Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
19:15:50 (354531): wrapper (7.7.26015): starting
19:15:50 (354531): wrapper: running run_atlas (--nthreads 2)
[2026-02-02 19:15:50] Arguments: --nthreads 2
[2026-02-02 19:15:50] Threads: 2
[2026-02-02 19:15:50] Checking for CVMFS
[2026-02-02 19:15:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 19:15:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 19:15:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 19:15:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 19:15:55] 2.13.3.0 354794 0 25320 155796 3 1 4587213 6144000 0 130560 0 0 0.000 1336 536 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-02 19:15:55] CVMFS is ok
[2026-02-02 19:15:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 19:15:55] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-02 19:15:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-02 19:15:55] Further information can be found at the LHC@home message board.
[2026-02-02 19:15:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 19:15:55] Checking for apptainer binary...
[2026-02-02 19:15:55] apptainer is not installed, using version from CVMFS
[2026-02-02 19:15:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 19:15:58] apptainer isnt working: ERROR  : Could not write info to setgroups: Permission denied
[2026-02-02 19:15:58] ERROR  : Error while waiting event for user namespace mappings: no event received
[2026-02-02 19:15:58] 
[2026-02-02 19:15:58] Falling back to singularity found in PATH at /usr/local/bin/singularity
[2026-02-02 19:15:58] WARNING: singularity support will be removed in a future version of native ATLAS
[2026-02-02 19:15:58] Please install apptainer instead following the instructions at https://apptainer.org/docs/admin/main/installation.html
[2026-02-02 19:15:58] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 19:15:58] singularity works
[2026-02-02 19:15:58] Set ATHENA_PROC_NUMBER=2
[2026-02-02 19:15:58] Set ATHENA_CORE_NUMBER=2
[2026-02-02 19:15:58] Starting ATLAS job with PandaID=6993188861
[2026-02-02 19:15:58] Running command: /usr/local/bin/singularity exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 22:42:14]  *** The last 200 lines of the pilot log: ***
[2026-02-02 22:42:14] 2026-02-02 21:41:31,185 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 22:42:14] 2026-02-02 21:41:31,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 22:42:14] 2026-02-02 21:41:31,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 22:42:14] 2026-02-02 21:41:31,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 22:42:14] 2026-02-02 21:41:31,186 | INFO     | fitting pss+swap vs Time
[2026-02-02 22:42:14] 2026-02-02 21:41:31,186 | INFO     | sum of square deviations: 2518000700.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | sum of deviations: 22873897486.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | mean x: 1770062328.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | mean y: 2255638.6915422888
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | intersect: -16077257061.405209
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | chi2: 1.3265602045932192
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | sum of square deviations: 2334722845.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | sum of deviations: 21807383947.500004
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | mean x: 1770062175.5
[2026-02-02 22:42:14] 2026-02-02 21:41:31,187 | INFO     | mean y: 2254751.3214285714
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | intersect: -16530939137.084473
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | chi2: 1.3273378544050491
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | current chi2=1.3273378544050491 (change=-0.05862152423518457 %)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | right removable region: 195
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | sum of square deviations: 2334722845.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | sum of deviations: 3039133917.5000005
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | mean x: 1770062480.5
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | mean y: 2271836.964285714
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | intersect: -2301837591.742543
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | chi2: 0.03808882999423512
