Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:04:35 (11596): wrapper (7.7.26015): starting
13:04:35 (11596): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 13:04:35] Arguments: --nthreads 12
[2026-02-02 13:04:35] Threads: 12
[2026-02-02 13:04:35] Checking for CVMFS
[2026-02-02 13:04:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 13:04:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 13:04:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 13:04:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 13:04:36] 2.11.2.0 723 215885 99092 155796 3 49 17191791 20275200 1 130560 0 87591334 99.907 12701981 34310 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 13:04:36] CVMFS is ok
[2026-02-02 13:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 13:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 13:04:36] Further information can be found at the LHC@home message board.
[2026-02-02 13:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 13:04:36] Checking for apptainer binary...
[2026-02-02 13:04:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 13:04:36] Running /usr/bin/apptainer --version
[2026-02-02 13:04:36] apptainer version 1.3.2-1.el7
[2026-02-02 13:04:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 13:04:37] c-205-1.aglt2.org
[2026-02-02 13:04:37] apptainer works
[2026-02-02 13:04:37] Set ATHENA_PROC_NUMBER=12
[2026-02-02 13:04:37] Set ATHENA_CORE_NUMBER=12
[2026-02-02 13:04:37] Starting ATLAS job with PandaID=6996984942
[2026-02-02 13:04:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 14:44:33]  *** The last 200 lines of the pilot log: ***
[2026-02-02 14:44:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 14:44:33]  is_altstaged=None
[2026-02-02 14:44:33]  is_tar=False
[2026-02-02 14:44:33]  lfn=log.48431080._006755.job.log.tgz.1
[2026-02-02 14:44:33]  mtime=0
[2026-02-02 14:44:33]  protocol_id=None
[2026-02-02 14:44:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 14:44:33]  replicas=None
[2026-02-02 14:44:33]  scope=mc23_13p6TeV
[2026-02-02 14:44:33]  status=None
[2026-02-02 14:44:33]  status_code=0
[2026-02-02 14:44:33]  storage_token=
[2026-02-02 14:44:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6996984942/log.48431080._006755.job.log.tgz.1
[2026-02-02 14:44:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/49/log.48431080._006755.job.log.tgz.1
[2026-02-02 14:44:33]  workdir=None
[2026-02-02 14:44:33] ]
[2026-02-02 14:44:33] 2026-02-02 19:43:57,452 | INFO     | transferring file log.48431080._006755.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6996984942/log.48431080._006755.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-02 14:44:33] 2026-02-02 19:43:57,453 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6996984942/log.48431080._006755.job.log.tgz.1 /tmp/boinchome/slots/0/log.48431080._006755.job
[2026-02-02 14:44:33] 2026-02-02 19:43:57,475 | INFO     | adding to output.list: log.48431080._006755.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/49/log.48431080._006755.job.log.tg
[2026-02-02 14:44:33] 2026-02-02 19:43:57,476 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 14:44:33] 2026-02-02 19:43:57,476 | INFO     | summary of transferred files:
[2026-02-02 14:44:33] 2026-02-02 19:43:57,477 | INFO     |  -- lfn=log.48431080._006755.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 14:44:33] 2026-02-02 19:43:57,477 | INFO     | stage-out finished correctly
[2026-02-02 14:44:33] 2026-02-02 19:43:58,270 | INFO     | time since job start (5940s) is within the limit (349056.0s)
[2026-02-02 14:44:33] 2026-02-02 19:44:00,276 | INFO     | time since job start (5942s) is within the limit (349056.0s)
[2026-02-02 14:44:33] 2026-02-02 19:44:00,585 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 14:44:33] 2026-02-02 19:44:00,662 | INFO     | job 6996984942 has state=finished
[2026-02-02 14:44:33] 2026-02-02 19:44:00,662 | INFO     | preparing for final server update for job 6996984942 in state='finished'
[2026-02-02 14:44:33] 2026-02-02 19:44:00,662 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6996984942/jobReport.json
[2026-02-02 14:44:33] 2026-02-02 19:44:00,665 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-02 14:44:33] 2026-02-02 19:44:00,666 | INFO     | this job has now completed (state=finished)
