Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:28:45 (3210321): wrapper (7.7.26015): starting
07:28:45 (3210321): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 07:28:45] Arguments: --nthreads 4
[2026-02-03 07:28:45] Threads: 4
[2026-02-03 07:28:45] Checking for CVMFS
[2026-02-03 07:28:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 07:28:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 07:28:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 07:28:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 07:28:46] 2.9.2.0 1536777 8170 104464 155820 0 50 23554943 36864000 0 130560 0 4710284 99.989 273551 18417 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-03 07:28:46] CVMFS is ok
[2026-02-03 07:28:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 07:28:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 07:28:46] Further information can be found at the LHC@home message board.
[2026-02-03 07:28:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 07:28:46] Checking for apptainer binary...
[2026-02-03 07:28:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 07:28:46] Running /usr/bin/apptainer --version
[2026-02-03 07:28:46] apptainer version 1.4.1-1.1
[2026-02-03 07:28:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 07:28:46] magicA244a
[2026-02-03 07:28:46] apptainer works
[2026-02-03 07:28:46] Set ATHENA_PROC_NUMBER=4
[2026-02-03 07:28:46] Set ATHENA_CORE_NUMBER=4
[2026-02-03 07:28:46] Starting ATLAS job with PandaID=6996985341
[2026-02-03 07:28:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 08:37:07]  *** The last 200 lines of the pilot log: ***
[2026-02-03 08:37:07] 2026-02-03 07:36:07,305 | INFO     | update_server=False
[2026-02-03 08:37:07] 2026-02-03 07:36:07,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 08:37:07] 2026-02-03 07:36:07,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 08:37:07] 2026-02-03 07:36:07,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 08:37:07] 2026-02-03 07:36:07,305 | INFO     | will abort loop
[2026-02-03 08:37:07] 2026-02-03 07:36:07,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 08:37:07] 2026-02-03 07:36:07,566 | INFO     | all payload control threads have been joined
[2026-02-03 08:37:07] 2026-02-03 07:36:07,694 | INFO     | all data control threads have been joined
[2026-02-03 08:37:07] 2026-02-03 07:36:07,926 | INFO     | job.realtimelogging is not enabled
[2026-02-03 08:37:07] 2026-02-03 07:36:08,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 08:37:07] 2026-02-03 07:36:08,194 | INFO     | all job control threads have been joined
[2026-02-03 08:37:07] 2026-02-03 07:36:08,306 | INFO     | [job] retrieve thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:08,311 | INFO     | [job] queue monitor thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:08,311 | INFO     | [job] job monitor thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:08,525 | INFO     | [payload] validate_post thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:08,571 | INFO     | [payload] control thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:08,700 | INFO     | [data] control thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:08,932 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:09,200 | INFO     | [job] control thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:09,216 | INFO     | [payload] failed_post thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:09,434 | INFO     | [job] validate thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:09,544 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:09,592 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:09,659 | INFO     | [data] copytool_in thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:09,797 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:10,024 | INFO     | [data] copytool_out thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:11,312 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 08:37:07] 2026-02-03 07:36:37,373 | INFO     | PID=3214426 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 08:37:07] 2026-02-03 07:36:37,373 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 08:37:07] 2026-02-03 07:36:37,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 08:37:07] 2026-02-03 07:36:37,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 08:37:07] 2026-02-03 07:37:02,169 | INFO     | [monitor] cgroup control has ended
[2026-02-03 08:37:07] 2026-02-03 07:37:02,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165017728832)>', '<ExcThread(monitor, started 140164286367488)>']
[2026-02-03 08:37:07] 2026-02-03 07:37:03,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 08:37:07] 2026-02-03 07:37:03,513 | INFO     | [monitor] control thread has ended
[2026-02-03 08:37:07] 2026-02-03 07:37:07,713 | INFO     | all workflow threads have been joined
[2026-02-03 08:37:07] 2026-02-03 07:37:07,713 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 08:37:07] 2026-02-03 07:37:07,714 | INFO     | traces error code: 0
[2026-02-03 08:37:07] 2026-02-03 07:37:07,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 08:37:07] 2026-02-03 07:37:07,768 [wrapper] ==== pilot stdout END ====
