Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:18:34 (15074): wrapper (7.7.26015): starting
14:18:34 (15074): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 14:18:34] Arguments: --nthreads 8
[2026-02-02 14:18:34] Threads: 8
[2026-02-02 14:18:34] Checking for CVMFS
[2026-02-02 14:18:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 14:18:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 14:18:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 14:18:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 14:18:34] 2.11.2.0 5808 268702 120196 155802 2 187 10289740 18432000 2505 130560 0 196156953 99.962 12907944 8463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-02-02 14:18:34] CVMFS is ok
[2026-02-02 14:18:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 14:18:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 14:18:34] Further information can be found at the LHC@home message board.
[2026-02-02 14:18:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 14:18:34] Checking for apptainer binary...
[2026-02-02 14:18:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 14:18:34] Running /usr/bin/apptainer --version
[2026-02-02 14:18:34] apptainer version 1.3.2-1.el7
[2026-02-02 14:18:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 14:18:35] c-9-34.aglt2.org
[2026-02-02 14:18:35] apptainer works
[2026-02-02 14:18:35] Set ATHENA_PROC_NUMBER=8
[2026-02-02 14:18:35] Set ATHENA_CORE_NUMBER=8
[2026-02-02 14:18:35] Starting ATLAS job with PandaID=6996985622
[2026-02-02 14:18:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 18:11:17]  *** The last 200 lines of the pilot log: ***
[2026-02-02 18:11:17] 2026-02-02 23:10:34,031 | INFO     | log transfer has been attempted: DONE
[2026-02-02 18:11:17] 2026-02-02 23:10:34,031 | INFO     | job 6996985622 has finished - writing final server update
[2026-02-02 18:11:17] 2026-02-02 23:10:34,031 | INFO     | total number of processed events: 400 (read)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,034 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6996985622/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,035 | INFO     | extracted standard info from prmon json
[2026-02-02 18:11:17] 2026-02-02 23:10:34,035 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 18:11:17] 2026-02-02 23:10:34,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 18:11:17] 2026-02-02 23:10:34,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 18:11:17] 2026-02-02 23:10:34,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 18:11:17] 2026-02-02 23:10:34,038 | INFO     | fitting pss+swap vs Time
[2026-02-02 18:11:17] 2026-02-02 23:10:34,038 | INFO     | sum of square deviations: 3675146117.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,039 | INFO     | sum of deviations: 13545313611.500002
[2026-02-02 18:11:17] 2026-02-02 23:10:34,039 | INFO     | mean x: 1770066872.5
[2026-02-02 18:11:17] 2026-02-02 23:10:34,040 | INFO     | mean y: 2543964.26754386
[2026-02-02 18:11:17] 2026-02-02 23:10:34,040 | INFO     | intersect: -6521308459.023601
[2026-02-02 18:11:17] 2026-02-02 23:10:34,040 | INFO     | chi2: 1.3522524481081368
[2026-02-02 18:11:17] 2026-02-02 23:10:34,040 | INFO     | sum of square deviations: 3438620752.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,041 | INFO     | sum of deviations: 12953100082.999994
[2026-02-02 18:11:17] 2026-02-02 23:10:34,041 | INFO     | mean x: 1770066720.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,042 | INFO     | mean y: 2543585.2197309416
[2026-02-02 18:11:17] 2026-02-02 23:10:34,042 | INFO     | intersect: -6665202883.887696
[2026-02-02 18:11:17] 2026-02-02 23:10:34,042 | INFO     | chi2: 1.3524126103066454
[2026-02-02 18:11:17] 2026-02-02 23:10:34,042 | INFO     | current chi2=1.3524126103066454 (change=-0.01184410490309235 %)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,042 | INFO     | right removable region: 222