[2026-02-02 22:42:14] 2026-02-02 21:41:31,188 | INFO     | current chi2=0.03808882999423512 (change=97.1287522524532 %)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,189 | INFO     | sum of square deviations: 2160561440.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,189 | INFO     | sum of deviations: 7662531775.000001
[2026-02-02 22:42:14] 2026-02-02 21:41:31,189 | INFO     | mean x: 1770062633.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,189 | INFO     | mean y: 2267785.052356021
[2026-02-02 22:42:14] 2026-02-02 21:41:31,189 | INFO     | intersect: -6275341783.459922
[2026-02-02 22:42:14] 2026-02-02 21:41:31,189 | INFO     | chi2: 0.009647977995410605
[2026-02-02 22:42:14] 2026-02-02 21:41:31,189 | INFO     | current chi2=0.009647977995410605 (change=74.66979690142527 %)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,189 | INFO     | sum of square deviations: 1995283922.5
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | sum of deviations: 8081493317.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | mean x: 1770062785.5
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | mean y: 2267419.5483870967
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | intersect: -7167013308.061272
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | chi2: 0.0017611094455420007
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | current chi2=0.0017611094455420007 (change=81.74633642013141 %)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | sum of square deviations: 1838657730.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | sum of deviations: 7284545763.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | mean x: 1770062938.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | mean y: 2268193.5359116024
[2026-02-02 22:42:14] 2026-02-02 21:41:31,190 | INFO     | intersect: -7010513067.961427
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | chi2: 0.001685181254580997
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | current chi2=0.001685181254580997 (change=4.31138400587228 %)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | left removable region: 40
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | sum of square deviations: 1154663510.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | sum of deviations: 4782776736.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | mean x: 1770063365.0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | mean y: 2269551.8258064515
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | intersect: -7329578913.159352
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | chi2: 0.0015952802596615478
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | current memory leak: 4.14 B/s (using 155 data points, chi2=0.00)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | could have reported an average CPU frequency of 4221 MHz (10 samples)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | ..............................
[2026-02-02 22:42:14] 2026-02-02 21:41:31,191 | INFO     | . Timing measurements:
[2026-02-02 22:42:14] 2026-02-02 21:41:31,192 | INFO     | . get job = 0 s
[2026-02-02 22:42:14] 2026-02-02 21:41:31,192 | INFO     | . initial setup = 3 s
[2026-02-02 22:42:14] 2026-02-02 21:41:31,192 | INFO     | . payload setup = 4 s
[2026-02-02 22:42:14] 2026-02-02 21:41:31,192 | INFO     | . stage-in = 0 s
[2026-02-02 22:42:14] 2026-02-02 21:41:31,192 | INFO     | . payload execution = 12258 s
[2026-02-02 22:42:14] 2026-02-02 21:41:31,192 | INFO     | . stage-out = 0 s
[2026-02-02 22:42:14] 2026-02-02 21:41:31,192 | INFO     | . log creation = 0 s
[2026-02-02 22:42:14] 2026-02-02 21:41:31,192 | INFO     | ..............................
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | 
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | job summary report
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | --------------------------------------------------
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | PanDA job id: 6993188861
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | task id: 48431113
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | errors: (none)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | pilot state: finished 
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | transexitcode: 0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | exeerrorcode: 0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | exeerrordiag: 
