Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:30:14 (12560): wrapper (7.7.26015): starting
05:30:14 (12560): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 05:30:14] Arguments: --nthreads 8
[2026-02-03 05:30:14] Threads: 8
[2026-02-03 05:30:14] Checking for CVMFS
[2026-02-03 05:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 05:30:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 05:30:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 05:30:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 05:30:19] 2.11.2.0 23466 70920 133512 155817 1 54 19305355 25165825 96 130560 0 24521498 99.794 19639701 2220 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-03 05:30:19] CVMFS is ok
[2026-02-03 05:30:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 05:30:19] Checking for apptainer binary...
[2026-02-03 05:30:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 05:30:19] Running /usr/bin/apptainer --version
[2026-02-03 05:30:19] apptainer version 1.3.2-1.el7
[2026-02-03 05:30:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 05:30:38] cg-vwn389.simple-grid.lan
[2026-02-03 05:30:38] apptainer works
[2026-02-03 05:30:38] Set ATHENA_PROC_NUMBER=8
[2026-02-03 05:30:38] Set ATHENA_CORE_NUMBER=8
[2026-02-03 05:30:38] Starting ATLAS job with PandaID=6996985649
[2026-02-03 05:30:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 11:17:10]  *** The last 200 lines of the pilot log: ***
[2026-02-03 11:17:10] 2026-02-03 10:16:04,664 | INFO     | log transfer has been attempted: DONE
[2026-02-03 11:17:10] 2026-02-03 10:16:04,664 | INFO     | job 6996985649 has finished - writing final server update
[2026-02-03 11:17:10] 2026-02-03 10:16:04,664 | INFO     | total number of processed events: 400 (read)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,666 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6996985649/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,667 | INFO     | extracted standard info from prmon json
[2026-02-03 11:17:10] 2026-02-03 10:16:04,667 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 11:17:10] 2026-02-03 10:16:04,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 11:17:10] 2026-02-03 10:16:04,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 11:17:10] 2026-02-03 10:16:04,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 11:17:10] 2026-02-03 10:16:04,674 | INFO     | fitting pss+swap vs Time
[2026-02-03 11:17:10] 2026-02-03 10:16:04,675 | INFO     | sum of square deviations: 11042365180.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,678 | INFO     | sum of deviations: 138015401709.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,679 | INFO     | mean x: 1770103749.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,679 | INFO     | mean y: 2485961.6443768996
[2026-02-03 11:17:10] 2026-02-03 10:16:04,679 | INFO     | intersect: -22121540549.20879
[2026-02-03 11:17:10] 2026-02-03 10:16:04,679 | INFO     | chi2: 8.042211863528017
[2026-02-03 11:17:10] 2026-02-03 10:16:04,680 | INFO     | sum of square deviations: 10546523325.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,687 | INFO     | sum of deviations: 180254308625.99997
[2026-02-03 11:17:10] 2026-02-03 10:16:04,688 | INFO     | mean x: 1770103596.5
[2026-02-03 11:17:10] 2026-02-03 10:16:04,688 | INFO     | mean y: 2498826.1975308643
[2026-02-03 11:17:10] 2026-02-03 10:16:04,688 | INFO     | intersect: -30250959128.72559
[2026-02-03 11:17:10] 2026-02-03 10:16:04,688 | INFO     | chi2: 6.5595844893462125
[2026-02-03 11:17:10] 2026-02-03 10:16:04,689 | INFO     | current chi2=6.5595844893462125 (change=18.435567221321556 %)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,689 | INFO     | right removable region: 323
[2026-02-03 11:17:10] 2026-02-03 10:16:04,689 | INFO     | sum of square deviations: 10546523325.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,693 | INFO     | sum of deviations: 25192944062.999996
[2026-02-03 11:17:10] 2026-02-03 10:16:04,693 | INFO     | mean x: 1770103901.5
[2026-02-03 11:17:10] 2026-02-03 10:16:04,693 | INFO     | mean y: 2520639.4197530863
[2026-02-03 11:17:10] 2026-02-03 10:16:04,693 | INFO     | intersect: -4225804392.6293797
[2026-02-03 11:17:10] 2026-02-03 10:16:04,694 | INFO     | chi2: 3.5994155759860536
