Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:28:47 (1388269): wrapper (7.7.26015): starting
13:28:47 (1388269): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 13:28:47] Arguments: --nthreads 4
[2026-02-03 13:28:47] Threads: 4
[2026-02-03 13:28:47] Checking for CVMFS
[2026-02-03 13:28:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 13:28:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 13:28:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 13:28:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 13:28:48] 2.9.2.0 1309670 155 56412 155828 1 50 30662481 36864001 0 130560 0 74463 99.975 5618 11512 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-03 13:28:48] CVMFS is ok
[2026-02-03 13:28:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 13:28:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 13:28:48] Further information can be found at the LHC@home message board.
[2026-02-03 13:28:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 13:28:48] Checking for apptainer binary...
[2026-02-03 13:28:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 13:28:48] Running /usr/bin/apptainer --version
[2026-02-03 13:28:48] apptainer version 1.4.1-1.1
[2026-02-03 13:28:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 13:28:48] atlasA237
[2026-02-03 13:28:48] apptainer works
[2026-02-03 13:28:48] Set ATHENA_PROC_NUMBER=4
[2026-02-03 13:28:48] Set ATHENA_CORE_NUMBER=4
[2026-02-03 13:28:48] Starting ATLAS job with PandaID=6997220666
[2026-02-03 13:28:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 14:43:12]  *** The last 200 lines of the pilot log: ***
[2026-02-03 14:43:12] 2026-02-03 13:42:30,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 14:43:12] 2026-02-03 13:42:30,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 14:43:12] 2026-02-03 13:42:30,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 14:43:12] 2026-02-03 13:42:30,208 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-03 14:43:12] 2026-02-03 13:42:30,208 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 14:43:12] 2026-02-03 13:42:30,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 14:43:12] 2026-02-03 13:42:30,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 14:43:12] 2026-02-03 13:42:30,590 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 14:43:12] 2026-02-03 13:42:30,590 | INFO     | all payload control threads have been joined
[2026-02-03 14:43:12] 2026-02-03 13:42:30,590 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 14:43:12] 2026-02-03 13:42:30,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 14:43:12] 2026-02-03 13:42:30,590 | INFO     | will abort loop
[2026-02-03 14:43:12] 2026-02-03 13:42:30,906 | INFO     | all job control threads have been joined
[2026-02-03 14:43:12] 2026-02-03 13:42:31,213 | INFO     | [job] retrieve thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,213 | INFO     | [job] queue monitor thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,234 | INFO     | all data control threads have been joined
[2026-02-03 14:43:12] 2026-02-03 13:42:31,593 | INFO     | [payload] control thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,596 | INFO     | [job] job monitor thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,618 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,681 | INFO     | [job] validate thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,788 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,908 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,911 | INFO     | [job] control thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:31,974 | INFO     | [data] copytool_in thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:32,122 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:32,213 | INFO     | [data] copytool_out thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:32,239 | INFO     | [data] control thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:32,557 | INFO     | [payload] validate_post thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:32,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 14:43:12] 2026-02-03 13:42:32,792 | INFO     | [payload] failed_post thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:42:36,657 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 14:43:12] 2026-02-03 13:43:05,693 | INFO     | [monitor] cgroup control has ended
[2026-02-03 14:43:12] 2026-02-03 13:43:07,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139948626167616)>', '<ExcThread(monitor, started 139947600238336)>']
[2026-02-03 14:43:12] 2026-02-03 13:43:08,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 14:43:12] 2026-02-03 13:43:08,396 | INFO     | [monitor] control thread has ended
[2026-02-03 14:43:12] 2026-02-03 13:43:12,554 | INFO     | all workflow threads have been joined
[2026-02-03 14:43:12] 2026-02-03 13:43:12,555 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 14:43:12] 2026-02-03 13:43:12,555 | INFO     | traces error code: 0
[2026-02-03 14:43:12] 2026-02-03 13:43:12,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 14:43:12] 2026-02-03 13:43:12,625 [wrapper] ==== pilot stdout END ====
