Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-04 21:08:56 (3584): vboxwrapper version 26210
2026-02-04 21:08:56 (3584): BOINC client version: 8.0.2
2026-02-04 21:09:03 (3584): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-02-04 21:09:04 (3584): Successfully copied 'init_data.xml' to the shared directory.
2026-02-04 21:09:05 (3584): Create VM. (boinc_5165149bc4da155b, slot#0)
2026-02-04 21:09:06 (3584): Setting Memory Size for VM. (4200MB)
2026-02-04 21:09:07 (3584): Setting CPU Count for VM. (2)
2026-02-04 21:09:07 (3584): Setting Chipset Options for VM.
2026-02-04 21:09:08 (3584): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-04 21:09:08 (3584): Setting Boot Options for VM.
2026-02-04 21:09:10 (3584): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-04 21:09:10 (3584): Enabling VM Network Access.
2026-02-04 21:09:11 (3584): Disabling USB Support for VM.
2026-02-04 21:09:11 (3584): Disabling COM Port Support for VM.
2026-02-04 21:09:12 (3584): Disabling LPT Port Support for VM.
2026-02-04 21:09:13 (3584): Disabling Audio Support for VM.
2026-02-04 21:09:13 (3584): Disabling Clipboard Support for VM.
2026-02-04 21:09:14 (3584): Disabling Drag and Drop Support for VM.
2026-02-04 21:09:14 (3584): Adding storage controller(s) to VM.
2026-02-04 21:09:15 (3584): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-04 21:09:20 (3584): Adding VirtualBox Guest Additions to VM.
2026-02-04 21:09:21 (3584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-04 21:09:21 (3584): forwarding host port 62862 to guest port 80
2026-02-04 21:09:22 (3584): Enabling remote desktop for VM.
2026-02-04 21:09:23 (3584): Enabling shared directory for VM.
2026-02-04 21:09:24 (3584): Starting VM using VBoxManage interface. (boinc_5165149bc4da155b, slot#0)
2026-02-04 21:09:46 (3584): Successfully started VM. (PID = '2708')
2026-02-04 21:09:46 (3584): Reporting VM Process ID to BOINC.
2026-02-04 21:09:46 (3584): Guest Log: BIOS: VirtualBox 7.0.6
2026-02-04 21:09:46 (3584): Guest Log: CPUID EDX: 0x178bfbff
2026-02-04 21:09:46 (3584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-04 21:09:46 (3584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-04 21:09:46 (3584): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-04 21:09:46 (3584): Detected: Web Application Enabled (http://localhost:62862)
2026-02-04 21:09:46 (3584): Detected: Remote Desktop Enabled (localhost:62865)
2026-02-04 21:09:47 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 21:09:55 (3584): Preference change detected
2026-02-04 21:09:55 (3584): Setting CPU throttle for VM. (1%)
2026-02-04 21:09:56 (3584): Setting checkpoint interval to 3600 seconds. (Higher value of (Preference: 3600 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-04 21:09:56 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 21:09:58 (3584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-04 21:09:58 (3584): Guest Log: BIOS: Booting from Hard Disk...
2026-02-04 21:10:25 (3584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-04 21:10:25 (3584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-04 21:10:25 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-04 21:10:26 (3584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-04 21:12:21 (3584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-04 21:12:21 (3584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-04 21:16:45 (3584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-04 21:16:45 (3584): Guest Log: 00:00:00.000517 main     Log opened 2026-02-04T21:16:35.085111000Z
2026-02-04 21:16:45 (3584): Guest Log: 00:00:00.000912 main     OS Product: Linux
2026-02-04 21:16:45 (3584): Guest Log: 00:00:00.001030 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-04 21:16:45 (3584): Guest Log: 00:00:00.001140 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-04 21:16:45 (3584): Guest Log: 00:00:00.001250 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-04 21:16:45 (3584): Guest Log: 00:00:00.001253 main     Process ID: 1324
2026-02-04 21:16:45 (3584): Guest Log: 00:00:00.001255 main     Package type: LINUX_64BITS_GENERIC
2026-02-04 21:16:45 (3584): Guest Log: 00:00:00.004083 main     5.2.32 r132073 started. Verbose level = 0
2026-02-04 21:16:50 (3584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-04 21:16:50 (3584): Guest Log: [INFO] Mounting shared directory
2026-02-04 21:16:53 (3584): Guest Log: [INFO] Checking for init_data.xml
2026-02-04 21:16:55 (3584): Guest Log: 00:00:10.250041 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 580 380 478 000ns (GuestNow=1 770 236 214 918 982 000 ns GuestLast=1 770 239 795 299 460 000 ns fSetTimeLastLoop=true )
2026-02-04 21:17:34 (3584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-04 21:17:34 (3584): Guest Log: [INFO] Detected branch: prod
2026-02-04 21:17:38 (3584): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-04 21:17:38 (3584): Guest Log: Copying input files
2026-02-04 21:19:45 (3584): Guest Log: Copied input files into RunAtlas.
