Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:46:49 (9069): wrapper (7.7.26015): starting
08:46:49 (9069): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 08:46:49] Arguments: --nthreads 8
[2026-02-03 08:46:49] Threads: 8
[2026-02-03 08:46:49] Checking for CVMFS
[2026-02-03 08:46:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 08:46:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 08:46:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 08:46:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 08:46:54] 2.11.2.0 18097 71133 133908 155822 3 87 24893223 25165824 3322 130560 0 25170863 99.781 20050870 2574 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-03 08:46:54] CVMFS is ok
[2026-02-03 08:46:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 08:46:54] Checking for apptainer binary...
[2026-02-03 08:46:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 08:46:54] Running /usr/bin/apptainer --version
[2026-02-03 08:46:54] apptainer version 1.3.2-1.el7
[2026-02-03 08:46:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 08:47:17] cg-vwn387.simple-grid.lan
[2026-02-03 08:47:17] apptainer works
[2026-02-03 08:47:17] Set ATHENA_PROC_NUMBER=8
[2026-02-03 08:47:17] Set ATHENA_CORE_NUMBER=8
[2026-02-03 08:47:17] Starting ATLAS job with PandaID=6983344478
[2026-02-03 08:47:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 13:10:24]  *** The last 200 lines of the pilot log: ***
[2026-02-03 13:10:24] 2026-02-03 12:09:36,545 | INFO     | reading metadata from: /var/lib/boinc/slots/16/PanDA_Pilot-6983344478/jobReport.json
[2026-02-03 13:10:24] 2026-02-03 12:09:36,548 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/16/workernode_map.json
[2026-02-03 13:10:24] 2026-02-03 12:09:36,549 | INFO     | this job has now completed (state=finished)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,549 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,549 | INFO     | log transfer has been attempted: DONE
[2026-02-03 13:10:24] 2026-02-03 12:09:36,549 | INFO     | job 6983344478 has finished - writing final server update
[2026-02-03 13:10:24] 2026-02-03 12:09:36,550 | INFO     | total number of processed events: 400 (read)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,552 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6983344478/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,552 | INFO     | extracted standard info from prmon json
[2026-02-03 13:10:24] 2026-02-03 12:09:36,553 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 13:10:24] 2026-02-03 12:09:36,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 13:10:24] 2026-02-03 12:09:36,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 13:10:24] 2026-02-03 12:09:36,553 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 13:10:24] 2026-02-03 12:09:36,558 | INFO     | fitting pss+swap vs Time
[2026-02-03 13:10:24] 2026-02-03 12:09:36,559 | INFO     | sum of square deviations: 4844974562.5
[2026-02-03 13:10:24] 2026-02-03 12:09:36,561 | INFO     | sum of deviations: 72879122859.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,561 | INFO     | mean x: 1770112925.5
[2026-02-03 13:10:24] 2026-02-03 12:09:36,562 | INFO     | mean y: 2446968.904
[2026-02-03 13:10:24] 2026-02-03 12:09:36,562 | INFO     | intersect: -26623962666.000748
[2026-02-03 13:10:24] 2026-02-03 12:09:36,562 | INFO     | chi2: 5.147869325688401
[2026-02-03 13:10:24] 2026-02-03 12:09:36,563 | INFO     | sum of square deviations: 4560048290.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,565 | INFO     | sum of deviations: 88079507411.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,565 | INFO     | mean x: 1770112773.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,565 | INFO     | mean y: 2454958.2897959184
[2026-02-03 13:10:24] 2026-02-03 12:09:36,565 | INFO     | intersect: -34188117420.003872
[2026-02-03 13:10:24] 2026-02-03 12:09:36,566 | INFO     | chi2: 4.38127044222702
[2026-02-03 13:10:24] 2026-02-03 12:09:36,566 | INFO     | current chi2=4.38127044222702 (change=14.891576202915113 %)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,566 | INFO     | right removable region: 244
[2026-02-03 13:10:24] 2026-02-03 12:09:36,567 | INFO     | sum of square deviations: 4560048290.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,569 | INFO     | sum of deviations: -7169480426.000002