[2026-02-02 14:44:33] 2026-02-02 19:44:00,666 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 14:44:33] 2026-02-02 19:44:00,666 | INFO     | log transfer has been attempted: DONE
[2026-02-02 14:44:33] 2026-02-02 19:44:00,666 | INFO     | job 6996984942 has finished - writing final server update
[2026-02-02 14:44:33] 2026-02-02 19:44:00,666 | INFO     | total number of processed events: 400 (read)
[2026-02-02 14:44:33] 2026-02-02 19:44:00,668 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996984942/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 14:44:33] 2026-02-02 19:44:00,669 | INFO     | extracted standard info from prmon json
[2026-02-02 14:44:33] 2026-02-02 19:44:00,669 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 14:44:33] 2026-02-02 19:44:00,669 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 14:44:33] 2026-02-02 19:44:00,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 14:44:33] 2026-02-02 19:44:00,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 14:44:33] 2026-02-02 19:44:00,671 | INFO     | fitting pss+swap vs Time
[2026-02-02 14:44:33] 2026-02-02 19:44:00,671 | INFO     | sum of square deviations: 226022842.5
[2026-02-02 14:44:33] 2026-02-02 19:44:00,671 | INFO     | sum of deviations: -6693459117.999998
[2026-02-02 14:44:33] 2026-02-02 19:44:00,672 | INFO     | mean x: 1770058541.5
[2026-02-02 14:44:33] 2026-02-02 19:44:00,672 | INFO     | mean y: 2790576.466666667
[2026-02-02 14:44:33] 2026-02-02 19:44:00,672 | INFO     | intersect: 52421450358.59445
[2026-02-02 14:44:33] 2026-02-02 19:44:00,672 | INFO     | chi2: 0.12190283360099109
[2026-02-02 14:44:33] 2026-02-02 19:44:00,672 | INFO     | current memory leak: -29.61 B/s (using 90 data points, chi2=0.12)
[2026-02-02 14:44:33] 2026-02-02 19:44:00,672 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | ..............................
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | . Timing measurements:
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | . get job = 0 s
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | . initial setup = 7 s
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | . payload setup = 6 s
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | . stage-in = 0 s
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | . payload execution = 5919 s
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | . stage-out = 0 s
[2026-02-02 14:44:33] 2026-02-02 19:44:00,673 | INFO     | . log creation = 0 s
[2026-02-02 14:44:33] 2026-02-02 19:44:00,674 | INFO     | ..............................
[2026-02-02 14:44:33] 2026-02-02 19:44:01,118 | INFO     | 
[2026-02-02 14:44:33] 2026-02-02 19:44:01,118 | INFO     | job summary report
[2026-02-02 14:44:33] 2026-02-02 19:44:01,118 | INFO     | --------------------------------------------------
[2026-02-02 14:44:33] 2026-02-02 19:44:01,118 | INFO     | PanDA job id: 6996984942
[2026-02-02 14:44:33] 2026-02-02 19:44:01,118 | INFO     | task id: 48431080
[2026-02-02 14:44:33] 2026-02-02 19:44:01,118 | INFO     | errors: (none)
[2026-02-02 14:44:33] 2026-02-02 19:44:01,119 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 14:44:33] 2026-02-02 19:44:01,119 | INFO     | pilot state: finished 
[2026-02-02 14:44:33] 2026-02-02 19:44:01,119 | INFO     | transexitcode: 0
[2026-02-02 14:44:33] 2026-02-02 19:44:01,119 | INFO     | exeerrorcode: 0
[2026-02-02 14:44:33] 2026-02-02 19:44:01,119 | INFO     | exeerrordiag: 
[2026-02-02 14:44:33] 2026-02-02 19:44:01,119 | INFO     | exitcode: 0
[2026-02-02 14:44:33] 2026-02-02 19:44:01,120 | INFO     | exitmsg: OK
[2026-02-02 14:44:33] 2026-02-02 19:44:01,120 | INFO     | cpuconsumptiontime: 63759 s
[2026-02-02 14:44:33] 2026-02-02 19:44:01,120 | INFO     | nevents: 400
[2026-02-02 14:44:33] 2026-02-02 19:44:01,120 | INFO     | neventsw: 0
[2026-02-02 14:44:33] 2026-02-02 19:44:01,120 | INFO     | pid: 21416
[2026-02-02 14:44:33] 2026-02-02 19:44:01,120 | INFO     | pgrp: 21416
[2026-02-02 14:44:33] 2026-02-02 19:44:01,121 | INFO     | corecount: 12
[2026-02-02 14:44:33] 2026-02-02 19:44:01,121 | INFO     | event service: False
[2026-02-02 14:44:33] 2026-02-02 19:44:01,121 | INFO     | sizes: {0: 2278110, 1: 2278344, 11: 2278344, 5927: 2305041, 5928: 2314039, 5931: 2314417}
[2026-02-02 14:44:33] 2026-02-02 19:44:01,121 | INFO     | --------------------------------------------------
[2026-02-02 14:44:33] 2026-02-02 19:44:01,121 | INFO     | 
[2026-02-02 14:44:33] 2026-02-02 19:44:01,121 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 14:44:33] 2026-02-02 19:44:01,152 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,152 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,152 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,152 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,155 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 14:44:33] 2026-02-02 19:44:01,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,155 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 14:44:33] 2026-02-02 19:44:01,155 | INFO     | job 6996984942 has completed (purged errors)
[2026-02-02 14:44:33] 2026-02-02 19:44:01,155 | INFO     | overall cleanup function is called
[2026-02-02 14:44:33] 2026-02-02 19:44:02,160 | INFO     | --- collectZombieJob: --- 10, [21416]
[2026-02-02 14:44:33] 2026-02-02 19:44:02,160 | INFO     | zombie collector waiting for pid 21416
[2026-02-02 14:44:33] 2026-02-02 19:44:02,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 14:44:33] 2026-02-02 19:44:02,160 | INFO     | collected zombie processes
[2026-02-02 14:44:33] 2026-02-02 19:44:02,160 | INFO     | will attempt to kill all subprocesses of pid=21416
[2026-02-02 14:44:33] 2026-02-02 19:44:02,248 | INFO     | process IDs to be killed: [21416] (in reverse order)
[2026-02-02 14:44:33] 2026-02-02 19:44:02,300 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 14:44:33] 2026-02-02 19:44:02,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 14:44:33] 2026-02-02 19:44:02,304 | INFO     | did not find any defunct processes belonging to 21416
[2026-02-02 14:44:33] 2026-02-02 19:44:02,307 | INFO     | did not find any defunct processes belonging to 21416
[2026-02-02 14:44:33] 2026-02-02 19:44:02,307 | INFO     | ready for new job
[2026-02-02 14:44:33] 2026-02-02 19:44:02,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 14:44:33] 2026-02-02 19:44:02,308 | INFO     | **************************************
[2026-02-02 14:44:33] 2026-02-02 19:44:02,309 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 14:44:33] 2026-02-02 19:44:02,309 | INFO     | **************************************
[2026-02-02 14:44:33] 2026-02-02 19:44:02,309 | INFO     | 
[2026-02-02 14:44:33] 2026-02-02 19:44:02,309 | INFO     | architecture information:
[2026-02-02 14:44:33] 2026-02-02 19:44:02,310 | INFO     | executing command: cat /etc/os-release
[2026-02-02 14:44:33] 2026-02-02 19:44:02,326 | INFO     | cat /etc/os-release:
[2026-02-02 14:44:33] NAME="CentOS Linux"
[2026-02-02 14:44:33] VERSION="7 (Core)"
[2026-02-02 14:44:33] ID="centos"
[2026-02-02 14:44:33] ID_LIKE="rhel fedora"
[2026-02-02 14:44:33] VERSION_ID="7"
[2026-02-02 14:44:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 14:44:33] ANSI_COLOR="0;31"
[2026-02-02 14:44:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 14:44:33] HOME_URL="https://www.centos.org/"
[2026-02-02 14:44:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 14:44:33] 
[2026-02-02 14:44:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 14:44:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 14:44:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 14:44:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 14:44:33] 
[2026-02-02 14:44:33] 2026-02-02 19:44:02,326 | INFO     | **************************************
[2026-02-02 14:44:33] 2026-02-02 19:44:02,829 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 14:44:33] 2026-02-02 19:44:02,846 | INFO     | sufficient remaining disk space (28530704384 B)
[2026-02-02 14:44:33] 2026-02-02 19:44:02,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 14:44:33] 2026-02-02 19:44:02,846 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 14:44:33] 2026-02-02 19:44:02,846 | INFO     | update_server=False
[2026-02-02 14:44:33] 2026-02-02 19:44:02,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 14:44:33] 2026-02-02 19:44:02,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 14:44:33] 2026-02-02 19:44:03,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 14:44:33] 2026-02-02 19:44:03,713 | INFO     | all payload control threads have been joined
[2026-02-02 14:44:33] 2026-02-02 19:44:03,852 | INFO     | [job] retrieve thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:03,861 | INFO     | [job] validate thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:03,938 | INFO     | all data control threads have been joined