2026-02-04 21:19:48 (3584): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-04 21:19:48 (3584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-04 21:19:48 (3584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-04 21:19:48 (3584): Guest Log: Further information can be found at the LHC@home message board.
2026-02-04 21:20:18 (3584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-04 21:20:25 (3584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-04 21:20:25 (3584): Guest Log: 2.6.3.0 1617 3 30128 155877 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-04 21:20:48 (3584): Guest Log: copied the webapp to /var/www
2026-02-04 21:20:50 (3584): Guest Log: ATHENA_PROC_NUMBER=2
2026-02-04 21:20:50 (3584): Guest Log: ATHENA_CORE_NUMBER=2
2026-02-04 21:20:53 (3584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-04 21:20:55 (3584): Guest Log:  *** Starting ATLAS job. (PandaID=6993547116 taskID=48431113) ***
2026-02-04 21:54:51 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 21:55:11 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 21:55:50 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 21:56:10 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 22:08:14 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 22:09:15 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 22:09:45 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 22:10:05 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 22:24:26 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 22:24:46 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 22:27:46 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 22:28:07 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 22:28:17 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 22:28:56 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 22:29:46 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 22:30:02 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 22:32:18 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 22:33:18 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 22:33:28 (3584): VM state change detected. (old = 'running', new = 'paused')
2026-02-04 23:00:20 (3584): VM state change detected. (old = 'paused', new = 'running')
2026-02-04 23:00:34 (3584): Guest Log:  *** Job finished ***
2026-02-04 23:00:34 (3584): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:25,105 | INFO     | found 0 job(s) in 20 queues
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:25,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:25,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:25,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:25,108 | INFO     | [monitor] control thread has ended
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:29,083 | INFO     | all workflow threads have been joined
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:29,084 | INFO     | end of generic workflow (traces error code: 0)
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:29,086 | INFO     | traces error code: 0
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:29,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:34,971 [wrapper] ==== pilot stdout END ====
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:35,276 [wrapper] ==== wrapper stdout RESUME ====
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:35,587 [wrapper] pilotpid: 6224
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:26:36,000 [wrapper] Pilot exit status: 0
2026-02-04 23:00:35 (3584): Guest Log: ./runpilot2-wrapper.sh: line 1019: /usr/bin/xargs: Input/output error
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:28:55,864 [wrapper] pandaids: 
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:28:58,625 [wrapper] cleanup supervisor_pilot 15551 6225
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:28:59,042 [wrapper] Test setup, not cleaning
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:28:59,456 [wrapper] apfmon messages muted
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:28:59,774 [wrapper] ==== wrapper stdout END ====
2026-02-04 23:00:35 (3584): Guest Log: 2026-02-04 21:29:00,188 [wrapper] ==== wrapper stderr END ====
2026-02-04 23:00:35 (3584): Guest Log:  *** Error codes and diagnostics ***
2026-02-04 23:00:35 (3584): Guest Log:     "exeErrorCode": 65,
2026-02-04 23:00:35 (3584): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2026-02-04 23:00:35 (3584): Guest Log:     "pilotErrorCode": 1305,