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | exitcode: 0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | exitmsg: OK
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | cpuconsumptiontime: 24232 s
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | nevents: 400
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | neventsw: 0
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | pid: 372156
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | pgrp: 372156
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | corecount: 2
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | event service: False
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | sizes: {0: 2278101, 1: 2278307, 11: 2278335, 12267: 2308173, 12268: 2317185, 12270: 2317241, 12271: 2317563}
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | --------------------------------------------------
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | 
[2026-02-02 22:42:14] 2026-02-02 21:41:31,220 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 22:42:14] 2026-02-02 21:41:31,229 | INFO     | job 6993188861 has completed (purged errors)
[2026-02-02 22:42:14] 2026-02-02 21:41:31,230 | INFO     | overall cleanup function is called
[2026-02-02 22:42:14] 2026-02-02 21:41:32,236 | INFO     | --- collectZombieJob: --- 10, [372156]
[2026-02-02 22:42:14] 2026-02-02 21:41:32,236 | INFO     | zombie collector waiting for pid 372156
[2026-02-02 22:42:14] 2026-02-02 21:41:32,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 22:42:14] 2026-02-02 21:41:32,236 | INFO     | collected zombie processes
[2026-02-02 22:42:14] 2026-02-02 21:41:32,236 | INFO     | will attempt to kill all subprocesses of pid=372156
[2026-02-02 22:42:14] 2026-02-02 21:41:32,318 | INFO     | process IDs to be killed: [372156] (in reverse order)
[2026-02-02 22:42:14] 2026-02-02 21:41:32,337 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 22:42:14] 2026-02-02 21:41:32,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 22:42:14] 2026-02-02 21:41:32,338 | INFO     | did not find any defunct processes belonging to 372156
[2026-02-02 22:42:14] 2026-02-02 21:41:32,339 | INFO     | did not find any defunct processes belonging to 372156
[2026-02-02 22:42:14] 2026-02-02 21:41:32,339 | INFO     | ready for new job
[2026-02-02 22:42:14] 2026-02-02 21:41:32,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 22:42:14] 2026-02-02 21:41:32,340 | INFO     | **************************************
[2026-02-02 22:42:14] 2026-02-02 21:41:32,340 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 22:42:14] 2026-02-02 21:41:32,340 | INFO     | **************************************
[2026-02-02 22:42:14] 2026-02-02 21:41:32,340 | INFO     | 
[2026-02-02 22:42:14] 2026-02-02 21:41:32,340 | INFO     | architecture information:
[2026-02-02 22:42:14] 2026-02-02 21:41:32,340 | INFO     | executing command: cat /etc/os-release
[2026-02-02 22:42:14] 2026-02-02 21:41:32,345 | INFO     | cat /etc/os-release:
[2026-02-02 22:42:14] NAME="CentOS Linux"
[2026-02-02 22:42:14] VERSION="7 (Core)"
[2026-02-02 22:42:14] ID="centos"
[2026-02-02 22:42:14] ID_LIKE="rhel fedora"
[2026-02-02 22:42:14] VERSION_ID="7"
[2026-02-02 22:42:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 22:42:14] ANSI_COLOR="0;31"
[2026-02-02 22:42:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 22:42:14] HOME_URL="https://www.centos.org/"
[2026-02-02 22:42:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 22:42:14] 
[2026-02-02 22:42:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 22:42:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 22:42:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 22:42:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 22:42:14] 
[2026-02-02 22:42:14] 2026-02-02 21:41:32,346 | INFO     | **************************************
[2026-02-02 22:42:14] 2026-02-02 21:41:32,849 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-02 22:42:14] 2026-02-02 21:41:32,857 | INFO     | sufficient remaining disk space (82936070144 B)
[2026-02-02 22:42:14] 2026-02-02 21:41:32,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 22:42:14] 2026-02-02 21:41:32,858 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 22:42:14] 2026-02-02 21:41:32,858 | INFO     | update_server=False
[2026-02-02 22:42:14] 2026-02-02 21:41:32,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 22:42:14] 2026-02-02 21:41:32,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 22:42:14] 2026-02-02 21:41:32,858 | INFO     | aborting loop
