
[2026-02-04 00:03:18]     "pilotErrorCode": 0,
[2026-02-04 00:03:18]     "pilotErrorDiag": "",
[2026-02-04 00:03:18]  *** Listing of results directory ***
[2026-02-04 00:03:18] total 672244
[2026-02-04 00:03:18] -rw-r--r-- 1 boinc boinc    584422 Jan 25 18:47 pilot3.tar.gz
[2026-02-04 00:03:18] -rwx------ 1 boinc boinc     36322 Jan 25 18:50 runpilot2-wrapper.sh
[2026-02-04 00:03:18] -rw-r--r-- 1 boinc boinc      5111 Jan 25 18:53 queuedata.json
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc       100 Feb  3 21:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 00:03:18] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 21:55 run_atlas
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc       105 Feb  3 21:55 job.xml
[2026-02-04 00:03:18] -rw-r--r-- 2 boinc boinc 497911644 Feb  3 21:55 EVNT.48318032._000018.pool.root.1
[2026-02-04 00:03:18] -rw-r--r-- 2 boinc boinc     15845 Feb  3 21:55 start_atlas.sh
[2026-02-04 00:03:18] drwxrwx--x 2 boinc boinc      4096 Feb  3 21:55 shared
[2026-02-04 00:03:18] -rw-r--r-- 2 boinc boinc    597767 Feb  3 21:55 input.tar.gz
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc      6157 Feb  3 21:55 init_data.xml
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc         0 Feb  3 21:55 boinc_setup_complete
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc         0 Feb  3 21:55 boinc_lockfile
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc      2530 Feb  3 21:55 pandaJob.out
[2026-02-04 00:03:18] -rw------- 1 boinc boinc   1009252 Feb  3 21:55 agis_schedconf.cvmfs.json
[2026-02-04 00:03:18] -rw------- 1 boinc boinc   1511668 Feb  3 21:55 agis_ddmendpoints.agis.ALL.json
[2026-02-04 00:03:18] -rw------- 1 boinc boinc       426 Feb  3 21:55 workernode_map.json
[2026-02-04 00:03:18] drwx------ 5 boinc boinc      4096 Feb  3 21:55 pilot3
[2026-02-04 00:03:18] -rw------- 1 boinc boinc 183409960 Feb  4 00:01 HITS.48318034._000874.pool.root.1
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc       530 Feb  4 00:02 boinc_task_state.xml
[2026-02-04 00:03:18] -rw------- 1 boinc boinc        95 Feb  4 00:02 pilot_heartbeat.json
[2026-02-04 00:03:18] -rw------- 1 boinc boinc      1030 Feb  4 00:02 memory_monitor_summary.json
[2026-02-04 00:03:18] -rw------- 1 boinc boinc    443209 Feb  4 00:02 log.48318034._000874.job.log.tgz.1
[2026-02-04 00:03:18] -rw------- 1 boinc boinc      6323 Feb  4 00:02 heartbeat.json
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc        27 Feb  4 00:03 wrapper_checkpoint.txt
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc      8192 Feb  4 00:03 boinc_mmap_file
[2026-02-04 00:03:18] -rw------- 1 boinc boinc       892 Feb  4 00:03 pilotlog.txt
[2026-02-04 00:03:18] -rw------- 1 boinc boinc   1116315 Feb  4 00:03 log.48318034._000874.job.log.1
[2026-02-04 00:03:18] -rw------- 1 boinc boinc       357 Feb  4 00:03 output.list
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc       620 Feb  4 00:03 runtime_log
[2026-02-04 00:03:18] -rw------- 1 boinc boinc   1576960 Feb  4 00:03 result.tar.gz
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc      9187 Feb  4 00:03 runtime_log.err
[2026-02-04 00:03:18] -rw------- 1 boinc boinc       653 Feb  4 00:03 3VDLDmUNK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPb1KDmuX7bCo.diag
[2026-02-04 00:03:18] -rw-rw-r-- 1 boinc boinc     20791 Feb  4 00:03 stderr.txt
[2026-02-04 00:03:18] HITS file was successfully produced:
[2026-02-04 00:03:18] -rw------- 1 boinc boinc 183409960 Feb  4 00:01 shared/HITS.pool.root.1
[2026-02-04 00:03:18]  *** Contents of shared directory: ***
[2026-02-04 00:03:18] total 667504
[2026-02-04 00:03:18] -rw-r--r-- 2 boinc boinc 497911644 Feb  3 21:55 ATLAS.root_0
[2026-02-04 00:03:18] -rw-r--r-- 2 boinc boinc     15845 Feb  3 21:55 start_atlas.sh
[2026-02-04 00:03:18] -rw-r--r-- 2 boinc boinc    597767 Feb  3 21:55 input.tar.gz
[2026-02-04 00:03:18] -rw------- 1 boinc boinc 183409960 Feb  4 00:01 HITS.pool.root.1
[2026-02-04 00:03:18] -rw------- 1 boinc boinc   1576960 Feb  4 00:03 result.tar.gz
00:03:20 (2877848): run_atlas exited; CPU time 57112.245639
00:03:20 (2877848): called boinc_finish(0)

</stderr_txt>
]]>

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