[2026-02-03 11:17:10] 2026-02-03 10:16:04,694 | INFO     | current chi2=3.5994155759860536 (change=55.24346240728063 %)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,694 | INFO     | sum of square deviations: 10065751520.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,697 | INFO     | sum of deviations: -46251871522.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,698 | INFO     | mean x: 1770104054.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,698 | INFO     | mean y: 2543235.7711598747
[2026-02-03 11:17:10] 2026-02-03 10:16:04,698 | INFO     | intersect: 8136126219.963417
[2026-02-03 11:17:10] 2026-02-03 10:16:04,698 | INFO     | chi2: 1.7178380130272615
[2026-02-03 11:17:10] 2026-02-03 10:16:04,698 | INFO     | current chi2=1.7178380130272615 (change=52.27452966286998 %)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,699 | INFO     | sum of square deviations: 9599817202.5
[2026-02-03 11:17:10] 2026-02-03 10:16:04,702 | INFO     | sum of deviations: -49429467082.5
[2026-02-03 11:17:10] 2026-02-03 10:16:04,702 | INFO     | mean x: 1770104206.5
[2026-02-03 11:17:10] 2026-02-03 10:16:04,702 | INFO     | mean y: 2544246.8694267515
[2026-02-03 11:17:10] 2026-02-03 10:16:04,702 | INFO     | intersect: 9116812337.82858
[2026-02-03 11:17:10] 2026-02-03 10:16:04,703 | INFO     | chi2: 1.6789072848680893
[2026-02-03 11:17:10] 2026-02-03 10:16:04,703 | INFO     | current chi2=1.6789072848680893 (change=2.266263050645066 %)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,703 | INFO     | left removable region: 30
[2026-02-03 11:17:10] 2026-02-03 10:16:04,704 | INFO     | sum of square deviations: 7799669962.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,710 | INFO     | sum of deviations: 14026758460.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,711 | INFO     | mean x: 1770104481.0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,715 | INFO     | mean y: 2551407.453924915
[2026-02-03 11:17:10] 2026-02-03 10:16:04,715 | INFO     | intersect: -3180766364.312923
[2026-02-03 11:17:10] 2026-02-03 10:16:04,716 | INFO     | chi2: 0.0023896682811920017
[2026-02-03 11:17:10] 2026-02-03 10:16:04,716 | INFO     | current memory leak: 1.80 B/s (using 293 data points, chi2=0.00)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | ..............................
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | . Timing measurements:
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | . get job = 0 s
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | . initial setup = 122 s
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | . payload setup = 152 s
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | . stage-in = 0 s
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | . payload execution = 20145 s
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | . stage-out = 3 s
[2026-02-03 11:17:10] 2026-02-03 10:16:04,717 | INFO     | . log creation = 1 s
[2026-02-03 11:17:10] 2026-02-03 10:16:04,718 | INFO     | ..............................
[2026-02-03 11:17:10] 2026-02-03 10:16:04,844 | INFO     | 
[2026-02-03 11:17:10] 2026-02-03 10:16:04,844 | INFO     | job summary report
[2026-02-03 11:17:10] 2026-02-03 10:16:04,844 | INFO     | --------------------------------------------------
[2026-02-03 11:17:10] 2026-02-03 10:16:04,844 | INFO     | PanDA job id: 6996985649
[2026-02-03 11:17:10] 2026-02-03 10:16:04,845 | INFO     | task id: 48431080
[2026-02-03 11:17:10] 2026-02-03 10:16:04,845 | INFO     | errors: (none)
[2026-02-03 11:17:10] 2026-02-03 10:16:04,845 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 11:17:10] 2026-02-03 10:16:04,845 | INFO     | pilot state: finished 
[2026-02-03 11:17:10] 2026-02-03 10:16:04,845 | INFO     | transexitcode: 0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,845 | INFO     | exeerrorcode: 0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,845 | INFO     | exeerrordiag: 
[2026-02-03 11:17:10] 2026-02-03 10:16:04,845 | INFO     | exitcode: 0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | exitmsg: OK
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | cpuconsumptiontime: 77046 s
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | nevents: 400
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | neventsw: 0
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | pid: 21010
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | pgrp: 21010