[2026-02-02 22:42:14] 2026-02-02 21:41:32,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 22:42:14] 2026-02-02 21:41:32,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 22:42:14] 2026-02-02 21:41:33,014 | INFO     | all data control threads have been joined
[2026-02-02 22:42:14] 2026-02-02 21:41:33,265 | INFO     | all payload control threads have been joined
[2026-02-02 22:42:14] 2026-02-02 21:41:33,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 22:42:14] 2026-02-02 21:41:33,863 | INFO     | [job] retrieve thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:33,864 | INFO     | [job] job monitor thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:33,865 | INFO     | [job] queue monitor thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:33,878 | INFO     | all job control threads have been joined
[2026-02-02 22:42:14] 2026-02-02 21:41:34,019 | INFO     | [data] control thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,165 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,267 | INFO     | [payload] control thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,320 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,322 | INFO     | [job] validate thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,330 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,371 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,605 | INFO     | [payload] validate_post thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,838 | INFO     | [data] copytool_in thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:34,883 | INFO     | [job] control thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:35,275 | INFO     | [payload] failed_post thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:35,429 | INFO     | [data] copytool_out thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:41:36,864 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 22:42:14] 2026-02-02 21:42:03,822 | INFO     | PID=363153 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 22:42:14] 2026-02-02 21:42:03,822 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 22:42:14] 2026-02-02 21:42:03,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 22:42:14] 2026-02-02 21:42:03,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 22:42:14] 2026-02-02 21:42:08,526 | INFO     | [monitor] cgroup control has ended
[2026-02-02 22:42:14] 2026-02-02 21:42:09,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126118063208256)>', '<ExcThread(monitor, started 126117352568576)>']
[2026-02-02 22:42:14] 2026-02-02 21:42:09,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 22:42:14] 2026-02-02 21:42:09,852 | INFO     | [monitor] control thread has ended
[2026-02-02 22:42:14] 2026-02-02 21:42:14,638 | INFO     | all workflow threads have been joined
[2026-02-02 22:42:14] 2026-02-02 21:42:14,639 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 22:42:14] 2026-02-02 21:42:14,639 | INFO     | traces error code: 0
[2026-02-02 22:42:14] 2026-02-02 21:42:14,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 22:42:14] 2026-02-02 21:42:14,715 [wrapper] ==== pilot stdout END ====
[2026-02-02 22:42:14] 2026-02-02 21:42:14,717 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 22:42:14] 2026-02-02 21:42:14,718 [wrapper] pilotpid: 363153
[2026-02-02 22:42:14] 2026-02-02 21:42:14,719 [wrapper] Pilot exit status: 0
[2026-02-02 22:42:14] 2026-02-02 21:42:14,723 [wrapper] pandaids: 6993188861
[2026-02-02 22:42:14] 2026-02-02 21:42:14,734 [wrapper] cleanup supervisor_pilot  491570 363154
[2026-02-02 22:42:14] 2026-02-02 21:42:14,736 [wrapper] Test setup, not cleaning
[2026-02-02 22:42:14] 2026-02-02 21:42:14,737 [wrapper] apfmon messages muted
[2026-02-02 22:42:14] 2026-02-02 21:42:14,738 [wrapper] ==== wrapper stdout END ====
[2026-02-02 22:42:14] 2026-02-02 21:42:14,739 [wrapper] ==== wrapper stderr END ====
[2026-02-02 22:42:14]  *** Error codes and diagnostics ***
[2026-02-02 22:42:14]     "exeErrorCode": 0,
[2026-02-02 22:42:14]     "exeErrorDiag": "",
[2026-02-02 22:42:14]     "pilotErrorCode": 0,
[2026-02-02 22:42:14]     "pilotErrorDiag": "",
[2026-02-02 22:42:14]  *** Listing of results directory ***
[2026-02-02 22:42:14] total 902164
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc    584422 f&#195;&#169;vr.  2 14:12 pilot3.tar.gz