[2026-02-03 13:10:24] 2026-02-03 12:09:36,569 | INFO     | mean x: 1770113078.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,569 | INFO     | mean y: 2489744.5918367347
[2026-02-03 13:10:24] 2026-02-03 12:09:36,570 | INFO     | intersect: 2785528488.3608456
[2026-02-03 13:10:24] 2026-02-03 12:09:36,570 | INFO     | chi2: 1.1547940850809335
[2026-02-03 13:10:24] 2026-02-03 12:09:36,570 | INFO     | current chi2=1.1547940850809335 (change=77.56753305064696 %)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,571 | INFO     | sum of square deviations: 4286517580.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,573 | INFO     | sum of deviations: -22768175641.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,573 | INFO     | mean x: 1770113230.5
[2026-02-03 13:10:24] 2026-02-03 12:09:36,573 | INFO     | mean y: 2498356.558333333
[2026-02-03 13:10:24] 2026-02-03 12:09:36,573 | INFO     | intersect: 9404594156.7771
[2026-02-03 13:10:24] 2026-02-03 12:09:36,574 | INFO     | chi2: 0.8878303231561083
[2026-02-03 13:10:24] 2026-02-03 12:09:36,574 | INFO     | current chi2=0.8878303231561083 (change=23.117867104949287 %)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,574 | INFO     | left removable region: 20
[2026-02-03 13:10:24] 2026-02-03 12:09:36,575 | INFO     | sum of square deviations: 3485088600.0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,576 | INFO     | sum of deviations: 5413929400.999999
[2026-02-03 13:10:24] 2026-02-03 12:09:36,577 | INFO     | mean x: 1770113352.5
[2026-02-03 13:10:24] 2026-02-03 12:09:36,577 | INFO     | mean y: 2500451.776785714
[2026-02-03 13:10:24] 2026-02-03 12:09:36,577 | INFO     | intersect: -2747291539.7962337
[2026-02-03 13:10:24] 2026-02-03 12:09:36,577 | INFO     | chi2: 0.0017761468206129879
[2026-02-03 13:10:24] 2026-02-03 12:09:36,578 | INFO     | current memory leak: 1.55 B/s (using 224 data points, chi2=0.00)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,578 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,578 | INFO     | ..............................
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | . Timing measurements:
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | . get job = 0 s
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | . initial setup = 85 s
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | . payload setup = 113 s
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | . stage-in = 0 s
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | . payload execution = 15345 s
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | . stage-out = 3 s
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | . log creation = 1 s
[2026-02-03 13:10:24] 2026-02-03 12:09:36,579 | INFO     | ..............................
[2026-02-03 13:10:24] 2026-02-03 12:09:36,747 | INFO     | 
[2026-02-03 13:10:24] 2026-02-03 12:09:36,748 | INFO     | job summary report
[2026-02-03 13:10:24] 2026-02-03 12:09:36,748 | INFO     | --------------------------------------------------
[2026-02-03 13:10:24] 2026-02-03 12:09:36,748 | INFO     | PanDA job id: 6983344478
[2026-02-03 13:10:24] 2026-02-03 12:09:36,748 | INFO     | task id: 48317872
[2026-02-03 13:10:24] 2026-02-03 12:09:36,748 | INFO     | errors: (none)
[2026-02-03 13:10:24] 2026-02-03 12:09:36,748 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 13:10:24] 2026-02-03 12:09:36,748 | INFO     | pilot state: finished 
[2026-02-03 13:10:24] 2026-02-03 12:09:36,748 | INFO     | transexitcode: 0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | exeerrorcode: 0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | exeerrordiag: 
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | exitcode: 0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | exitmsg: OK
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | cpuconsumptiontime: 56503 s
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | nevents: 400
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | neventsw: 0
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | pid: 17905
[2026-02-03 13:10:24] 2026-02-03 12:09:36,749 | INFO     | pgrp: 17905
[2026-02-03 13:10:24] 2026-02-03 12:09:36,750 | INFO     | corecount: 8
[2026-02-03 13:10:24] 2026-02-03 12:09:36,750 | INFO     | event service: False