[2026-02-02 14:44:33] 2026-02-02 19:44:03,982 | INFO     | all job control threads have been joined
[2026-02-02 14:44:33] 2026-02-02 19:44:03,983 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:04,003 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:04,024 | INFO     | [payload] validate_post thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:04,287 | INFO     | [data] copytool_in thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:04,602 | INFO     | [payload] failed_post thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:04,716 | INFO     | [payload] control thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:04,944 | INFO     | [data] control thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:04,988 | INFO     | [job] control thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:05,072 | INFO     | [data] copytool_out thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:05,107 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:05,681 | INFO     | job.realtimelogging is not enabled
[2026-02-02 14:44:33] 2026-02-02 19:44:05,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 14:44:33] 2026-02-02 19:44:06,088 | WARNING  | process 21416 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 14:44:33] 2026-02-02 19:44:06,157 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 14:44:33] 2026-02-02 19:44:06,239 | INFO     | number of running child processes to parent process 21416: 1
[2026-02-02 14:44:33] 2026-02-02 19:44:06,239 | INFO     | maximum number of monitored processes: 6
[2026-02-02 14:44:33] 2026-02-02 19:44:06,239 | INFO     | aborting job monitoring since job object (job id=6996984942) has expired
[2026-02-02 14:44:33] 2026-02-02 19:44:06,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 14:44:33] 2026-02-02 19:44:06,240 | INFO     | will abort loop
[2026-02-02 14:44:33] 2026-02-02 19:44:06,686 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:06,765 | INFO     | [job] queue monitor thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:06,853 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:07,245 | INFO     | [job] job monitor thread has finished
[2026-02-02 14:44:33] 2026-02-02 19:44:07,760 | INFO     | [monitor] cgroup control has ended
[2026-02-02 14:44:33] 2026-02-02 19:44:09,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894387902272)>', '<ExcThread(monitor, started 139893493708544)>']
[2026-02-02 14:44:33] 2026-02-02 19:44:14,163 | INFO     | all workflow threads have been joined
[2026-02-02 14:44:33] 2026-02-02 19:44:14,163 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 14:44:33] 2026-02-02 19:44:14,164 | INFO     | traces error code: 0
[2026-02-02 14:44:33] 2026-02-02 19:44:14,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 14:44:33] 2026-02-02 19:44:33,469 | INFO     | PID=15694 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 14:44:33] 2026-02-02 19:44:33,470 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 14:44:33] 2026-02-02 19:44:33,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 14:44:33] 2026-02-02 19:44:33,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 14:44:33] 2026-02-02 19:44:33,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 14:44:33] 2026-02-02 19:44:33,471 | INFO     | [monitor] control thread has ended
[2026-02-02 14:44:33] 2026-02-02 19:44:33,559 [wrapper] ==== pilot stdout END ====
[2026-02-02 14:44:33] 2026-02-02 19:44:33,564 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 14:44:33] 2026-02-02 19:44:33,567 [wrapper] pilotpid: 15694
[2026-02-02 14:44:33] 2026-02-02 19:44:33,571 [wrapper] Pilot exit status: 0
[2026-02-02 14:44:33] 2026-02-02 19:44:33,586 [wrapper] pandaids: 6996984942
[2026-02-02 14:44:33] 2026-02-02 19:44:33,623 [wrapper] cleanup supervisor_pilot 23211 15695
[2026-02-02 14:44:33] 2026-02-02 19:44:33,627 [wrapper] Test setup, not cleaning
[2026-02-02 14:44:33] 2026-02-02 19:44:33,631 [wrapper] apfmon messages muted
[2026-02-02 14:44:33] 2026-02-02 19:44:33,635 [wrapper] ==== wrapper stdout END ====
[2026-02-02 14:44:33] 2026-02-02 19:44:33,639 [wrapper] ==== wrapper stderr END ====
[2026-02-02 14:44:33]  *** Error codes and diagnostics ***
[2026-02-02 14:44:33]     "exeErrorCode": 0,
[2026-02-02 14:44:33]     "exeErrorDiag": "",
[2026-02-02 14:44:33]     "pilotErrorCode": 0,