[2026-02-03 08:37:07] 2026-02-03 07:37:07,770 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 08:37:07] 2026-02-03 07:37:07,773 [wrapper] pilotpid: 3214426
[2026-02-03 08:37:07] 2026-02-03 07:37:07,775 [wrapper] Pilot exit status: 0
[2026-02-03 08:37:07] 2026-02-03 07:37:07,783 [wrapper] pandaids: 6996985341
[2026-02-03 08:37:07] 2026-02-03 07:37:07,802 [wrapper] cleanup supervisor_pilot 3224988 3214427
[2026-02-03 08:37:07] 2026-02-03 07:37:07,804 [wrapper] Test setup, not cleaning
[2026-02-03 08:37:07] 2026-02-03 07:37:07,807 [wrapper] apfmon messages muted
[2026-02-03 08:37:07] 2026-02-03 07:37:07,809 [wrapper] ==== wrapper stdout END ====
[2026-02-03 08:37:07] 2026-02-03 07:37:07,812 [wrapper] ==== wrapper stderr END ====
[2026-02-03 08:37:07]  *** Error codes and diagnostics ***
[2026-02-03 08:37:07]     "exeErrorCode": 0,
[2026-02-03 08:37:07]     "exeErrorDiag": "",
[2026-02-03 08:37:07]     "pilotErrorCode": 0,
[2026-02-03 08:37:07]     "pilotErrorDiag": "",
[2026-02-03 08:37:07]  *** Listing of results directory ***
[2026-02-03 08:37:07] total 672216
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc    584422 Feb  2 14:12 pilot3.tar.gz
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc      5111 Feb  2 14:12 queuedata.json
[2026-02-03 08:37:07] -rwx------ 1 boinc boinc     36322 Feb  2 14:12 runpilot2-wrapper.sh
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc       100 Feb  3 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 08:37:07] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 07:28 run_atlas
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc       105 Feb  3 07:28 job.xml
[2026-02-03 08:37:07] -rw-r--r-- 2 boinc boinc 496844071 Feb  3 07:28 EVNT.48317889._000131.pool.root.1
[2026-02-03 08:37:07] -rw-r--r-- 2 boinc boinc    597750 Feb  3 07:28 input.tar.gz
[2026-02-03 08:37:07] -rw-r--r-- 2 boinc boinc     15845 Feb  3 07:28 start_atlas.sh
[2026-02-03 08:37:07] drwxrwx--x 2 boinc boinc      4096 Feb  3 07:28 shared
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc         0 Feb  3 07:28 boinc_setup_complete
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc      6438 Feb  3 07:28 init_data.xml
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc         0 Feb  3 07:28 boinc_lockfile
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc      2518 Feb  3 07:28 pandaJob.out
[2026-02-03 08:37:07] -rw------- 1 boinc boinc   1009324 Feb  3 07:28 agis_schedconf.cvmfs.json
[2026-02-03 08:37:07] -rw------- 1 boinc boinc   1511668 Feb  3 07:28 agis_ddmendpoints.agis.ALL.json
[2026-02-03 08:37:07] -rw------- 1 boinc boinc       420 Feb  3 07:28 workernode_map.json
[2026-02-03 08:37:07] drwx------ 5 boinc boinc      4096 Feb  3 07:28 pilot3
[2026-02-03 08:37:07] -rw------- 1 boinc boinc 185898343 Feb  3 08:35 HITS.48317892._010292.pool.root.1
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc       530 Feb  3 08:35 boinc_task_state.xml
[2026-02-03 08:37:07] -rw------- 1 boinc boinc      1017 Feb  3 08:36 memory_monitor_summary.json
[2026-02-03 08:37:07] -rw------- 1 boinc boinc    240055 Feb  3 08:36 log.48317892._010292.job.log.tgz.1
[2026-02-03 08:37:07] -rw------- 1 boinc boinc      6296 Feb  3 08:36 heartbeat.json
[2026-02-03 08:37:07] -rw------- 1 boinc boinc        95 Feb  3 08:36 pilot_heartbeat.json
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc        27 Feb  3 08:36 wrapper_checkpoint.txt
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc      8192 Feb  3 08:36 boinc_mmap_file
[2026-02-03 08:37:07] -rw------- 1 boinc boinc      5344 Feb  3 08:37 pilotlog.txt
[2026-02-03 08:37:07] -rw------- 1 boinc boinc    601404 Feb  3 08:37 log.48317892._010292.job.log.1
[2026-02-03 08:37:07] -rw------- 1 boinc boinc       357 Feb  3 08:37 output.list
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc       620 Feb  3 08:37 runtime_log
[2026-02-03 08:37:07] -rw------- 1 boinc boinc    860160 Feb  3 08:37 result.tar.gz
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc      8916 Feb  3 08:37 runtime_log.err
[2026-02-03 08:37:07] -rw------- 1 boinc boinc       661 Feb  3 08:37 1dJKDmau868n9Rq4apOajLDm4fhM0noT9bVooX4SDmMPSKDmZuKGan.diag
[2026-02-03 08:37:07] -rw-r--r-- 1 boinc boinc      7517 Feb  3 08:37 stderr.txt
[2026-02-03 08:37:07] HITS file was successfully produced:
[2026-02-03 08:37:07] -rw------- 1 boinc boinc 185898343 Feb  3 08:35 shared/HITS.pool.root.1
[2026-02-03 08:37:07]  *** Contents of shared directory: ***
[2026-02-03 08:37:07] total 668192
[2026-02-03 08:37:07] -rw-r--r-- 2 boinc boinc 496844071 Feb  3 07:28 ATLAS.root_0
[2026-02-03 08:37:07] -rw-r--r-- 2 boinc boinc    597750 Feb  3 07:28 input.tar.gz
[2026-02-03 08:37:07] -rw-r--r-- 2 boinc boinc     15845 Feb  3 07:28 start_atlas.sh
[2026-02-03 08:37:07] -rw------- 1 boinc boinc 185898343 Feb  3 08:35 HITS.pool.root.1
[2026-02-03 08:37:07] -rw------- 1 boinc boinc    860160 Feb  3 08:37 result.tar.gz
08:37:09 (3210321): run_atlas exited; CPU time 15178.733804
08:37:09 (3210321): called boinc_finish(0)

</stderr_txt>
]]>

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