[2026-02-03 14:43:12] 2026-02-03 13:43:12,629 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 14:43:12] 2026-02-03 13:43:12,633 [wrapper] pilotpid: 1392451
[2026-02-03 14:43:12] 2026-02-03 13:43:12,637 [wrapper] Pilot exit status: 0
[2026-02-03 14:43:12] 2026-02-03 13:43:12,648 [wrapper] pandaids: 6997220666
[2026-02-03 14:43:12] 2026-02-03 13:43:12,673 [wrapper] cleanup supervisor_pilot 1440068 1392452
[2026-02-03 14:43:12] 2026-02-03 13:43:12,677 [wrapper] Test setup, not cleaning
[2026-02-03 14:43:12] 2026-02-03 13:43:12,681 [wrapper] apfmon messages muted
[2026-02-03 14:43:12] 2026-02-03 13:43:12,685 [wrapper] ==== wrapper stdout END ====
[2026-02-03 14:43:12] 2026-02-03 13:43:12,689 [wrapper] ==== wrapper stderr END ====
[2026-02-03 14:43:12]  *** Error codes and diagnostics ***
[2026-02-03 14:43:12]     "exeErrorCode": 0,
[2026-02-03 14:43:12]     "exeErrorDiag": "",
[2026-02-03 14:43:12]     "pilotErrorCode": 0,
[2026-02-03 14:43:12]     "pilotErrorDiag": "",
[2026-02-03 14:43:12]  *** Listing of results directory ***
[2026-02-03 14:43:12] total 673012
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc    584422 Feb  2 18:56 pilot3.tar.gz
[2026-02-03 14:43:12] -rwx------ 1 boinc boinc     36322 Feb  2 18:57 runpilot2-wrapper.sh
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc      5111 Feb  2 18:57 queuedata.json
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc       100 Feb  3 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 14:43:12] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 13:28 run_atlas
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc       105 Feb  3 13:28 job.xml
[2026-02-03 14:43:12] -rw-r--r-- 2 boinc boinc 501292194 Feb  3 13:28 EVNT.48317929._000285.pool.root.1
[2026-02-03 14:43:12] -rw-r--r-- 2 boinc boinc    597755 Feb  3 13:28 input.tar.gz
[2026-02-03 14:43:12] -rw-r--r-- 2 boinc boinc     15845 Feb  3 13:28 start_atlas.sh
[2026-02-03 14:43:12] drwxrwx--x 2 boinc boinc      4096 Feb  3 13:28 shared
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc         0 Feb  3 13:28 boinc_setup_complete
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc      6371 Feb  3 13:28 init_data.xml
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc         0 Feb  3 13:28 boinc_lockfile
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc      2512 Feb  3 13:28 pandaJob.out
[2026-02-03 14:43:12] -rw------- 1 boinc boinc   1009250 Feb  3 13:28 agis_schedconf.cvmfs.json
[2026-02-03 14:43:12] -rw------- 1 boinc boinc   1511668 Feb  3 13:28 agis_ddmendpoints.agis.ALL.json
[2026-02-03 14:43:12] -rw------- 1 boinc boinc       423 Feb  3 13:28 workernode_map.json
[2026-02-03 14:43:12] drwx------ 5 boinc boinc      4096 Feb  3 13:29 pilot3
[2026-02-03 14:43:12] -rw------- 1 boinc boinc 182112716 Feb  3 14:42 HITS.48317931._015556.pool.root.1
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc       530 Feb  3 14:42 boinc_task_state.xml
[2026-02-03 14:43:12] -rw------- 1 boinc boinc      1026 Feb  3 14:42 memory_monitor_summary.json
[2026-02-03 14:43:12] -rw------- 1 boinc boinc        95 Feb  3 14:42 pilot_heartbeat.json
[2026-02-03 14:43:12] -rw------- 1 boinc boinc    268918 Feb  3 14:42 log.48317931._015556.job.log.tgz.1
[2026-02-03 14:43:12] -rw------- 1 boinc boinc      6319 Feb  3 14:42 heartbeat.json
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc      8192 Feb  3 14:43 boinc_mmap_file
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc        27 Feb  3 14:43 wrapper_checkpoint.txt
[2026-02-03 14:43:12] -rw------- 1 boinc boinc      4738 Feb  3 14:43 pilotlog.txt
[2026-02-03 14:43:12] -rw------- 1 boinc boinc    650017 Feb  3 14:43 log.48317931._015556.job.log.1
[2026-02-03 14:43:12] -rw------- 1 boinc boinc       357 Feb  3 14:43 output.list
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc       620 Feb  3 14:43 runtime_log
[2026-02-03 14:43:12] -rw------- 1 boinc boinc    931840 Feb  3 14:43 result.tar.gz
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc      8911 Feb  3 14:43 runtime_log.err
[2026-02-03 14:43:12] -rw------- 1 boinc boinc       660 Feb  3 14:43 jJFODmsLD78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm8FTKDm4zk4in.diag
[2026-02-03 14:43:12] -rw-r--r-- 1 boinc boinc      7487 Feb  3 14:43 stderr.txt
[2026-02-03 14:43:12] HITS file was successfully produced:
[2026-02-03 14:43:12] -rw------- 1 boinc boinc 182112716 Feb  3 14:42 shared/HITS.pool.root.1
[2026-02-03 14:43:12]  *** Contents of shared directory: ***
[2026-02-03 14:43:12] total 668912
[2026-02-03 14:43:12] -rw-r--r-- 2 boinc boinc 501292194 Feb  3 13:28 ATLAS.root_0
[2026-02-03 14:43:12] -rw-r--r-- 2 boinc boinc    597755 Feb  3 13:28 input.tar.gz
[2026-02-03 14:43:12] -rw-r--r-- 2 boinc boinc     15845 Feb  3 13:28 start_atlas.sh
[2026-02-03 14:43:12] -rw------- 1 boinc boinc 182112716 Feb  3 14:42 HITS.pool.root.1
[2026-02-03 14:43:12] -rw------- 1 boinc boinc    931840 Feb  3 14:43 result.tar.gz
14:43:13 (1388269): run_atlas exited; CPU time 16711.161405
14:43:13 (1388269): called boinc_finish(0)

</stderr_txt>
]]>

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