2026-02-04 23:00:35 (3584): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2026-02-04 23:00:36 (3584): Guest Log:  *** Listing of results directory ***
2026-02-04 23:00:36 (3584): Guest Log: total 4404
2026-02-04 23:00:36 (3584): Guest Log: -rw-r--r--. 1 atlas atlas  584422 Feb  2 15:51 pilot3.tar.gz
2026-02-04 23:00:36 (3584): Guest Log: -rwx------. 1 atlas atlas   36322 Feb  2 15:52 runpilot2-wrapper.sh
2026-02-04 23:00:36 (3584): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Feb  2 15:53 queuedata.json
2026-02-04 23:00:36 (3584): Guest Log: -rwxr-xr-x. 1 atlas atlas    6238 Feb  4 20:19 init_data.xml
2026-02-04 23:00:36 (3584): Guest Log: -rwxr-xr-x. 1 atlas atlas  597762 Feb  4 20:19 input.tar.gz
2026-02-04 23:00:36 (3584): Guest Log: -rwxr-xr-x. 1 atlas atlas   15845 Feb  4 20:19 start_atlas.sh
2026-02-04 23:00:36 (3584): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb  4 20:19 EVNT.48431111._000030.pool.root.1 -> /data/./ATLAS.root_0
2026-02-04 23:00:36 (3584): Guest Log: -rw-r--r--. 1 atlas atlas    2542 Feb  4 20:20 pandaJob.out
2026-02-04 23:00:36 (3584): Guest Log: -rw-------. 1 atlas atlas 1511668 Feb  4 20:35 agis_ddmendpoints.agis.ALL.json
2026-02-04 23:00:36 (3584): Guest Log: -rw-------. 1 atlas atlas     430 Feb  4 20:41 workernode_map.json
2026-02-04 23:00:36 (3584): Guest Log: -rw-------. 1 atlas atlas 1009552 Feb  4 20:42 agis_schedconf.cvmfs.json
2026-02-04 23:00:36 (3584): Guest Log: drwx------. 5 atlas atlas    4096 Feb  4 20:42 pilot3
2026-02-04 23:00:36 (3584): Guest Log: -rw-------. 1 atlas atlas    1008 Feb  4 21:20 memory_monitor_summary.json
2026-02-04 23:00:36 (3584): Guest Log: -rw-------. 1 atlas atlas   40873 Feb  4 21:23 log.48431113._001456.job.log.tgz.1
2026-02-04 23:00:36 (3584): Guest Log: -rw-------. 1 atlas atlas    6254 Feb  4 21:25 heartbeat.json
2026-02-04 23:00:36 (3584): Guest Log: -rw-------. 1 atlas atlas      95 Feb  4 21:25 pilot_heartbeat.json
2026-02-04 23:00:36 (3584): Guest Log: -rw-------. 1 atlas atlas    4802 Feb  4 21:26 pilotlog.txt
2026-02-04 23:00:37 (3584): Guest Log: -rw-------. 1 atlas atlas  284583 Feb  4 21:29 log.48431113._001456.job.log.1
2026-02-04 23:00:37 (3584): Guest Log: -rw-------. 1 atlas atlas     188 Feb  4 22:00 output.list
2026-02-04 23:00:37 (3584): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb  4 22:00 runtime_log
2026-02-04 23:00:37 (3584): Guest Log: -rw-------. 1 atlas atlas  337920 Feb  4 22:00 result.tar.gz
2026-02-04 23:00:37 (3584): Guest Log: -rw-r--r--. 1 atlas atlas    8668 Feb  4 22:00 runtime_log.err
2026-02-04 23:00:37 (3584): Guest Log: -rw-------. 1 atlas atlas     672 Feb  4 22:00 d1uMDmaPB78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm85SKDmoI28tn.diag
2026-02-04 23:00:37 (3584): Guest Log: Looking for outputfile HITS.48431113._001456.pool.root.1
2026-02-04 23:00:37 (3584): Guest Log: No HITS file was produced
2026-02-04 23:00:38 (3584): Guest Log: 01:12:27.362328 timesync vgsvcTimeSyncWorker: Radical guest time change: 1 895 715 502 000ns (GuestNow=1 770 242 437 671 477 000 ns GuestLast=1 770 240 541 955 975 000 ns fSetTimeLastLoop=true )
2026-02-04 23:00:38 (3584): Guest Log: Successfully finished the ATLAS job!
2026-02-04 23:00:38 (3584): Guest Log: Copying the results back to the shared directory!
2026-02-04 23:00:41 (3584): Guest Log:  *** Contents of shared directory: ***
2026-02-04 23:00:42 (3584): Guest Log: total 633920
2026-02-04 23:00:42 (3584): Guest Log: -rwxrwxrwx. 1 root root 648170192 Feb  4 20:08 ATLAS.root_0
2026-02-04 23:00:42 (3584): Guest Log: -rwxrwxrwx. 1 root root      6238 Feb  4 20:08 init_data.xml
2026-02-04 23:00:42 (3584): Guest Log: -rwxrwxrwx. 1 root root    597762 Feb  2 21:49 input.tar.gz
2026-02-04 23:00:42 (3584): Guest Log: -rwxrwxrwx. 1 root root    337920 Feb  4 22:00 result.tar.gz
2026-02-04 23:00:42 (3584): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  2 21:49 start_atlas.sh
2026-02-04 23:00:43 (3584): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-04 23:00:44 (3584): VM Completion File Detected.
2026-02-04 23:00:44 (3584): Powering off VM.
2026-02-04 23:00:46 (3584): Successfully stopped VM.
2026-02-04 23:00:46 (3584): Deregistering VM. (boinc_5165149bc4da155b, slot#0)
2026-02-04 23:00:47 (3584): Removing network bandwidth throttle group from VM.
2026-02-04 23:00:47 (3584): Removing VM from VirtualBox.
2026-02-04 23:00:53 (3584): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN