Name bEOLDmAv868n9Rq4apOajLDm4fhM0noT9bVooX4SDmlTSKDmZP854n_1
Workunit 238879315
Created 2 Feb 2026, 18:14:57 UTC
Sent 2 Feb 2026, 18:19:13 UTC
Report deadline 10 Feb 2026, 18:19:13 UTC
Received 4 Feb 2026, 6:25:44 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10627309
Run time 5 hours 46 min 58 sec
CPU time 11 hours 34 min 33 sec
Priority 28
Validate state Valid
Credit 347.66
Device peak FLOPS 43.67 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.42 GB
Peak swap size 2.73 GB
Peak disk usage 1.10 GB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
23:37:49 (3415691): wrapper (7.7.26015): starting
23:37:49 (3415691): wrapper: running run_atlas (--nthreads 2)
[2026-02-03 23:37:49] Arguments: --nthreads 2
[2026-02-03 23:37:49] Threads: 2
[2026-02-03 23:37:49] Checking for CVMFS
[2026-02-03 23:37:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 23:37:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 23:37:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 23:37:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 23:37:53] 2.13.3.0 2818728 1699 60544 155846 2 50 3282494 6144000 2736 130560 0 747306 99.980 74248 1787 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.1.1:3128 1
[2026-02-03 23:37:53] CVMFS is ok
[2026-02-03 23:37:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 23:37:53] Checking for apptainer binary...
[2026-02-03 23:37:53] apptainer is not installed, using version from CVMFS
[2026-02-03 23:37:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 23:37:53] pitot
[2026-02-03 23:37:53] apptainer works
[2026-02-03 23:37:53] Set ATHENA_PROC_NUMBER=2
[2026-02-03 23:37:53] Set ATHENA_CORE_NUMBER=2
[2026-02-03 23:37:53] Starting ATLAS job with PandaID=6993187973
[2026-02-03 23:37:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 05:24:43]  *** The last 200 lines of the pilot log: ***
[2026-02-04 05:24:43] 2026-02-04 04:23:49,186 | INFO     | job 6993187973 has state=finished
[2026-02-04 05:24:43] 2026-02-04 04:23:49,186 | INFO     | preparing for final server update for job 6993187973 in state='finished'
[2026-02-04 05:24:43] 2026-02-04 04:23:49,186 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-6993187973/jobReport.json
[2026-02-04 05:24:43] 2026-02-04 04:23:49,188 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-02-04 05:24:43] 2026-02-04 04:23:49,188 | INFO     | this job has now completed (state=finished)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,188 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,189 | INFO     | log transfer has been attempted: DONE
[2026-02-04 05:24:43] 2026-02-04 04:23:49,189 | INFO     | job 6993187973 has finished - writing final server update
[2026-02-04 05:24:43] 2026-02-04 04:23:49,189 | INFO     | total number of processed events: 400 (read)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,191 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6993187973/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,191 | INFO     | extracted standard info from prmon json
[2026-02-04 05:24:43] 2026-02-04 04:23:49,191 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 05:24:43] 2026-02-04 04:23:49,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 05:24:43] 2026-02-04 04:23:49,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 05:24:43] 2026-02-04 04:23:49,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 05:24:43] 2026-02-04 04:23:49,196 | INFO     | fitting pss+swap vs Time
[2026-02-04 05:24:43] 2026-02-04 04:23:49,197 | INFO     | sum of square deviations: 12187409905.0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,199 | INFO     | sum of deviations: -73845002562.5
[2026-02-04 05:24:43] 2026-02-04 04:23:49,199 | INFO     | mean x: 1770168644.5
[2026-02-04 05:24:43] 2026-02-04 04:23:49,199 | INFO     | mean y: 2291477.1029411764
[2026-02-04 05:24:43] 2026-02-04 04:23:49,199 | INFO     | intersect: 10727959121.672056
[2026-02-04 05:24:43] 2026-02-04 04:23:49,200 | INFO     | chi2: 1.6271159292167658
[2026-02-04 05:24:43] 2026-02-04 04:23:49,200 | INFO     | sum of square deviations: 11657595320.0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,202 | INFO     | sum of deviations: -72776557459.00002
[2026-02-04 05:24:43] 2026-02-04 04:23:49,203 | INFO     | mean x: 1770168492.0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,203 | INFO     | mean y: 2291784.6537313433
[2026-02-04 05:24:43] 2026-02-04 04:23:49,203 | INFO     | intersect: 11053178818.71741
[2026-02-04 05:24:43] 2026-02-04 04:23:49,203 | INFO     | chi2: 1.6239229254723782
[2026-02-04 05:24:43] 2026-02-04 04:23:49,203 | INFO     | current chi2=1.6239229254723782 (change=0.19623701587905204 %)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,203 | INFO     | right removable region: 334
[2026-02-04 05:24:43] 2026-02-04 04:23:49,204 | INFO     | sum of square deviations: 11657595320.0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,206 | INFO     | sum of deviations: -93044119230.0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,206 | INFO     | mean x: 1770168797.0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,206 | INFO     | mean y: 2296904.0029850747
[2026-02-04 05:24:43] 2026-02-04 04:23:49,206 | INFO     | intersect: 14130750678.918692
[2026-02-04 05:24:43] 2026-02-04 04:23:49,206 | INFO     | chi2: 0.5786381791042707
[2026-02-04 05:24:43] 2026-02-04 04:23:49,207 | INFO     | current chi2=0.5786381791042707 (change=64.43780257361219 %)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,207 | INFO     | sum of square deviations: 11143362422.5
[2026-02-04 05:24:43] 2026-02-04 04:23:49,209 | INFO     | sum of deviations: -75654581592.5
[2026-02-04 05:24:43] 2026-02-04 04:23:49,209 | INFO     | mean x: 1770168949.5
[2026-02-04 05:24:43] 2026-02-04 04:23:49,209 | INFO     | mean y: 2291746.172727273
[2026-02-04 05:24:43] 2026-02-04 04:23:49,209 | INFO     | intersect: 12020333172.524601
[2026-02-04 05:24:43] 2026-02-04 04:23:49,210 | INFO     | chi2: 0.5192777735787685
[2026-02-04 05:24:43] 2026-02-04 04:23:49,210 | INFO     | current chi2=0.5192777735787685 (change=10.258639624746486 %)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,210 | INFO     | left removable region: 20
[2026-02-04 05:24:43] 2026-02-04 04:23:49,210 | INFO     | sum of square deviations: 9599817202.5
[2026-02-04 05:24:43] 2026-02-04 04:23:49,212 | INFO     | sum of deviations: -39629905593.50001
[2026-02-04 05:24:43] 2026-02-04 04:23:49,212 | INFO     | mean x: 1770169071.5
[2026-02-04 05:24:43] 2026-02-04 04:23:49,212 | INFO     | mean y: 2280927.2070063693
[2026-02-04 05:24:43] 2026-02-04 04:23:49,213 | INFO     | intersect: 7309881864.630019
[2026-02-04 05:24:43] 2026-02-04 04:23:49,213 | INFO     | chi2: 0.3593643743249885
[2026-02-04 05:24:43] 2026-02-04 04:23:49,213 | INFO     | current memory leak: -4.13 B/s (using 314 data points, chi2=0.36)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,213 | INFO     | could have reported an average CPU frequency of 2728 MHz (15 samples)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,213 | INFO     | ..............................
[2026-02-04 05:24:43] 2026-02-04 04:23:49,213 | INFO     | . Timing measurements:
[2026-02-04 05:24:43] 2026-02-04 04:23:49,214 | INFO     | . get job = 0 s
[2026-02-04 05:24:43] 2026-02-04 04:23:49,214 | INFO     | . initial setup = 4 s
[2026-02-04 05:24:43] 2026-02-04 04:23:49,214 | INFO     | . payload setup = 4 s
[2026-02-04 05:24:43] 2026-02-04 04:23:49,214 | INFO     | . stage-in = 0 s
[2026-02-04 05:24:43] 2026-02-04 04:23:49,214 | INFO     | . payload execution = 20718 s
[2026-02-04 05:24:43] 2026-02-04 04:23:49,214 | INFO     | . stage-out = 0 s
[2026-02-04 05:24:43] 2026-02-04 04:23:49,214 | INFO     | . log creation = 0 s
[2026-02-04 05:24:43] 2026-02-04 04:23:49,214 | INFO     | ..............................
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | 
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | job summary report
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | --------------------------------------------------
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | PanDA job id: 6993187973
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | task id: 48442031
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | errors: (none)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | pilot state: finished 
[2026-02-04 05:24:43] 2026-02-04 04:23:49,430 | INFO     | transexitcode: 0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | exeerrorcode: 0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | exeerrordiag: 
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | exitcode: 0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | exitmsg: OK
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | cpuconsumptiontime: 41159 s
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | nevents: 400
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | neventsw: 0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | pid: 3424362
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | pgrp: 3424362
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | corecount: 2
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | event service: False
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | sizes: {0: 2278232, 11: 2278232, 20726: 2312045, 20728: 2321057, 20729: 2321113, 20731: 2321307}
[2026-02-04 05:24:43] 2026-02-04 04:23:49,431 | INFO     | --------------------------------------------------
[2026-02-04 05:24:43] 2026-02-04 04:23:49,432 | INFO     | 
[2026-02-04 05:24:43] 2026-02-04 04:23:49,432 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-02-04 05:24:43] 2026-02-04 04:23:49,444 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,446 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 05:24:43] 2026-02-04 04:23:49,447 | INFO     | job 6993187973 has completed (purged errors)
[2026-02-04 05:24:43] 2026-02-04 04:23:49,447 | INFO     | overall cleanup function is called
[2026-02-04 05:24:43] 2026-02-04 04:23:50,450 | INFO     | --- collectZombieJob: --- 10, [3424362]
[2026-02-04 05:24:43] 2026-02-04 04:23:50,451 | INFO     | zombie collector waiting for pid 3424362
[2026-02-04 05:24:43] 2026-02-04 04:23:50,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 05:24:43] 2026-02-04 04:23:50,451 | INFO     | collected zombie processes
[2026-02-04 05:24:43] 2026-02-04 04:23:50,451 | INFO     | will attempt to kill all subprocesses of pid=3424362
[2026-02-04 05:24:43] 2026-02-04 04:23:50,555 | INFO     | process IDs to be killed: [3424362] (in reverse order)
[2026-02-04 05:24:43] 2026-02-04 04:23:50,589 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 05:24:43] 2026-02-04 04:23:50,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 05:24:43] 2026-02-04 04:23:50,592 | INFO     | did not find any defunct processes belonging to 3424362
[2026-02-04 05:24:43] 2026-02-04 04:23:50,594 | INFO     | did not find any defunct processes belonging to 3424362
[2026-02-04 05:24:43] 2026-02-04 04:23:50,595 | INFO     | ready for new job
[2026-02-04 05:24:43] 2026-02-04 04:23:50,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 05:24:43] 2026-02-04 04:23:50,596 | INFO     | **************************************
[2026-02-04 05:24:43] 2026-02-04 04:23:50,596 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 05:24:43] 2026-02-04 04:23:50,596 | INFO     | **************************************
[2026-02-04 05:24:43] 2026-02-04 04:23:50,597 | INFO     | 
[2026-02-04 05:24:43] 2026-02-04 04:23:50,597 | INFO     | architecture information:
[2026-02-04 05:24:43] 2026-02-04 04:23:50,597 | INFO     | executing command: cat /etc/os-release
[2026-02-04 05:24:43] 2026-02-04 04:23:50,605 | INFO     | cat /etc/os-release:
[2026-02-04 05:24:43] NAME="CentOS Linux"
[2026-02-04 05:24:43] VERSION="7 (Core)"
[2026-02-04 05:24:43] ID="centos"
[2026-02-04 05:24:43] ID_LIKE="rhel fedora"
[2026-02-04 05:24:43] VERSION_ID="7"
[2026-02-04 05:24:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 05:24:43] ANSI_COLOR="0;31"
[2026-02-04 05:24:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 05:24:43] HOME_URL="https://www.centos.org/"
[2026-02-04 05:24:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 05:24:43] 
[2026-02-04 05:24:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 05:24:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 05:24:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 05:24:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 05:24:43] 
[2026-02-04 05:24:43] 2026-02-04 04:23:50,605 | INFO     | **************************************
[2026-02-04 05:24:43] 2026-02-04 04:23:51,107 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-02-04 05:24:43] 2026-02-04 04:23:51,117 | INFO     | sufficient remaining disk space (29064429568 B)
[2026-02-04 05:24:43] 2026-02-04 04:23:51,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 05:24:43] 2026-02-04 04:23:51,117 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 05:24:43] 2026-02-04 04:23:51,117 | INFO     | update_server=False
[2026-02-04 05:24:43] 2026-02-04 04:23:51,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 05:24:43] 2026-02-04 04:23:51,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 05:24:43] 2026-02-04 04:23:51,123 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 05:24:43] 2026-02-04 04:23:51,123 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 05:24:43] 2026-02-04 04:23:51,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 05:24:43] 2026-02-04 04:23:51,123 | INFO     | will abort loop
[2026-02-04 05:24:43] 2026-02-04 04:23:51,179 | INFO     | all payload control threads have been joined
[2026-02-04 05:24:43] 2026-02-04 04:23:51,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 05:24:43] 2026-02-04 04:23:51,620 | INFO     | all data control threads have been joined
[2026-02-04 05:24:43] 2026-02-04 04:23:51,647 | INFO     | all job control threads have been joined
[2026-02-04 05:24:43] 2026-02-04 04:23:52,123 | INFO     | [job] retrieve thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:52,123 | INFO     | [job] queue monitor thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:52,128 | INFO     | [job] job monitor thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:52,183 | INFO     | [payload] control thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:52,307 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:52,625 | INFO     | [data] control thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:52,651 | INFO     | [job] control thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:52,863 | INFO     | [data] copytool_in thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:52,872 | INFO     | [payload] validate_post thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:53,081 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:53,129 | INFO     | [payload] failed_post thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:53,272 | INFO     | [data] copytool_out thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:53,286 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:53,371 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:53,399 | INFO     | [job] validate thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:23:53,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 05:24:43] 2026-02-04 04:23:57,416 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 05:24:43] 2026-02-04 04:24:21,450 | INFO     | PID=3419859 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 05:24:43] 2026-02-04 04:24:21,450 | INFO     | .. there are 2 such processes running
[2026-02-04 05:24:43] 2026-02-04 04:24:21,451 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 05:24:43] 2026-02-04 04:24:21,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 05:24:43] 2026-02-04 04:24:21,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 05:24:43] 2026-02-04 04:24:37,515 | INFO     | [monitor] cgroup control has ended
[2026-02-04 05:24:43] 2026-02-04 04:24:38,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514301564736)>', '<ExcThread(monitor, started 140513537681152)>']
[2026-02-04 05:24:43] 2026-02-04 04:24:38,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 05:24:43] 2026-02-04 04:24:38,532 | INFO     | [monitor] control thread has ended
[2026-02-04 05:24:43] 2026-02-04 04:24:43,410 | INFO     | all workflow threads have been joined
[2026-02-04 05:24:43] 2026-02-04 04:24:43,410 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 05:24:43] 2026-02-04 04:24:43,410 | INFO     | traces error code: 0
[2026-02-04 05:24:43] 2026-02-04 04:24:43,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 05:24:43] 2026-02-04 04:24:43,473 [wrapper] ==== pilot stdout END ====
[2026-02-04 05:24:43] 2026-02-04 04:24:43,475 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 05:24:43] 2026-02-04 04:24:43,477 [wrapper] pilotpid: 3419859
[2026-02-04 05:24:43] 2026-02-04 04:24:43,479 [wrapper] Pilot exit status: 0
[2026-02-04 05:24:43] 2026-02-04 04:24:43,485 [wrapper] pandaids: 6993187973
[2026-02-04 05:24:43] 2026-02-04 04:24:43,507 [wrapper] cleanup supervisor_pilot 3504845 3419860
[2026-02-04 05:24:43] 2026-02-04 04:24:43,508 [wrapper] Test setup, not cleaning
[2026-02-04 05:24:43] 2026-02-04 04:24:43,510 [wrapper] apfmon messages muted
[2026-02-04 05:24:43] 2026-02-04 04:24:43,512 [wrapper] ==== wrapper stdout END ====
[2026-02-04 05:24:43] 2026-02-04 04:24:43,514 [wrapper] ==== wrapper stderr END ====
[2026-02-04 05:24:43]  *** Error codes and diagnostics ***
[2026-02-04 05:24:43]     "exeErrorCode": 0,
[2026-02-04 05:24:43]     "exeErrorDiag": "",
[2026-02-04 05:24:43]     "pilotErrorCode": 0,
[2026-02-04 05:24:43]     "pilotErrorDiag": "",
[2026-02-04 05:24:43]  *** Listing of results directory ***
[2026-02-04 05:24:43] total 675436
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc    584422  2 f&#195;&#169;vr. 14:12 pilot3.tar.gz
[2026-02-04 05:24:43] -rwx------ 1 boinc boinc     36322  2 f&#195;&#169;vr. 14:13 runpilot2-wrapper.sh
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc      5111  2 f&#195;&#169;vr. 14:15 queuedata.json
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc       100  3 f&#195;&#169;vr. 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 05:24:43] -rwxr-xr-x 1 boinc boinc      7986  3 f&#195;&#169;vr. 23:37 run_atlas
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc       105  3 f&#195;&#169;vr. 23:37 job.xml
[2026-02-04 05:24:43] -rw-r--r-- 2 boinc boinc     15845  3 f&#195;&#169;vr. 23:37 start_atlas.sh
