Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:44:46 (445972): wrapper (7.7.26015): starting
18:44:46 (445972): wrapper: running run_atlas (--nthreads 10)
[2026-02-02 18:44:46] Arguments: --nthreads 10
[2026-02-02 18:44:46] Threads: 10
[2026-02-02 18:44:46] Checking for CVMFS
[2026-02-02 18:44:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 18:44:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 18:44:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 18:44:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 18:44:46] 2.13.3.0 12357 128599 332644 155810 1 766 19568963 32503808 35343 16776704 0 1769778043 99.608 1774394013 47952 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-02 18:44:46] CVMFS is ok
[2026-02-02 18:44:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 18:44:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 18:44:46] Further information can be found at the LHC@home message board.
[2026-02-02 18:44:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 18:44:46] Checking for apptainer binary...
[2026-02-02 18:44:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 18:44:46] Running /usr/bin/apptainer --version
[2026-02-02 18:44:46] apptainer version 1.4.5-2.el9
[2026-02-02 18:44:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 18:44:47] c8-7-2.aglt2.org
[2026-02-02 18:44:47] apptainer works
[2026-02-02 18:44:47] Set ATHENA_PROC_NUMBER=10
[2026-02-02 18:44:47] Set ATHENA_CORE_NUMBER=10
[2026-02-02 18:44:47] Starting ATLAS job with PandaID=6983326982
[2026-02-02 18:44:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 19:46:41]  *** The last 200 lines of the pilot log: ***
[2026-02-02 19:46:41]  guid=45204a52-f900-47fc-b58c-8baa3e8a55bb
[2026-02-02 19:46:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 19:46:41]  is_altstaged=None
[2026-02-02 19:46:41]  is_tar=False
[2026-02-02 19:46:41]  lfn=log.48318034._000787.job.log.tgz.1
[2026-02-02 19:46:41]  mtime=0
[2026-02-02 19:46:41]  protocol_id=None
[2026-02-02 19:46:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 19:46:41]  replicas=None
[2026-02-02 19:46:41]  scope=mc23_13p6TeV
[2026-02-02 19:46:41]  status=None
[2026-02-02 19:46:41]  status_code=0
[2026-02-02 19:46:41]  storage_token=
[2026-02-02 19:46:41]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6983326982/log.48318034._000787.job.log.tgz.1
[2026-02-02 19:46:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/4a/log.48318034._000787.job.log.tgz.1
[2026-02-02 19:46:41]  workdir=None
[2026-02-02 19:46:41] ]
[2026-02-02 19:46:41] 2026-02-03 00:45:29,939 | INFO     | transferring file log.48318034._000787.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6983326982/log.48318034._000787.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-02 19:46:41] 2026-02-03 00:45:29,939 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6983326982/log.48318034._000787.job.log.tgz.1 /tmp/boinchome/slots/2/log.48318034._000787.job
[2026-02-02 19:46:41] 2026-02-03 00:45:30,029 | INFO     | adding to output.list: log.48318034._000787.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/4a/log.48318034._000787.job.log.tg
[2026-02-02 19:46:41] 2026-02-03 00:45:30,030 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 19:46:41] 2026-02-03 00:45:30,030 | INFO     | summary of transferred files:
[2026-02-02 19:46:41] 2026-02-03 00:45:30,030 | INFO     |  -- lfn=log.48318034._000787.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 19:46:41] 2026-02-03 00:45:30,030 | INFO     | stage-out finished correctly
[2026-02-02 19:46:41] 2026-02-03 00:45:30,672 | WARNING  | process 486668 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 19:46:41] 2026-02-03 00:45:30,672 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983326982/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 19:46:41] 2026-02-03 00:45:31,261 | INFO     | time since job start (3603s) is within the limit (349056.0s)
[2026-02-02 19:46:41] 2026-02-03 00:45:31,477 | INFO     | number of running child processes to parent process 486668: 1
[2026-02-02 19:46:41] 2026-02-03 00:45:31,477 | INFO     | maximum number of monitored processes: 6
[2026-02-02 19:46:41] 2026-02-03 00:45:33,063 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 19:46:41] 2026-02-03 00:45:33,169 | INFO     | job 6983326982 has state=finished
[2026-02-02 19:46:41] 2026-02-03 00:45:33,169 | INFO     | preparing for final server update for job 6983326982 in state='finished'
[2026-02-02 19:46:41] 2026-02-03 00:45:33,169 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-6983326982/jobReport.json
[2026-02-02 19:46:41] 2026-02-03 00:45:33,171 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-02-02 19:46:41] 2026-02-03 00:45:33,171 | INFO     | this job has now completed (state=finished)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,171 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,171 | INFO     | log transfer has been attempted: DONE
[2026-02-02 19:46:41] 2026-02-03 00:45:33,171 | INFO     | job 6983326982 has finished - writing final server update
[2026-02-02 19:46:41] 2026-02-03 00:45:33,171 | INFO     | total number of processed events: 400 (read)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,196 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983326982/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,196 | INFO     | extracted standard info from prmon json
[2026-02-02 19:46:41] 2026-02-03 00:45:33,196 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 19:46:41] 2026-02-03 00:45:33,196 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 19:46:41] 2026-02-03 00:45:33,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 19:46:41] 2026-02-03 00:45:33,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 19:46:41] 2026-02-03 00:45:33,201 | INFO     | fitting pss+swap vs Time
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | sum of square deviations: 43587064.82692311
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | sum of deviations: -3670148431.846154
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | mean x: 1770077837.5576923
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | mean y: 2675985.6153846155
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | intersect: 149048004583.774
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | chi2: 0.02094259818781806
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | current memory leak: -84.20 B/s (using 52 data points, chi2=0.02)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | could have reported an average CPU frequency of 3799 MHz (5 samples)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | ..............................
[2026-02-02 19:46:41] 2026-02-03 00:45:33,202 | INFO     | . Timing measurements:
[2026-02-02 19:46:41] 2026-02-03 00:45:33,203 | INFO     | . get job = 0 s
[2026-02-02 19:46:41] 2026-02-03 00:45:33,203 | INFO     | . initial setup = 17 s
[2026-02-02 19:46:41] 2026-02-03 00:45:33,203 | INFO     | . payload setup = 18 s
[2026-02-02 19:46:41] 2026-02-03 00:45:33,203 | INFO     | . stage-in = 0 s
[2026-02-02 19:46:41] 2026-02-03 00:45:33,203 | INFO     | . payload execution = 3566 s
[2026-02-02 19:46:41] 2026-02-03 00:45:33,203 | INFO     | . stage-out = 1 s
[2026-02-02 19:46:41] 2026-02-03 00:45:33,203 | INFO     | . log creation = 0 s
[2026-02-02 19:46:41] 2026-02-03 00:45:33,203 | INFO     | ..............................
[2026-02-02 19:46:41] 2026-02-03 00:45:33,276 | INFO     | time since job start (3605s) is within the limit (349056.0s)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | 
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | job summary report
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | --------------------------------------------------
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | PanDA job id: 6983326982
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | task id: 48318034
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | errors: (none)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | pilot state: finished 
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | transexitcode: 0
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | exeerrorcode: 0
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | exeerrordiag: 
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | exitcode: 0
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | exitmsg: OK
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | cpuconsumptiontime: 23556 s
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | nevents: 400
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | neventsw: 0
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | pid: 486668
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | pgrp: 486668
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | corecount: 10
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | event service: False
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | sizes: {0: 2277966, 1: 2278256, 11: 2278256, 3589: 2303920, 3590: 2312918, 3593: 2313328}
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | --------------------------------------------------
[2026-02-02 19:46:41] 2026-02-03 00:45:33,638 | INFO     | 
[2026-02-02 19:46:41] 2026-02-03 00:45:33,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-02 19:46:41] 2026-02-03 00:45:33,754 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,757 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,757 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,757 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | job 6983326982 has completed (purged errors)
[2026-02-02 19:46:41] 2026-02-03 00:45:33,758 | INFO     | overall cleanup function is called
[2026-02-02 19:46:41] 2026-02-03 00:45:34,765 | INFO     | --- collectZombieJob: --- 10, [486668]
[2026-02-02 19:46:41] 2026-02-03 00:45:34,765 | INFO     | zombie collector waiting for pid 486668
[2026-02-02 19:46:41] 2026-02-03 00:45:34,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 19:46:41] 2026-02-03 00:45:34,766 | INFO     | collected zombie processes
[2026-02-02 19:46:41] 2026-02-03 00:45:34,766 | INFO     | will attempt to kill all subprocesses of pid=486668
[2026-02-02 19:46:41] 2026-02-03 00:45:35,715 | INFO     | process IDs to be killed: [486668] (in reverse order)
[2026-02-02 19:46:41] 2026-02-03 00:45:36,137 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 19:46:41] 2026-02-03 00:45:36,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 19:46:41] 2026-02-03 00:45:36,196 | INFO     | did not find any defunct processes belonging to 486668
[2026-02-02 19:46:41] 2026-02-03 00:45:36,233 | INFO     | did not find any defunct processes belonging to 486668
[2026-02-02 19:46:41] 2026-02-03 00:45:36,234 | INFO     | ready for new job
[2026-02-02 19:46:41] 2026-02-03 00:45:36,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 19:46:41] 2026-02-03 00:45:36,235 | INFO     | **************************************
[2026-02-02 19:46:41] 2026-02-03 00:45:36,235 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 19:46:41] 2026-02-03 00:45:36,235 | INFO     | **************************************
[2026-02-02 19:46:41] 2026-02-03 00:45:36,235 | INFO     | 
[2026-02-02 19:46:41] 2026-02-03 00:45:36,239 | INFO     | architecture information:
[2026-02-02 19:46:41] 2026-02-03 00:45:36,243 | INFO     | executing command: cat /etc/os-release
[2026-02-02 19:46:41] 2026-02-03 00:45:36,387 | INFO     | cat /etc/os-release:
[2026-02-02 19:46:41] NAME="CentOS Linux"
[2026-02-02 19:46:41] VERSION="7 (Core)"
[2026-02-02 19:46:41] ID="centos"
[2026-02-02 19:46:41] ID_LIKE="rhel fedora"
