Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:49:37 (982482): wrapper (7.7.26015): starting
10:49:37 (982482): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 10:49:37] Arguments: --nthreads 4
[2026-02-03 10:49:37] Threads: 4
[2026-02-03 10:49:37] Checking for CVMFS
[2026-02-03 10:49:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 10:49:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 10:49:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 10:49:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 10:49:38] 2.9.2.0 3018 5645 94608 155824 2 50 24118310 36864001 0 130560 0 2748649 99.986 202881 13164 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-03 10:49:38] CVMFS is ok
[2026-02-03 10:49:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 10:49:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 10:49:38] Further information can be found at the LHC@home message board.
[2026-02-03 10:49:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 10:49:38] Checking for apptainer binary...
[2026-02-03 10:49:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 10:49:38] Running /usr/bin/apptainer --version
[2026-02-03 10:49:38] apptainer version 1.4.1-1.1
[2026-02-03 10:49:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 10:49:38] thA334
[2026-02-03 10:49:38] apptainer works
[2026-02-03 10:49:38] Set ATHENA_PROC_NUMBER=4
[2026-02-03 10:49:38] Set ATHENA_CORE_NUMBER=4
[2026-02-03 10:49:38] Starting ATLAS job with PandaID=6997220608
[2026-02-03 10:49:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 12:03:02]  *** The last 200 lines of the pilot log: ***
[2026-02-03 12:03:02] 2026-02-03 11:02:09,382 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 12:03:02] 2026-02-03 11:02:09,382 | INFO     | update_server=False
[2026-02-03 12:03:02] 2026-02-03 11:02:09,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 12:03:02] 2026-02-03 11:02:09,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:03:02] 2026-02-03 11:02:09,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 12:03:02] 2026-02-03 11:02:09,456 | INFO     | all job control threads have been joined
[2026-02-03 12:03:02] 2026-02-03 11:02:09,519 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 12:03:02] 2026-02-03 11:02:09,519 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 12:03:02] 2026-02-03 11:02:09,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:03:02] 2026-02-03 11:02:09,519 | INFO     | will abort loop
[2026-02-03 12:03:02] 2026-02-03 11:02:10,220 | INFO     | all data control threads have been joined
[2026-02-03 12:03:02] 2026-02-03 11:02:10,320 | INFO     | all payload control threads have been joined
[2026-02-03 12:03:02] 2026-02-03 11:02:10,388 | INFO     | [job] retrieve thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:10,388 | INFO     | [job] queue monitor thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:10,444 | INFO     | [payload] failed_post thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:10,462 | INFO     | [job] control thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:10,525 | INFO     | [job] job monitor thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:10,723 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:10,988 | INFO     | [job] validate thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:11,056 | INFO     | [payload] validate_post thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:11,061 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:11,143 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:11,225 | INFO     | [data] control thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:11,324 | INFO     | [data] copytool_in thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:11,326 | INFO     | [payload] control thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:11,389 | INFO     | [data] copytool_out thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:11,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 12:03:02] 2026-02-03 11:02:15,651 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:19,793 | INFO     | job.realtimelogging is not enabled
[2026-02-03 12:03:02] 2026-02-03 11:02:20,799 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 12:03:02] 2026-02-03 11:02:39,615 | INFO     | PID=986585 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 12:03:02] 2026-02-03 11:02:39,615 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 12:03:02] 2026-02-03 11:02:39,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 12:03:02] 2026-02-03 11:02:39,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 12:03:02] 2026-02-03 11:02:56,786 | INFO     | [monitor] cgroup control has ended
[2026-02-03 12:03:02] 2026-02-03 11:02:57,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139902118184768)>', '<ExcThread(monitor, started 139901102188288)>']
[2026-02-03 12:03:02] 2026-02-03 11:02:57,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 12:03:02] 2026-02-03 11:02:57,712 | INFO     | [monitor] control thread has ended
[2026-02-03 12:03:02] 2026-02-03 11:03:02,402 | INFO     | all workflow threads have been joined
[2026-02-03 12:03:02] 2026-02-03 11:03:02,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 12:03:02] 2026-02-03 11:03:02,403 | INFO     | traces error code: 0