[2026-02-04 05:24:43] drwxrwx--x 2 boinc boinc      4096  3 f&#195;&#169;vr. 23:37 shared
[2026-02-04 05:24:43] -rw-r--r-- 2 boinc boinc    597759  3 f&#195;&#169;vr. 23:37 input.tar.gz
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc      6356  3 f&#195;&#169;vr. 23:37 init_data.xml
[2026-02-04 05:24:43] -rw-r--r-- 2 boinc boinc 494520509  3 f&#195;&#169;vr. 23:37 EVNT.48442027._000022.pool.root.1
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc         0  3 f&#195;&#169;vr. 23:37 boinc_lockfile
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc      2527  3 f&#195;&#169;vr. 23:37 pandaJob.out
[2026-02-04 05:24:43] -rw------- 1 boinc boinc        52  3 f&#195;&#169;vr. 23:37 setup.sh.local
[2026-02-04 05:24:43] -rw------- 1 boinc boinc   1009244  3 f&#195;&#169;vr. 23:38 agis_schedconf.cvmfs.json
[2026-02-04 05:24:43] -rw------- 1 boinc boinc       417  3 f&#195;&#169;vr. 23:38 workernode_map.json
[2026-02-04 05:24:43] drwx------ 5 boinc boinc      4096  3 f&#195;&#169;vr. 23:38 pilot3
[2026-02-04 05:24:43] -rw------- 1 boinc boinc 186330429  4 f&#195;&#169;vr. 05:23 HITS.48442031._001062.pool.root.1
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc       531  4 f&#195;&#169;vr. 05:23 boinc_task_state.xml
[2026-02-04 05:24:43] -rw------- 1 boinc boinc      1024  4 f&#195;&#169;vr. 05:23 memory_monitor_summary.json
[2026-02-04 05:24:43] -rw------- 1 boinc boinc   1511668  4 f&#195;&#169;vr. 05:23 agis_ddmendpoints.agis.ALL.json
[2026-02-04 05:24:43] -rw------- 1 boinc boinc    462267  4 f&#195;&#169;vr. 05:23 log.48442031._001062.job.log.tgz.1
[2026-02-04 05:24:43] -rw------- 1 boinc boinc      6292  4 f&#195;&#169;vr. 05:23 heartbeat.json
[2026-02-04 05:24:43] -rw------- 1 boinc boinc        95  4 f&#195;&#169;vr. 05:24 pilot_heartbeat.json
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc      8192  4 f&#195;&#169;vr. 05:24 boinc_mmap_file
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc        28  4 f&#195;&#169;vr. 05:24 wrapper_checkpoint.txt
[2026-02-04 05:24:43] -rw------- 1 boinc boinc      5012  4 f&#195;&#169;vr. 05:24 pilotlog.txt
[2026-02-04 05:24:43] -rw------- 1 boinc boinc   2960150  4 f&#195;&#169;vr. 05:24 log.48442031._001062.job.log.1
[2026-02-04 05:24:43] -rw------- 1 boinc boinc       357  4 f&#195;&#169;vr. 05:24 output.list
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc       620  4 f&#195;&#169;vr. 05:24 runtime_log
[2026-02-04 05:24:43] -rw------- 1 boinc boinc   3440640  4 f&#195;&#169;vr. 05:24 result.tar.gz
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc      9413  4 f&#195;&#169;vr. 05:24 runtime_log.err
[2026-02-04 05:24:43] -rw------- 1 boinc boinc       646  4 f&#195;&#169;vr. 05:24 bEOLDmAv868n9Rq4apOajLDm4fhM0noT9bVooX4SDmlTSKDmZP854n.diag
[2026-02-04 05:24:43] -rw-r--r-- 1 boinc boinc     20974  4 f&#195;&#169;vr. 05:24 stderr.txt
[2026-02-04 05:24:43] HITS file was successfully produced:
[2026-02-04 05:24:43] -rw------- 1 boinc boinc 186330429  4 f&#195;&#169;vr. 05:23 shared/HITS.pool.root.1
[2026-02-04 05:24:43]  *** Contents of shared directory: ***
[2026-02-04 05:24:43] total 668868
[2026-02-04 05:24:43] -rw-r--r-- 2 boinc boinc     15845  3 f&#195;&#169;vr. 23:37 start_atlas.sh
[2026-02-04 05:24:43] -rw-r--r-- 2 boinc boinc    597759  3 f&#195;&#169;vr. 23:37 input.tar.gz
[2026-02-04 05:24:43] -rw-r--r-- 2 boinc boinc 494520509  3 f&#195;&#169;vr. 23:37 ATLAS.root_0
[2026-02-04 05:24:43] -rw------- 1 boinc boinc 186330429  4 f&#195;&#169;vr. 05:23 HITS.pool.root.1
[2026-02-04 05:24:43] -rw------- 1 boinc boinc   3440640  4 f&#195;&#169;vr. 05:24 result.tar.gz
05:24:45 (3415691): run_atlas exited; CPU time 41516.891710
05:24:45 (3415691): called boinc_finish(0)

</stderr_txt>
]]>


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