[2026-02-03 13:10:24] 2026-02-03 12:09:36,750 | INFO     | sizes: {0: 2277823, 1: 2278284, 2: 2278284, 15461: 2309361, 15465: 2318361, 15468: 2318739}
[2026-02-03 13:10:24] 2026-02-03 12:09:36,750 | INFO     | --------------------------------------------------
[2026-02-03 13:10:24] 2026-02-03 12:09:36,750 | INFO     | 
[2026-02-03 13:10:24] 2026-02-03 12:09:36,750 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-02-03 13:10:24] 2026-02-03 12:09:37,255 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,257 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 13:10:24] 2026-02-03 12:09:37,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,258 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 13:10:24] 2026-02-03 12:09:37,258 | INFO     | job 6983344478 has completed (purged errors)
[2026-02-03 13:10:24] 2026-02-03 12:09:37,258 | INFO     | overall cleanup function is called
[2026-02-03 13:10:24] 2026-02-03 12:09:38,265 | INFO     | --- collectZombieJob: --- 10, [17905]
[2026-02-03 13:10:24] 2026-02-03 12:09:38,266 | INFO     | zombie collector waiting for pid 17905
[2026-02-03 13:10:24] 2026-02-03 12:09:38,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 13:10:24] 2026-02-03 12:09:38,266 | INFO     | collected zombie processes
[2026-02-03 13:10:24] 2026-02-03 12:09:38,266 | INFO     | will attempt to kill all subprocesses of pid=17905
[2026-02-03 13:10:24] 2026-02-03 12:09:38,392 | INFO     | process IDs to be killed: [17905] (in reverse order)
[2026-02-03 13:10:24] 2026-02-03 12:09:39,288 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 13:10:24] 2026-02-03 12:09:39,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 13:10:24] 2026-02-03 12:09:39,292 | INFO     | did not find any defunct processes belonging to 17905
[2026-02-03 13:10:24] 2026-02-03 12:09:39,295 | INFO     | did not find any defunct processes belonging to 17905
[2026-02-03 13:10:24] 2026-02-03 12:09:39,295 | INFO     | ready for new job
[2026-02-03 13:10:24] 2026-02-03 12:09:39,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 13:10:24] 2026-02-03 12:09:39,300 | INFO     | **************************************
[2026-02-03 13:10:24] 2026-02-03 12:09:39,301 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 13:10:24] 2026-02-03 12:09:39,301 | INFO     | **************************************
[2026-02-03 13:10:24] 2026-02-03 12:09:39,301 | INFO     | 
[2026-02-03 13:10:24] 2026-02-03 12:09:39,302 | INFO     | pilot is running in a VM
[2026-02-03 13:10:24] 2026-02-03 12:09:39,302 | INFO     | architecture information:
[2026-02-03 13:10:24] 2026-02-03 12:09:39,308 | INFO     | executing command: cat /etc/os-release
[2026-02-03 13:10:24] 2026-02-03 12:09:39,574 | INFO     | cat /etc/os-release:
[2026-02-03 13:10:24] NAME="CentOS Linux"
[2026-02-03 13:10:24] VERSION="7 (Core)"
[2026-02-03 13:10:24] ID="centos"
[2026-02-03 13:10:24] ID_LIKE="rhel fedora"
[2026-02-03 13:10:24] VERSION_ID="7"
[2026-02-03 13:10:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 13:10:24] ANSI_COLOR="0;31"
[2026-02-03 13:10:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 13:10:24] HOME_URL="https://www.centos.org/"
[2026-02-03 13:10:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 13:10:24] 
[2026-02-03 13:10:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 13:10:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 13:10:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 13:10:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 13:10:24] 
[2026-02-03 13:10:24] 2026-02-03 12:09:39,574 | INFO     | **************************************
[2026-02-03 13:10:24] 2026-02-03 12:09:40,077 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-02-03 13:10:24] 2026-02-03 12:09:40,338 | INFO     | sufficient remaining disk space (493060358144 B)
[2026-02-03 13:10:24] 2026-02-03 12:09:40,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 13:10:24] 2026-02-03 12:09:40,339 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 13:10:24] 2026-02-03 12:09:40,339 | INFO     | update_server=False
[2026-02-03 13:10:24] 2026-02-03 12:09:40,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 13:10:24] 2026-02-03 12:09:40,425 | INFO     | all payload control threads have been joined