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | corecount: 8
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | event service: False
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | sizes: {0: 2277226, 1: 2278285, 2: 2278373, 12: 2278373, 20301: 2311804, 20302: 2311803, 20305: 2320987, 20308: 2321237}
[2026-02-03 11:17:10] 2026-02-03 10:16:04,846 | INFO     | --------------------------------------------------
[2026-02-03 11:17:10] 2026-02-03 10:16:04,847 | INFO     | 
[2026-02-03 11:17:10] 2026-02-03 10:16:04,847 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-02-03 11:17:10] 2026-02-03 10:16:05,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,280 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,280 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,280 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,282 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 11:17:10] 2026-02-03 10:16:05,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,282 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 11:17:10] 2026-02-03 10:16:05,282 | INFO     | job 6996985649 has completed (purged errors)
[2026-02-03 11:17:10] 2026-02-03 10:16:05,282 | INFO     | overall cleanup function is called
[2026-02-03 11:17:10] 2026-02-03 10:16:06,291 | INFO     | --- collectZombieJob: --- 10, [21010]
[2026-02-03 11:17:10] 2026-02-03 10:16:06,291 | INFO     | zombie collector waiting for pid 21010
[2026-02-03 11:17:10] 2026-02-03 10:16:06,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 11:17:10] 2026-02-03 10:16:06,291 | INFO     | collected zombie processes
[2026-02-03 11:17:10] 2026-02-03 10:16:06,292 | INFO     | will attempt to kill all subprocesses of pid=21010
[2026-02-03 11:17:10] 2026-02-03 10:16:06,368 | INFO     | process IDs to be killed: [21010] (in reverse order)
[2026-02-03 11:17:10] 2026-02-03 10:16:07,022 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 11:17:10] 2026-02-03 10:16:07,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 11:17:10] 2026-02-03 10:16:07,024 | INFO     | did not find any defunct processes belonging to 21010
[2026-02-03 11:17:10] 2026-02-03 10:16:07,026 | INFO     | did not find any defunct processes belonging to 21010
[2026-02-03 11:17:10] 2026-02-03 10:16:07,026 | INFO     | ready for new job
[2026-02-03 11:17:10] 2026-02-03 10:16:07,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 11:17:10] 2026-02-03 10:16:07,029 | INFO     | **************************************
[2026-02-03 11:17:10] 2026-02-03 10:16:07,029 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 11:17:10] 2026-02-03 10:16:07,029 | INFO     | **************************************
[2026-02-03 11:17:10] 2026-02-03 10:16:07,029 | INFO     | 
[2026-02-03 11:17:10] 2026-02-03 10:16:07,030 | INFO     | pilot is running in a VM
[2026-02-03 11:17:10] 2026-02-03 10:16:07,030 | INFO     | architecture information:
[2026-02-03 11:17:10] 2026-02-03 10:16:07,036 | INFO     | executing command: cat /etc/os-release
[2026-02-03 11:17:10] 2026-02-03 10:16:07,310 | INFO     | cat /etc/os-release:
[2026-02-03 11:17:10] NAME="CentOS Linux"
[2026-02-03 11:17:10] VERSION="7 (Core)"
[2026-02-03 11:17:10] ID="centos"
[2026-02-03 11:17:10] ID_LIKE="rhel fedora"
[2026-02-03 11:17:10] VERSION_ID="7"
[2026-02-03 11:17:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 11:17:10] ANSI_COLOR="0;31"
[2026-02-03 11:17:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 11:17:10] HOME_URL="https://www.centos.org/"
[2026-02-03 11:17:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 11:17:10] 
[2026-02-03 11:17:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 11:17:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 11:17:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 11:17:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 11:17:10] 
[2026-02-03 11:17:10] 2026-02-03 10:16:07,310 | INFO     | **************************************
[2026-02-03 11:17:10] 2026-02-03 10:16:07,813 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-02-03 11:17:10] 2026-02-03 10:16:08,067 | INFO     | sufficient remaining disk space (494389952512 B)
[2026-02-03 11:17:10] 2026-02-03 10:16:08,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 11:17:10] 2026-02-03 10:16:08,067 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 11:17:10] 2026-02-03 10:16:08,068 | INFO     | update_server=False