[2026-02-02 18:11:17] 2026-02-02 23:10:34,042 | INFO     | sum of square deviations: 3438620752.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,043 | INFO     | sum of deviations: -18849480619.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,043 | INFO     | mean x: 1770067025.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,044 | INFO     | mean y: 2564649.4573991033
[2026-02-02 18:11:17] 2026-02-02 23:10:34,044 | INFO     | intersect: 9705537582.038738
[2026-02-02 18:11:17] 2026-02-02 23:10:34,044 | INFO     | chi2: 0.08763407648922772
[2026-02-02 18:11:17] 2026-02-02 23:10:34,044 | INFO     | current chi2=0.08763407648922772 (change=93.5193996792661 %)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,044 | INFO     | sum of square deviations: 3212467674.5
[2026-02-02 18:11:17] 2026-02-02 23:10:34,045 | INFO     | sum of deviations: -22653564815.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,045 | INFO     | mean x: 1770067177.5
[2026-02-02 18:11:17] 2026-02-02 23:10:34,046 | INFO     | mean y: 2567175.7155963304
[2026-02-02 18:11:17] 2026-02-02 23:10:34,046 | INFO     | intersect: 12484663680.746237
[2026-02-02 18:11:17] 2026-02-02 23:10:34,046 | INFO     | chi2: 0.052939214030761954
[2026-02-02 18:11:17] 2026-02-02 23:10:34,046 | INFO     | current chi2=0.052939214030761954 (change=39.59060658638946 %)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,046 | INFO     | sum of square deviations: 2996454322.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,047 | INFO     | sum of deviations: -20712715432.000004
[2026-02-02 18:11:17] 2026-02-02 23:10:34,047 | INFO     | mean x: 1770067330.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,047 | INFO     | mean y: 2565802.784037559
[2026-02-02 18:11:17] 2026-02-02 23:10:34,048 | INFO     | intersect: 12237993732.584476
[2026-02-02 18:11:17] 2026-02-02 23:10:34,048 | INFO     | chi2: 0.05274577799121889
[2026-02-02 18:11:17] 2026-02-02 23:10:34,048 | INFO     | current chi2=0.05274577799121889 (change=0.3653927302937659 %)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,048 | INFO     | left removable region: 30
[2026-02-02 18:11:17] 2026-02-02 23:10:34,048 | INFO     | sum of square deviations: 2194675568.0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,049 | INFO     | sum of deviations: -11325062756.500002
[2026-02-02 18:11:17] 2026-02-02 23:10:34,049 | INFO     | mean x: 1770067604.5
[2026-02-02 18:11:17] 2026-02-02 23:10:34,049 | INFO     | mean y: 2558381.8697916665
[2026-02-02 18:11:17] 2026-02-02 23:10:34,049 | INFO     | intersect: 9136540186.058777
[2026-02-02 18:11:17] 2026-02-02 23:10:34,050 | INFO     | chi2: 0.04212831925488461
[2026-02-02 18:11:17] 2026-02-02 23:10:34,050 | INFO     | current memory leak: -5.16 B/s (using 192 data points, chi2=0.04)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,050 | INFO     | could have reported an average CPU frequency of 2999 MHz (11 samples)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,050 | INFO     | ..............................
[2026-02-02 18:11:17] 2026-02-02 23:10:34,050 | INFO     | . Timing measurements:
[2026-02-02 18:11:17] 2026-02-02 23:10:34,050 | INFO     | . get job = 0 s
[2026-02-02 18:11:17] 2026-02-02 23:10:34,051 | INFO     | . initial setup = 5 s
[2026-02-02 18:11:17] 2026-02-02 23:10:34,051 | INFO     | . payload setup = 4 s
[2026-02-02 18:11:17] 2026-02-02 23:10:34,051 | INFO     | . stage-in = 0 s
[2026-02-02 18:11:17] 2026-02-02 23:10:34,051 | INFO     | . payload execution = 13882 s
[2026-02-02 18:11:17] 2026-02-02 23:10:34,051 | INFO     | . stage-out = 2 s
[2026-02-02 18:11:17] 2026-02-02 23:10:34,051 | INFO     | . log creation = 0 s
[2026-02-02 18:11:17] 2026-02-02 23:10:34,051 | INFO     | ..............................