[2026-02-03 13:10:24] 2026-02-03 12:09:40,485 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 13:10:24] 2026-02-03 12:09:40,486 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 13:10:24] 2026-02-03 12:09:40,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 13:10:24] 2026-02-03 12:09:40,486 | INFO     | will abort loop
[2026-02-03 13:10:24] 2026-02-03 12:09:40,645 | INFO     | all data control threads have been joined
[2026-02-03 13:10:24] 2026-02-03 12:09:41,061 | INFO     | all job control threads have been joined
[2026-02-03 13:10:24] 2026-02-03 12:09:41,345 | INFO     | [job] retrieve thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:41,431 | INFO     | [payload] control thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:41,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 13:10:24] 2026-02-03 12:09:41,491 | INFO     | [job] job monitor thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:41,595 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:41,629 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:41,651 | INFO     | [data] control thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:41,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 13:10:24] 2026-02-03 12:09:42,067 | INFO     | [job] control thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:42,125 | INFO     | [payload] failed_post thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:42,174 | INFO     | [job] validate thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:42,461 | INFO     | [payload] validate_post thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:42,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 13:10:24] 2026-02-03 12:09:42,725 | INFO     | [data] copytool_in thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:42,737 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:42,738 | INFO     | [job] queue monitor thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:43,486 | INFO     | [data] copytool_out thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:46,562 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:09:50,614 | INFO     | job.realtimelogging is not enabled
[2026-02-03 13:10:24] 2026-02-03 12:09:51,620 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 13:10:24] 2026-02-03 12:10:09,557 | INFO     | PID=13300 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 13:10:24] 2026-02-03 12:10:09,557 | INFO     | .. there are 9 such processes running
[2026-02-03 13:10:24] 2026-02-03 12:10:09,558 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 13:10:24] 2026-02-03 12:10:09,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 13:10:24] 2026-02-03 12:10:09,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 13:10:24] 2026-02-03 12:10:12,894 | INFO     | [monitor] cgroup control has ended
[2026-02-03 13:10:24] 2026-02-03 12:10:14,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679846487872)>', '<ExcThread(monitor, started 140678969423616)>']
[2026-02-03 13:10:24] 2026-02-03 12:10:14,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 13:10:24] 2026-02-03 12:10:14,588 | INFO     | [monitor] control thread has ended
[2026-02-03 13:10:24] 2026-02-03 12:10:19,384 | INFO     | all workflow threads have been joined
[2026-02-03 13:10:24] 2026-02-03 12:10:19,385 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 13:10:24] 2026-02-03 12:10:19,385 | INFO     | traces error code: 0
[2026-02-03 13:10:24] 2026-02-03 12:10:19,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 13:10:24] 2026-02-03 12:10:19,711 [wrapper] ==== pilot stdout END ====
[2026-02-03 13:10:24] 2026-02-03 12:10:19,763 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 13:10:24] 2026-02-03 12:10:19,861 [wrapper] pilotpid: 13300
[2026-02-03 13:10:24] 2026-02-03 12:10:19,919 [wrapper] Pilot exit status: 0
[2026-02-03 13:10:24] 2026-02-03 12:10:20,332 [wrapper] pandaids: 6983344478
[2026-02-03 13:10:24] 2026-02-03 12:10:21,167 [wrapper] cleanup supervisor_pilot  3231 13301
[2026-02-03 13:10:24] 2026-02-03 12:10:21,255 [wrapper] Test setup, not cleaning
[2026-02-03 13:10:24] 2026-02-03 12:10:21,383 [wrapper] apfmon messages muted
[2026-02-03 13:10:24] 2026-02-03 12:10:21,495 [wrapper] ==== wrapper stdout END ====
[2026-02-03 13:10:24] 2026-02-03 12:10:21,608 [wrapper] ==== wrapper stderr END ====
[2026-02-03 13:10:24]  *** Error codes and diagnostics ***
[2026-02-03 13:10:24]     "exeErrorCode": 0,