[2026-02-02 19:46:41] VERSION_ID="7"
[2026-02-02 19:46:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 19:46:41] ANSI_COLOR="0;31"
[2026-02-02 19:46:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 19:46:41] HOME_URL="https://www.centos.org/"
[2026-02-02 19:46:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 19:46:41] 
[2026-02-02 19:46:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 19:46:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 19:46:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 19:46:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 19:46:41] 
[2026-02-02 19:46:41] 2026-02-03 00:45:36,387 | INFO     | **************************************
[2026-02-02 19:46:41] 2026-02-03 00:45:36,891 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-02 19:46:41] 2026-02-03 00:45:36,918 | INFO     | sufficient remaining disk space (86084943872 B)
[2026-02-02 19:46:41] 2026-02-03 00:45:36,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 19:46:41] 2026-02-03 00:45:36,918 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 19:46:41] 2026-02-03 00:45:36,918 | INFO     | update_server=False
[2026-02-02 19:46:41] 2026-02-03 00:45:36,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 19:46:41] 2026-02-03 00:45:37,479 | INFO     | all data control threads have been joined
[2026-02-02 19:46:41] 2026-02-03 00:45:37,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 19:46:41] 2026-02-03 00:45:37,500 | INFO     | aborting loop
[2026-02-02 19:46:41] 2026-02-03 00:45:37,927 | INFO     | [job] retrieve thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:37,992 | INFO     | all payload control threads have been joined
[2026-02-02 19:46:41] 2026-02-03 00:45:38,189 | INFO     | [payload] failed_post thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:38,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 19:46:41] 2026-02-03 00:45:38,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 19:46:41] 2026-02-03 00:45:38,485 | INFO     | [data] control thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:38,505 | INFO     | [job] job monitor thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:38,570 | INFO     | [job] validate thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:38,596 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:38,596 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:38,627 | INFO     | all job control threads have been joined
[2026-02-02 19:46:41] 2026-02-03 00:45:39,001 | INFO     | [payload] control thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:39,015 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:39,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 19:46:41] 2026-02-03 00:45:39,283 | INFO     | [data] copytool_in thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:39,284 | INFO     | [payload] validate_post thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:39,326 | INFO     | [job] queue monitor thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:39,341 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:39,633 | INFO     | [job] control thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:40,295 | INFO     | [data] copytool_out thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:45:43,204 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 19:46:41] 2026-02-03 00:46:07,199 | INFO     | PID=457511 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 19:46:41] 2026-02-03 00:46:07,201 | INFO     | .. there are 56 such processes running
[2026-02-02 19:46:41] 2026-02-03 00:46:07,201 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 19:46:41] 2026-02-03 00:46:07,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 19:46:41] 2026-02-03 00:46:07,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 19:46:41] 2026-02-03 00:46:34,516 | INFO     | [monitor] cgroup control has ended
[2026-02-02 19:46:41] 2026-02-03 00:46:34,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956800935744)>', '<ExcThread(monitor, started 139956315997952)>']
[2026-02-02 19:46:41] 2026-02-03 00:46:35,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 19:46:41] 2026-02-03 00:46:35,406 | INFO     | [monitor] control thread has ended
[2026-02-02 19:46:41] 2026-02-03 00:46:39,660 | INFO     | all workflow threads have been joined
[2026-02-02 19:46:41] 2026-02-03 00:46:39,660 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 19:46:41] 2026-02-03 00:46:39,660 | INFO     | traces error code: 0
[2026-02-02 19:46:41] 2026-02-03 00:46:39,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 19:46:41] 2026-02-03 00:46:39,796 [wrapper] ==== pilot stdout END ====
[2026-02-02 19:46:41] 2026-02-03 00:46:39,865 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 19:46:41] 2026-02-03 00:46:39,893 [wrapper] pilotpid: 457511
[2026-02-02 19:46:41] 2026-02-03 00:46:39,947 [wrapper] Pilot exit status: 0
[2026-02-02 19:46:41] 2026-02-03 00:46:40,123 [wrapper] pandaids: 6983326982