[2026-02-02 18:11:17] 2026-02-02 23:10:34,115 | INFO     | 
[2026-02-02 18:11:17] 2026-02-02 23:10:34,116 | INFO     | job summary report
[2026-02-02 18:11:17] 2026-02-02 23:10:34,116 | INFO     | --------------------------------------------------
[2026-02-02 18:11:17] 2026-02-02 23:10:34,116 | INFO     | PanDA job id: 6996985622
[2026-02-02 18:11:17] 2026-02-02 23:10:34,116 | INFO     | task id: 48431080
[2026-02-02 18:11:17] 2026-02-02 23:10:34,116 | INFO     | errors: (none)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,116 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 18:11:17] 2026-02-02 23:10:34,116 | INFO     | pilot state: finished 
[2026-02-02 18:11:17] 2026-02-02 23:10:34,117 | INFO     | transexitcode: 0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,117 | INFO     | exeerrorcode: 0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,117 | INFO     | exeerrordiag: 
[2026-02-02 18:11:17] 2026-02-02 23:10:34,117 | INFO     | exitcode: 0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,117 | INFO     | exitmsg: OK
[2026-02-02 18:11:17] 2026-02-02 23:10:34,117 | INFO     | cpuconsumptiontime: 105233 s
[2026-02-02 18:11:17] 2026-02-02 23:10:34,117 | INFO     | nevents: 400
[2026-02-02 18:11:17] 2026-02-02 23:10:34,118 | INFO     | neventsw: 0
[2026-02-02 18:11:17] 2026-02-02 23:10:34,118 | INFO     | pid: 23283
[2026-02-02 18:11:17] 2026-02-02 23:10:34,118 | INFO     | pgrp: 23283
[2026-02-02 18:11:17] 2026-02-02 23:10:34,118 | INFO     | corecount: 8
[2026-02-02 18:11:17] 2026-02-02 23:10:34,118 | INFO     | event service: False
[2026-02-02 18:11:17] 2026-02-02 23:10:34,118 | INFO     | sizes: {0: 2277875, 1: 2278336, 11: 2278336, 13891: 2308669, 13893: 2317667, 13894: 2318045}
[2026-02-02 18:11:17] 2026-02-02 23:10:34,118 | INFO     | --------------------------------------------------
[2026-02-02 18:11:17] 2026-02-02 23:10:34,119 | INFO     | 
[2026-02-02 18:11:17] 2026-02-02 23:10:34,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-02 18:11:17] 2026-02-02 23:10:34,139 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,139 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,139 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,139 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,142 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,142 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 18:11:17] 2026-02-02 23:10:34,142 | INFO     | job 6996985622 has completed (purged errors)
[2026-02-02 18:11:17] 2026-02-02 23:10:34,143 | INFO     | overall cleanup function is called
[2026-02-02 18:11:17] 2026-02-02 23:10:35,150 | INFO     | --- collectZombieJob: --- 10, [23283]
[2026-02-02 18:11:17] 2026-02-02 23:10:35,150 | INFO     | zombie collector waiting for pid 23283
[2026-02-02 18:11:17] 2026-02-02 23:10:35,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 18:11:17] 2026-02-02 23:10:35,151 | INFO     | collected zombie processes
[2026-02-02 18:11:17] 2026-02-02 23:10:35,151 | INFO     | will attempt to kill all subprocesses of pid=23283
[2026-02-02 18:11:17] 2026-02-02 23:10:35,401 | INFO     | process IDs to be killed: [23283] (in reverse order)
[2026-02-02 18:11:17] 2026-02-02 23:10:35,458 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 18:11:17] 2026-02-02 23:10:35,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 18:11:17] 2026-02-02 23:10:35,467 | INFO     | did not find any defunct processes belonging to 23283
[2026-02-02 18:11:17] 2026-02-02 23:10:35,474 | INFO     | did not find any defunct processes belonging to 23283
[2026-02-02 18:11:17] 2026-02-02 23:10:35,474 | INFO     | ready for new job
[2026-02-02 18:11:17] 2026-02-02 23:10:35,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 18:11:17] 2026-02-02 23:10:35,476 | INFO     | **************************************
[2026-02-02 18:11:17] 2026-02-02 23:10:35,476 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 18:11:17] 2026-02-02 23:10:35,477 | INFO     | **************************************
[2026-02-02 18:11:17] 2026-02-02 23:10:35,477 | INFO     | 
[2026-02-02 18:11:17] 2026-02-02 23:10:35,478 | INFO     | architecture information:
[2026-02-02 18:11:17] 2026-02-02 23:10:35,479 | INFO     | executing command: cat /etc/os-release
[2026-02-02 18:11:17] 2026-02-02 23:10:35,492 | INFO     | cat /etc/os-release:
[2026-02-02 18:11:17] NAME="CentOS Linux"
[2026-02-02 18:11:17] VERSION="7 (Core)"
[2026-02-02 18:11:17] ID="centos"
[2026-02-02 18:11:17] ID_LIKE="rhel fedora"
[2026-02-02 18:11:17] VERSION_ID="7"
[2026-02-02 18:11:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 18:11:17] ANSI_COLOR="0;31"
[2026-02-02 18:11:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 18:11:17] HOME_URL="https://www.centos.org/"
[2026-02-02 18:11:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 18:11:17] 