[2026-02-03 13:10:24]     "exeErrorDiag": "",
[2026-02-03 13:10:24]     "pilotErrorCode": 0,
[2026-02-03 13:10:24]     "pilotErrorDiag": "",
[2026-02-03 13:10:24]  *** Listing of results directory ***
[2026-02-03 13:10:24] total 671616
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc    584422 Jan 25 21:48 pilot3.tar.gz
[2026-02-03 13:10:24] -rwx------. 1 boinc boinc     36322 Jan 25 21:51 runpilot2-wrapper.sh
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc      5111 Jan 25 21:54 queuedata.json
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc       100 Feb  3 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 13:10:24] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 08:46 run_atlas
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc       105 Feb  3 08:46 job.xml
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc      6392 Feb  3 08:46 init_data.xml
[2026-02-03 13:10:24] -rw-r--r--. 2 boinc boinc 496330969 Feb  3 08:46 EVNT.48317869._000016.pool.root.1
[2026-02-03 13:10:24] -rw-r--r--. 2 boinc boinc     15845 Feb  3 08:46 start_atlas.sh
[2026-02-03 13:10:24] drwxrwx--x. 2 boinc boinc        68 Feb  3 08:46 shared
[2026-02-03 13:10:24] -rw-r--r--. 2 boinc boinc    597750 Feb  3 08:46 input.tar.gz
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc         0 Feb  3 08:46 boinc_lockfile
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc      2510 Feb  3 08:47 pandaJob.out
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc       415 Feb  3 08:51 workernode_map.json
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc   1009324 Feb  3 08:51 agis_schedconf.cvmfs.json
[2026-02-03 13:10:24] drwx------. 5 boinc boinc      4096 Feb  3 08:51 pilot3
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc 182211153 Feb  3 13:08 HITS.48317872._000760.pool.root.1
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc       532 Feb  3 13:08 boinc_task_state.xml
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc      1011 Feb  3 13:09 memory_monitor_summary.json
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc   1511668 Feb  3 13:09 agis_ddmendpoints.agis.ALL.json
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc    466915 Feb  3 13:09 log.48317872._000760.job.log.tgz.1
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc      6307 Feb  3 13:09 heartbeat.json
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc      8192 Feb  3 13:10 boinc_mmap_file
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc        28 Feb  3 13:10 wrapper_checkpoint.txt
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc        95 Feb  3 13:10 pilot_heartbeat.json
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc      5139 Feb  3 13:10 pilotlog.txt
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc   2164062 Feb  3 13:10 log.48317872._000760.job.log.1
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc       357 Feb  3 13:10 output.list
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc       620 Feb  3 13:10 runtime_log
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc   2652160 Feb  3 13:10 result.tar.gz
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc       655 Feb  3 13:10 U3DODmQGM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcp1KDm4bj0Gn.diag
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc      8832 Feb  3 13:10 runtime_log.err
[2026-02-03 13:10:24] -rw-r--r--. 1 boinc boinc     20860 Feb  3 13:10 stderr.txt
[2026-02-03 13:10:24] HITS file was successfully produced:
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc 182211153 Feb  3 13:08 shared/HITS.pool.root.1
[2026-02-03 13:10:24]  *** Contents of shared directory: ***
[2026-02-03 13:10:24] total 665836
[2026-02-03 13:10:24] -rw-r--r--. 2 boinc boinc 496330969 Feb  3 08:46 ATLAS.root_0
[2026-02-03 13:10:24] -rw-r--r--. 2 boinc boinc     15845 Feb  3 08:46 start_atlas.sh
[2026-02-03 13:10:24] -rw-r--r--. 2 boinc boinc    597750 Feb  3 08:46 input.tar.gz
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc 182211153 Feb  3 13:08 HITS.pool.root.1
[2026-02-03 13:10:24] -rw-------. 1 boinc boinc   2652160 Feb  3 13:10 result.tar.gz
13:10:26 (9069): run_atlas exited; CPU time 56750.771701
13:10:26 (9069): called boinc_finish(0)

</stderr_txt>
]]>

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