[2026-02-03 12:03:02] 2026-02-03 11:03:02,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 12:03:02] 2026-02-03 11:03:02,473 [wrapper] ==== pilot stdout END ====
[2026-02-03 12:03:02] 2026-02-03 11:03:02,476 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 12:03:02] 2026-02-03 11:03:02,480 [wrapper] pilotpid: 986585
[2026-02-03 12:03:02] 2026-02-03 11:03:02,484 [wrapper] Pilot exit status: 0
[2026-02-03 12:03:02] 2026-02-03 11:03:02,495 [wrapper] pandaids: 6997220608
[2026-02-03 12:03:02] 2026-02-03 11:03:02,516 [wrapper] cleanup supervisor_pilot  996274 986586
[2026-02-03 12:03:02] 2026-02-03 11:03:02,520 [wrapper] Test setup, not cleaning
[2026-02-03 12:03:02] 2026-02-03 11:03:02,524 [wrapper] apfmon messages muted
[2026-02-03 12:03:02] 2026-02-03 11:03:02,527 [wrapper] ==== wrapper stdout END ====
[2026-02-03 12:03:02] 2026-02-03 11:03:02,530 [wrapper] ==== wrapper stderr END ====
[2026-02-03 12:03:02]  *** Error codes and diagnostics ***
[2026-02-03 12:03:02]     "exeErrorCode": 0,
[2026-02-03 12:03:02]     "exeErrorDiag": "",
[2026-02-03 12:03:02]     "pilotErrorCode": 0,
[2026-02-03 12:03:02]     "pilotErrorDiag": "",
[2026-02-03 12:03:02]  *** Listing of results directory ***
[2026-02-03 12:03:02] total 673064
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc    584422 Feb  2 18:56 pilot3.tar.gz
[2026-02-03 12:03:02] -rwx------ 1 boinc boinc     36322 Feb  2 18:57 runpilot2-wrapper.sh
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc      5111 Feb  2 18:57 queuedata.json
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc       100 Feb  3 10:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 12:03:02] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 10:49 run_atlas
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc       105 Feb  3 10:49 job.xml
[2026-02-03 12:03:02] -rw-r--r-- 2 boinc boinc 498697396 Feb  3 10:49 EVNT.48317929._000284.pool.root.1
[2026-02-03 12:03:02] -rw-r--r-- 2 boinc boinc    597757 Feb  3 10:49 input.tar.gz
[2026-02-03 12:03:02] -rw-r--r-- 2 boinc boinc     15845 Feb  3 10:49 start_atlas.sh
[2026-02-03 12:03:02] drwxrwx--x 2 boinc boinc      4096 Feb  3 10:49 shared
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc         0 Feb  3 10:49 boinc_setup_complete
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc      6369 Feb  3 10:49 init_data.xml
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc         0 Feb  3 10:49 boinc_lockfile
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc      2512 Feb  3 10:49 pandaJob.out
[2026-02-03 12:03:02] -rw------- 1 boinc boinc   1009258 Feb  3 10:49 agis_schedconf.cvmfs.json
[2026-02-03 12:03:02] -rw------- 1 boinc boinc   1511668 Feb  3 10:49 agis_ddmendpoints.agis.ALL.json
[2026-02-03 12:03:02] -rw------- 1 boinc boinc       426 Feb  3 10:49 workernode_map.json
[2026-02-03 12:03:02] drwx------ 5 boinc boinc      4096 Feb  3 10:49 pilot3
[2026-02-03 12:03:02] -rw------- 1 boinc boinc 184801008 Feb  3 12:01 HITS.48317931._015498.pool.root.1
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc       530 Feb  3 12:01 boinc_task_state.xml
[2026-02-03 12:03:02] -rw------- 1 boinc boinc      1024 Feb  3 12:02 memory_monitor_summary.json
[2026-02-03 12:03:02] -rw------- 1 boinc boinc    255251 Feb  3 12:02 log.48317931._015498.job.log.tgz.1
[2026-02-03 12:03:02] -rw------- 1 boinc boinc      6315 Feb  3 12:02 heartbeat.json
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc      8192 Feb  3 12:02 boinc_mmap_file
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc        27 Feb  3 12:02 wrapper_checkpoint.txt
[2026-02-03 12:03:02] -rw------- 1 boinc boinc        95 Feb  3 12:02 pilot_heartbeat.json
[2026-02-03 12:03:02] -rw------- 1 boinc boinc      5005 Feb  3 12:03 pilotlog.txt
[2026-02-03 12:03:02] -rw------- 1 boinc boinc    642043 Feb  3 12:03 log.48317931._015498.job.log.1
[2026-02-03 12:03:02] -rw------- 1 boinc boinc       357 Feb  3 12:03 output.list
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc       620 Feb  3 12:03 runtime_log
[2026-02-03 12:03:02] -rw------- 1 boinc boinc    911360 Feb  3 12:03 result.tar.gz
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc      8896 Feb  3 12:03 runtime_log.err
[2026-02-03 12:03:02] -rw------- 1 boinc boinc       657 Feb  3 12:03 MkNNDmsLD78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSFTKDms4pfNm.diag
[2026-02-03 12:03:02] -rw-r--r-- 1 boinc boinc      7836 Feb  3 12:03 stderr.txt
[2026-02-03 12:03:02] HITS file was successfully produced:
[2026-02-03 12:03:02] -rw------- 1 boinc boinc 184801008 Feb  3 12:01 shared/HITS.pool.root.1
[2026-02-03 12:03:02]  *** Contents of shared directory: ***
[2026-02-03 12:03:02] total 668984
[2026-02-03 12:03:02] -rw-r--r-- 2 boinc boinc 498697396 Feb  3 10:49 ATLAS.root_0
[2026-02-03 12:03:02] -rw-r--r-- 2 boinc boinc    597757 Feb  3 10:49 input.tar.gz
[2026-02-03 12:03:02] -rw-r--r-- 2 boinc boinc     15845 Feb  3 10:49 start_atlas.sh
[2026-02-03 12:03:02] -rw------- 1 boinc boinc 184801008 Feb  3 12:01 HITS.pool.root.1
[2026-02-03 12:03:02] -rw------- 1 boinc boinc    911360 Feb  3 12:03 result.tar.gz
12:03:25 (982482): run_atlas exited; CPU time 16391.991679
12:03:25 (982482): called boinc_finish(0)

</stderr_txt>
]]>

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