[2026-02-02 22:42:14] -rwx------ 1 boinc boinc     36322 f&#195;&#169;vr.  2 14:13 runpilot2-wrapper.sh
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc      5111 f&#195;&#169;vr.  2 14:15 queuedata.json
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc       100 f&#195;&#169;vr.  2 19:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 22:42:14] -rwxr-xr-x 1 boinc boinc      7986 f&#195;&#169;vr.  2 19:15 run_atlas
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc       105 f&#195;&#169;vr.  2 19:15 job.xml
[2026-02-02 22:42:14] -rw-r--r-- 2 boinc boinc     15845 f&#195;&#169;vr.  2 19:15 start_atlas.sh
[2026-02-02 22:42:14] drwxrwx--x 2 boinc boinc      4096 f&#195;&#169;vr.  2 19:15 shared
[2026-02-02 22:42:14] -rw-r--r-- 2 boinc boinc    597756 f&#195;&#169;vr.  2 19:15 input.tar.gz
[2026-02-02 22:42:14] -rw-r--r-- 2 boinc boinc 656528182 f&#195;&#169;vr.  2 19:15 EVNT.48431111._000028.pool.root.1
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc         0 f&#195;&#169;vr.  2 19:15 boinc_lockfile
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc      2543 f&#195;&#169;vr.  2 19:15 pandaJob.out
[2026-02-02 22:42:14] -rw------- 1 boinc boinc        52 f&#195;&#169;vr.  2 19:15 setup.sh.local
[2026-02-02 22:42:14] -rw------- 1 boinc boinc   1009774 f&#195;&#169;vr.  2 19:16 agis_schedconf.cvmfs.json
[2026-02-02 22:42:14] -rw------- 1 boinc boinc       417 f&#195;&#169;vr.  2 19:16 workernode_map.json
[2026-02-02 22:42:14] drwx------ 5 boinc boinc      4096 f&#195;&#169;vr.  2 19:16 pilot3
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc      6706 f&#195;&#169;vr.  2 22:29 init_data.xml
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc       532 f&#195;&#169;vr.  2 22:40 boinc_task_state.xml
[2026-02-02 22:42:14] -rw------- 1 boinc boinc 259055498 f&#195;&#169;vr.  2 22:41 HITS.48431113._001387.pool.root.1
[2026-02-02 22:42:14] -rw------- 1 boinc boinc      1017 f&#195;&#169;vr.  2 22:41 memory_monitor_summary.json
[2026-02-02 22:42:14] -rw------- 1 boinc boinc   1511668 f&#195;&#169;vr.  2 22:41 agis_ddmendpoints.agis.ALL.json
[2026-02-02 22:42:14] -rw------- 1 boinc boinc    370218 f&#195;&#169;vr.  2 22:41 log.48431113._001387.job.log.tgz.1
[2026-02-02 22:42:14] -rw------- 1 boinc boinc      6296 f&#195;&#169;vr.  2 22:41 heartbeat.json
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc      8192 f&#195;&#169;vr.  2 22:41 boinc_mmap_file
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc        28 f&#195;&#169;vr.  2 22:41 wrapper_checkpoint.txt
[2026-02-02 22:42:14] -rw------- 1 boinc boinc        95 f&#195;&#169;vr.  2 22:42 pilot_heartbeat.json
[2026-02-02 22:42:14] -rw------- 1 boinc boinc      4750 f&#195;&#169;vr.  2 22:42 pilotlog.txt
[2026-02-02 22:42:14] -rw------- 1 boinc boinc   1772820 f&#195;&#169;vr.  2 22:42 log.48431113._001387.job.log.1
[2026-02-02 22:42:14] -rw------- 1 boinc boinc       357 f&#195;&#169;vr.  2 22:42 output.list
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc       620 f&#195;&#169;vr.  2 22:42 runtime_log
[2026-02-02 22:42:14] -rw------- 1 boinc boinc   2160640 f&#195;&#169;vr.  2 22:42 result.tar.gz
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc      9413 f&#195;&#169;vr.  2 22:42 runtime_log.err
[2026-02-02 22:42:14] -rw------- 1 boinc boinc       644 f&#195;&#169;vr.  2 22:42 cvGKDm1u868nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1pSKDmesdBBo.diag
[2026-02-02 22:42:14] -rw-r--r-- 1 boinc boinc     21656 f&#195;&#169;vr.  2 22:42 stderr.txt
[2026-02-02 22:42:14] HITS file was successfully produced:
[2026-02-02 22:42:14] -rw------- 1 boinc boinc 259055498 f&#195;&#169;vr.  2 22:41 shared/HITS.pool.root.1
[2026-02-02 22:42:14]  *** Contents of shared directory: ***
[2026-02-02 22:42:14] total 896848
[2026-02-02 22:42:14] -rw-r--r-- 2 boinc boinc     15845 f&#195;&#169;vr.  2 19:15 start_atlas.sh
[2026-02-02 22:42:14] -rw-r--r-- 2 boinc boinc    597756 f&#195;&#169;vr.  2 19:15 input.tar.gz
[2026-02-02 22:42:14] -rw-r--r-- 2 boinc boinc 656528182 f&#195;&#169;vr.  2 19:15 ATLAS.root_0
[2026-02-02 22:42:14] -rw------- 1 boinc boinc 259055498 f&#195;&#169;vr.  2 22:41 HITS.pool.root.1
[2026-02-02 22:42:14] -rw------- 1 boinc boinc   2160640 f&#195;&#169;vr.  2 22:42 result.tar.gz
22:42:16 (354531): run_atlas exited; CPU time 24314.600618
22:42:16 (354531): called boinc_finish(0)

</stderr_txt>
]]>

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