[2026-02-02 14:44:33]     "pilotErrorDiag": "",
[2026-02-02 14:44:33]  *** Listing of results directory ***
[2026-02-02 14:44:33] total 898284
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas    584422 Feb  2 08:12 pilot3.tar.gz
[2026-02-02 14:44:33] -rwx------ 1 boincer umatlas     36322 Feb  2 08:12 runpilot2-wrapper.sh
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas      5111 Feb  2 08:12 queuedata.json
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas       100 Feb  2 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 14:44:33] -rwxr-xr-x 1 boincer umatlas      7986 Feb  2 13:04 run_atlas
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas       105 Feb  2 13:04 job.xml
[2026-02-02 14:44:33] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 13:04 start_atlas.sh
[2026-02-02 14:44:33] drwxrwx--x 2 boincer umatlas      4096 Feb  2 13:04 shared
[2026-02-02 14:44:33] -rw-r--r-- 2 boincer umatlas    597760 Feb  2 13:04 input.tar.gz
[2026-02-02 14:44:33] -rw-r--r-- 2 boincer umatlas 655889460 Feb  2 13:04 EVNT.48431078._000129.pool.root.1
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas         0 Feb  2 13:04 boinc_lockfile
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas      2558 Feb  2 13:04 pandaJob.out
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas        57 Feb  2 13:04 setup.sh.local
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas   1009774 Feb  2 13:04 agis_schedconf.cvmfs.json
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas   1511668 Feb  2 13:04 agis_ddmendpoints.agis.ALL.json
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas       444 Feb  2 13:04 workernode_map.json
[2026-02-02 14:44:33] drwx------ 5 boincer umatlas      4096 Feb  2 13:04 pilot3
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas      5952 Feb  2 14:40 init_data.xml
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas 257460722 Feb  2 14:43 HITS.48431080._006755.pool.root.1
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas       530 Feb  2 14:43 boinc_task_state.xml
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas      1046 Feb  2 14:43 memory_monitor_summary.json
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas    428201 Feb  2 14:43 log.48431080._006755.job.log.tgz.1
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas      6410 Feb  2 14:44 heartbeat.json
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas      8192 Feb  2 14:44 boinc_mmap_file
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas        27 Feb  2 14:44 wrapper_checkpoint.txt
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas        95 Feb  2 14:44 pilot_heartbeat.json
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas       745 Feb  2 14:44 pilotlog.txt
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas    848335 Feb  2 14:44 log.48431080._006755.job.log.1
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas       357 Feb  2 14:44 output.list
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas       620 Feb  2 14:44 runtime_log
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas   1290240 Feb  2 14:44 result.tar.gz
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas      9338 Feb  2 14:44 runtime_log.err
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas       658 Feb  2 14:44 bOeNDmNu868nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmkSKDmmSscSn.diag
[2026-02-02 14:44:33] -rw-r--r-- 1 boincer umatlas     21410 Feb  2 14:44 stderr.txt
[2026-02-02 14:44:33] HITS file was successfully produced:
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas 257460722 Feb  2 14:43 shared/HITS.pool.root.1
[2026-02-02 14:44:33]  *** Contents of shared directory: ***
[2026-02-02 14:44:33] total 893816
[2026-02-02 14:44:33] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 13:04 start_atlas.sh
[2026-02-02 14:44:33] -rw-r--r-- 2 boincer umatlas    597760 Feb  2 13:04 input.tar.gz
[2026-02-02 14:44:33] -rw-r--r-- 2 boincer umatlas 655889460 Feb  2 13:04 ATLAS.root_0
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas 257460722 Feb  2 14:43 HITS.pool.root.1
[2026-02-02 14:44:33] -rw------- 1 boincer umatlas   1290240 Feb  2 14:44 result.tar.gz
14:44:35 (11596): run_atlas exited; CPU time 63740.700464
14:44:35 (11596): called boinc_finish(0)

</stderr_txt>
]]>

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