[2026-02-02 18:11:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 18:11:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 18:11:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 18:11:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 18:11:17] 
[2026-02-02 18:11:17] 2026-02-02 23:10:35,492 | INFO     | **************************************
[2026-02-02 18:11:17] 2026-02-02 23:10:35,994 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-02 18:11:17] 2026-02-02 23:10:36,007 | INFO     | sufficient remaining disk space (102312706048 B)
[2026-02-02 18:11:17] 2026-02-02 23:10:36,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 18:11:17] 2026-02-02 23:10:36,008 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 18:11:17] 2026-02-02 23:10:36,008 | INFO     | update_server=False
[2026-02-02 18:11:17] 2026-02-02 23:10:36,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 18:11:17] 2026-02-02 23:10:36,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 18:11:17] 2026-02-02 23:10:36,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 18:11:17] 2026-02-02 23:10:36,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 18:11:17] 2026-02-02 23:10:36,009 | INFO     | aborting loop
[2026-02-02 18:11:17] 2026-02-02 23:10:36,362 | INFO     | all job control threads have been joined
[2026-02-02 18:11:17] 2026-02-02 23:10:36,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 18:11:17] 2026-02-02 23:10:36,527 | INFO     | all payload control threads have been joined
[2026-02-02 18:11:17] 2026-02-02 23:10:36,649 | INFO     | all data control threads have been joined
[2026-02-02 18:11:17] 2026-02-02 23:10:37,013 | INFO     | [job] retrieve thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,014 | INFO     | [job] job monitor thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,015 | INFO     | [job] queue monitor thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,234 | INFO     | [job] validate thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,368 | INFO     | [job] control thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,533 | INFO     | [payload] control thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,623 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,635 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,654 | INFO     | [data] control thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:37,835 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:38,136 | INFO     | [payload] failed_post thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:38,242 | INFO     | [data] copytool_in thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:38,340 | INFO     | [payload] validate_post thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:38,458 | INFO     | [data] copytool_out thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:40,015 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:10:47,048 | INFO     | job.realtimelogging is not enabled
[2026-02-02 18:11:17] 2026-02-02 23:10:48,054 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 18:11:17] 2026-02-02 23:11:06,910 | INFO     | PID=18856 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 18:11:17] 2026-02-02 23:11:06,910 | INFO     | .. there are 4 such processes running
[2026-02-02 18:11:17] 2026-02-02 23:11:06,911 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 18:11:17] 2026-02-02 23:11:06,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 18:11:17] 2026-02-02 23:11:06,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 18:11:17] 2026-02-02 23:11:11,434 | INFO     | [monitor] cgroup control has ended
[2026-02-02 18:11:17] 2026-02-02 23:11:11,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262116190016)>', '<ExcThread(monitor, started 140261527111424)>']
[2026-02-02 18:11:17] 2026-02-02 23:11:12,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 18:11:17] 2026-02-02 23:11:12,938 | INFO     | [monitor] control thread has ended
[2026-02-02 18:11:17] 2026-02-02 23:11:17,000 | INFO     | all workflow threads have been joined
[2026-02-02 18:11:17] 2026-02-02 23:11:17,000 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 18:11:17] 2026-02-02 23:11:17,001 | INFO     | traces error code: 0
[2026-02-02 18:11:17] 2026-02-02 23:11:17,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 18:11:17] 2026-02-02 23:11:17,079 [wrapper] ==== pilot stdout END ====
[2026-02-02 18:11:17] 2026-02-02 23:11:17,082 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 18:11:17] 2026-02-02 23:11:17,084 [wrapper] pilotpid: 18856
[2026-02-02 18:11:17] 2026-02-02 23:11:17,087 [wrapper] Pilot exit status: 0
[2026-02-02 18:11:17] 2026-02-02 23:11:17,100 [wrapper] pandaids: 6996985622
[2026-02-02 18:11:17] 2026-02-02 23:11:17,153 [wrapper] cleanup supervisor_pilot 41469 18857
[2026-02-02 18:11:17] 2026-02-02 23:11:17,155 [wrapper] Test setup, not cleaning