[2026-02-02 19:46:41] 2026-02-03 00:46:40,290 [wrapper] cleanup supervisor_pilot 1426044 457512
[2026-02-02 19:46:41] 2026-02-03 00:46:40,354 [wrapper] Test setup, not cleaning
[2026-02-02 19:46:41] 2026-02-03 00:46:40,394 [wrapper] apfmon messages muted
[2026-02-02 19:46:41] 2026-02-03 00:46:40,424 [wrapper] ==== wrapper stdout END ====
[2026-02-02 19:46:41] 2026-02-03 00:46:40,466 [wrapper] ==== wrapper stderr END ====
[2026-02-02 19:46:41]  *** Error codes and diagnostics ***
[2026-02-02 19:46:41]     "exeErrorCode": 0,
[2026-02-02 19:46:41]     "exeErrorDiag": "",
[2026-02-02 19:46:41]     "pilotErrorCode": 0,
[2026-02-02 19:46:41]     "pilotErrorDiag": "",
[2026-02-02 19:46:41]  *** Listing of results directory ***
[2026-02-02 19:46:41] total 666392
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 13:47 pilot3.tar.gz
[2026-02-02 19:46:41] -rwx------. 1 boincer umatlas     36322 Jan 25 13:50 runpilot2-wrapper.sh
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 13:53 queuedata.json
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas       100 Feb  2 18:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 19:46:41] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 18:44 run_atlas
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas       105 Feb  2 18:44 job.xml
[2026-02-02 19:46:41] -rw-r--r--. 2 boincer umatlas 492187386 Feb  2 18:44 EVNT.48318032._000016.pool.root.1
[2026-02-02 19:46:41] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 18:44 start_atlas.sh
[2026-02-02 19:46:41] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 18:44 shared
[2026-02-02 19:46:41] -rw-r--r--. 2 boincer umatlas    597765 Feb  2 18:44 input.tar.gz
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas         0 Feb  2 18:44 boinc_lockfile
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas      2531 Feb  2 18:44 pandaJob.out
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas        57 Feb  2 18:44 setup.sh.local
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas   1009316 Feb  2 18:45 agis_schedconf.cvmfs.json
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas   1511668 Feb  2 18:45 agis_ddmendpoints.agis.ALL.json
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas       429 Feb  2 18:45 workernode_map.json
[2026-02-02 19:46:41] drwx------. 5 boincer umatlas      4096 Feb  2 18:45 pilot3
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas 184507943 Feb  2 19:44 HITS.48318034._000787.pool.root.1
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas       530 Feb  2 19:44 boinc_task_state.xml
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas        95 Feb  2 19:45 pilot_heartbeat.json
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas      1049 Feb  2 19:45 memory_monitor_summary.json
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas    368870 Feb  2 19:45 log.48318034._000787.job.log.tgz.1
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas      6353 Feb  2 19:45 heartbeat.json
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas      7169 Feb  2 19:46 init_data.xml
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas      4819 Feb  2 19:46 pilotlog.txt
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas    503000 Feb  2 19:46 log.48318034._000787.job.log.1
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas        27 Feb  2 19:46 wrapper_checkpoint.txt
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas       357 Feb  2 19:46 output.list
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 19:46 boinc_mmap_file
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas       620 Feb  2 19:46 runtime_log
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas    890880 Feb  2 19:46 result.tar.gz
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas      9333 Feb  2 19:46 runtime_log.err
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas       655 Feb  2 19:46 6hrKDmUNK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBb1KDmJUcYbn.diag
[2026-02-02 19:46:41] -rw-r--r--. 1 boincer umatlas     21411 Feb  2 19:46 stderr.txt
[2026-02-02 19:46:41] HITS file was successfully produced:
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas 184507943 Feb  2 19:44 shared/HITS.pool.root.1
[2026-02-02 19:46:41]  *** Contents of shared directory: ***
[2026-02-02 19:46:41] total 662316
[2026-02-02 19:46:41] -rw-r--r--. 2 boincer umatlas 492187386 Feb  2 18:44 ATLAS.root_0
[2026-02-02 19:46:41] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 18:44 start_atlas.sh
[2026-02-02 19:46:41] -rw-r--r--. 2 boincer umatlas    597765 Feb  2 18:44 input.tar.gz
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas 184507943 Feb  2 19:44 HITS.pool.root.1
[2026-02-02 19:46:41] -rw-------. 1 boincer umatlas    890880 Feb  2 19:46 result.tar.gz
19:46:42 (445972): run_atlas exited; CPU time 23673.498680
19:46:42 (445972): called boinc_finish(0)

</stderr_txt>
]]>

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