[2026-02-03 11:17:10] 2026-02-03 10:16:08,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 11:17:10] 2026-02-03 10:16:08,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 11:17:10] 2026-02-03 10:16:08,068 | INFO     | aborting loop
[2026-02-03 11:17:10] 2026-02-03 10:16:08,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 11:17:10] 2026-02-03 10:16:08,907 | INFO     | all data control threads have been joined
[2026-02-03 11:17:10] 2026-02-03 10:16:09,074 | INFO     | [job] retrieve thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:09,075 | INFO     | [job] job monitor thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:09,112 | INFO     | all payload control threads have been joined
[2026-02-03 11:17:10] 2026-02-03 10:16:09,332 | INFO     | [job] validate thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:09,506 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:09,510 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:09,684 | INFO     | all job control threads have been joined
[2026-02-03 11:17:10] 2026-02-03 10:16:09,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 11:17:10] 2026-02-03 10:16:09,906 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:09,913 | INFO     | [data] control thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:09,914 | INFO     | [payload] failed_post thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:10,079 | INFO     | [data] copytool_out thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:10,096 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:10,119 | INFO     | [payload] control thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:10,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 11:17:10] 2026-02-03 10:16:10,391 | INFO     | [data] copytool_in thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:10,403 | INFO     | [payload] validate_post thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:10,690 | INFO     | [job] control thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:10,864 | INFO     | [job] queue monitor thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:14,332 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 11:17:10] 2026-02-03 10:16:37,351 | INFO     | PID=16535 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 11:17:10] 2026-02-03 10:16:37,351 | INFO     | .. there are 2 such processes running
[2026-02-03 11:17:10] 2026-02-03 10:16:37,352 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 11:17:10] 2026-02-03 10:16:37,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 11:17:10] 2026-02-03 10:16:37,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 11:17:10] 2026-02-03 10:16:58,821 | INFO     | [monitor] cgroup control has ended
[2026-02-03 11:17:10] 2026-02-03 10:16:59,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014656755520)>', '<ExcThread(monitor, started 140014356772608)>']
[2026-02-03 11:17:10] 2026-02-03 10:17:00,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 11:17:10] 2026-02-03 10:17:00,490 | INFO     | [monitor] control thread has ended
[2026-02-03 11:17:10] 2026-02-03 10:17:04,800 | INFO     | all workflow threads have been joined
[2026-02-03 11:17:10] 2026-02-03 10:17:04,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 11:17:10] 2026-02-03 10:17:04,800 | INFO     | traces error code: 0
[2026-02-03 11:17:10] 2026-02-03 10:17:04,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 11:17:10] 2026-02-03 10:17:05,240 [wrapper] ==== pilot stdout END ====
[2026-02-03 11:17:10] 2026-02-03 10:17:05,353 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 11:17:10] 2026-02-03 10:17:05,473 [wrapper] pilotpid: 16535
[2026-02-03 11:17:10] 2026-02-03 10:17:05,602 [wrapper] Pilot exit status: 0
[2026-02-03 11:17:10] 2026-02-03 10:17:05,780 [wrapper] pandaids: 6996985649
[2026-02-03 11:17:10] 2026-02-03 10:17:06,863 [wrapper] cleanup supervisor_pilot 27776 16536
[2026-02-03 11:17:10] 2026-02-03 10:17:07,004 [wrapper] Test setup, not cleaning
[2026-02-03 11:17:10] 2026-02-03 10:17:07,111 [wrapper] apfmon messages muted
[2026-02-03 11:17:10] 2026-02-03 10:17:07,185 [wrapper] ==== wrapper stdout END ====
[2026-02-03 11:17:10] 2026-02-03 10:17:07,267 [wrapper] ==== wrapper stderr END ====
[2026-02-03 11:17:10]  *** Error codes and diagnostics ***