[2026-02-02 18:11:17] 2026-02-02 23:11:17,157 [wrapper] apfmon messages muted
[2026-02-02 18:11:17] 2026-02-02 23:11:17,159 [wrapper] ==== wrapper stdout END ====
[2026-02-02 18:11:17] 2026-02-02 23:11:17,162 [wrapper] ==== wrapper stderr END ====
[2026-02-02 18:11:17]  *** Error codes and diagnostics ***
[2026-02-02 18:11:17]     "exeErrorCode": 0,
[2026-02-02 18:11:17]     "exeErrorDiag": "",
[2026-02-02 18:11:17]     "pilotErrorCode": 0,
[2026-02-02 18:11:17]     "pilotErrorDiag": "",
[2026-02-02 18:11:17]  *** Listing of results directory ***
[2026-02-02 18:11:17] total 886220
[2026-02-02 18:11:17] -rwx------ 1 boincer umatlas     36322 Feb  2 08:12 runpilot2-wrapper.sh
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas      5111 Feb  2 08:12 queuedata.json
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas    584422 Feb  2 08:12 pilot3.tar.gz
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas       100 Feb  2 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 18:11:17] -rwxr-xr-x 1 boincer umatlas      7986 Feb  2 14:18 run_atlas
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas       105 Feb  2 14:18 job.xml
[2026-02-02 18:11:17] -rw-r--r-- 2 boincer umatlas 644652473 Feb  2 14:18 EVNT.48431078._000133.pool.root.1
[2026-02-02 18:11:17] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 14:18 start_atlas.sh
[2026-02-02 18:11:17] drwxrwx--x 2 boincer umatlas      4096 Feb  2 14:18 shared
[2026-02-02 18:11:17] -rw-r--r-- 2 boincer umatlas    597753 Feb  2 14:18 input.tar.gz
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas         0 Feb  2 14:18 boinc_lockfile
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas      2554 Feb  2 14:18 pandaJob.out
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas        57 Feb  2 14:18 setup.sh.local
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas   1009324 Feb  2 14:18 agis_schedconf.cvmfs.json
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas       438 Feb  2 14:18 workernode_map.json
[2026-02-02 18:11:17] drwx------ 5 boincer umatlas      4096 Feb  2 14:18 pilot3
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas      6038 Feb  2 18:02 init_data.xml
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas 254150599 Feb  2 18:09 HITS.48431080._006927.pool.root.1
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas       532 Feb  2 18:10 boinc_task_state.xml
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas      1049 Feb  2 18:10 memory_monitor_summary.json
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas   1511668 Feb  2 18:10 agis_ddmendpoints.agis.ALL.json
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas    445242 Feb  2 18:10 log.48431080._006927.job.log.tgz.1
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas      6401 Feb  2 18:10 heartbeat.json
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas        95 Feb  2 18:11 pilot_heartbeat.json
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas        29 Feb  2 18:11 wrapper_checkpoint.txt
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas      8192 Feb  2 18:11 boinc_mmap_file
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas      4890 Feb  2 18:11 pilotlog.txt
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas   1925550 Feb  2 18:11 log.48431080._006927.job.log.1
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas       357 Feb  2 18:11 output.list
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas       620 Feb  2 18:11 runtime_log
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas   2385920 Feb  2 18:11 result.tar.gz
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas      9332 Feb  2 18:11 runtime_log.err
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas       660 Feb  2 18:11 J3ZNDmNu868n9Rq4apOajLDm4fhM0noT9bVooX4SDm0NSKDmXzidIo.diag
[2026-02-02 18:11:17] -rw-r--r-- 1 boincer umatlas     20997 Feb  2 18:11 stderr.txt
[2026-02-02 18:11:17] HITS file was successfully produced:
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas 254150599 Feb  2 18:09 shared/HITS.pool.root.1
[2026-02-02 18:11:17]  *** Contents of shared directory: ***
[2026-02-02 18:11:17] total 880680
[2026-02-02 18:11:17] -rw-r--r-- 2 boincer umatlas 644652473 Feb  2 14:18 ATLAS.root_0
[2026-02-02 18:11:17] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 14:18 start_atlas.sh
[2026-02-02 18:11:17] -rw-r--r-- 2 boincer umatlas    597753 Feb  2 14:18 input.tar.gz
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas 254150599 Feb  2 18:09 HITS.pool.root.1
[2026-02-02 18:11:17] -rw------- 1 boincer umatlas   2385920 Feb  2 18:11 result.tar.gz
18:11:19 (15074): run_atlas exited; CPU time 105569.385943
18:11:19 (15074): called boinc_finish(0)

</stderr_txt>
]]>

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