[2026-02-03 11:17:10]     "exeErrorCode": 0,
[2026-02-03 11:17:10]     "exeErrorDiag": "",
[2026-02-03 11:17:10]     "pilotErrorCode": 0,
[2026-02-03 11:17:10]     "pilotErrorDiag": "",
[2026-02-03 11:17:10]  *** Listing of results directory ***
[2026-02-03 11:17:10] total 888364
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc    584422 Feb  2 14:12 pilot3.tar.gz
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc      5111 Feb  2 14:12 queuedata.json
[2026-02-03 11:17:10] -rwx------. 1 boinc boinc     36322 Feb  2 14:12 runpilot2-wrapper.sh
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc       100 Feb  3 05:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 11:17:10] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 05:30 run_atlas
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc       105 Feb  3 05:30 job.xml
[2026-02-03 11:17:10] -rw-r--r--. 2 boinc boinc 644652473 Feb  3 05:30 EVNT.48431078._000133.pool.root.1
[2026-02-03 11:17:10] -rw-r--r--. 2 boinc boinc     15845 Feb  3 05:30 start_atlas.sh
[2026-02-03 11:17:10] drwxrwx--x. 2 boinc boinc        68 Feb  3 05:30 shared
[2026-02-03 11:17:10] -rw-r--r--. 2 boinc boinc    597762 Feb  3 05:30 input.tar.gz
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc      6391 Feb  3 05:30 init_data.xml
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc         0 Feb  3 05:30 boinc_lockfile
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc      2558 Feb  3 05:30 pandaJob.out
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc       415 Feb  3 05:37 workernode_map.json
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc   1009324 Feb  3 05:37 agis_schedconf.cvmfs.json
[2026-02-03 11:17:10] drwx------. 5 boinc boinc      4096 Feb  3 05:37 pilot3
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc 254245934 Feb  3 11:14 HITS.48431080._006954.pool.root.1
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc       532 Feb  3 11:14 boinc_task_state.xml
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc      1010 Feb  3 11:15 memory_monitor_summary.json
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc   1511668 Feb  3 11:15 agis_ddmendpoints.agis.ALL.json
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc    568773 Feb  3 11:16 log.48431080._006954.job.log.tgz.1
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc      6316 Feb  3 11:16 heartbeat.json
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc        95 Feb  3 11:16 pilot_heartbeat.json
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc        28 Feb  3 11:17 wrapper_checkpoint.txt
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc      4881 Feb  3 11:17 pilotlog.txt
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc   2860607 Feb  3 11:17 log.48431080._006954.job.log.1
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc       357 Feb  3 11:17 output.list
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc       620 Feb  3 11:17 runtime_log
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc   3450880 Feb  3 11:17 result.tar.gz
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc      8832 Feb  3 11:17 runtime_log.err
[2026-02-03 11:17:10] -rw-------. 1 boinc boinc       656 Feb  3 11:17 AudKDmZu868n9Rq4apOajLDm4fhM0noT9bVooX4SDmFOSKDmbti2Dm.diag
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc      8192 Feb  3 11:17 boinc_mmap_file
[2026-02-03 11:17:10] -rw-r--r--. 1 boinc boinc     20710 Feb  3 11:17 stderr.txt
[2026-02-03 11:17:10] HITS file was successfully produced:
[2026-02-03 11:17:11] -rw-------. 1 boinc boinc 254245934 Feb  3 11:14 shared/HITS.pool.root.1
[2026-02-03 11:17:11]  *** Contents of shared directory: ***
[2026-02-03 11:17:11] total 881804
[2026-02-03 11:17:11] -rw-r--r--. 2 boinc boinc 644652473 Feb  3 05:30 ATLAS.root_0
[2026-02-03 11:17:11] -rw-r--r--. 2 boinc boinc     15845 Feb  3 05:30 start_atlas.sh
[2026-02-03 11:17:11] -rw-r--r--. 2 boinc boinc    597762 Feb  3 05:30 input.tar.gz
[2026-02-03 11:17:11] -rw-------. 1 boinc boinc 254245934 Feb  3 11:14 HITS.pool.root.1
[2026-02-03 11:17:11] -rw-------. 1 boinc boinc   3450880 Feb  3 11:17 result.tar.gz
11:17:12 (12560): run_atlas exited; CPU time 77266.355147
11:17:12 (12560): called boinc_finish(0)

</stderr_txt>
]]>

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