Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:17:43 (25756): wrapper (7.7.26015): starting
12:17:43 (25756): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 12:17:43] Arguments: --nthreads 12
[2026-02-02 12:17:43] Threads: 12
[2026-02-02 12:17:43] Checking for CVMFS
[2026-02-02 12:17:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 12:17:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 12:17:43] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 12:17:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 12:17:43] 2.11.2.0 3103 175866 101232 155794 2 50 15823410 20275201 1 130560 0 75056355 99.922 9334237 30580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 12:17:43] CVMFS is ok
[2026-02-02 12:17:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 12:17:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 12:17:43] Further information can be found at the LHC@home message board.
[2026-02-02 12:17:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 12:17:43] Checking for apptainer binary...
[2026-02-02 12:17:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 12:17:43] Running /usr/bin/apptainer --version
[2026-02-02 12:17:43] apptainer version 1.3.2-1.el7
[2026-02-02 12:17:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 12:17:45] c-115-41.aglt2.org
[2026-02-02 12:17:45] apptainer works
[2026-02-02 12:17:45] Set ATHENA_PROC_NUMBER=12
[2026-02-02 12:17:45] Set ATHENA_CORE_NUMBER=12
[2026-02-02 12:17:45] Starting ATLAS job with PandaID=6996650453
[2026-02-02 12:17:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 13:29:16]  *** The last 200 lines of the pilot log: ***
[2026-02-02 13:29:16]  is_tar=False
[2026-02-02 13:29:16]  lfn=log.48317931._013994.job.log.tgz.1
[2026-02-02 13:29:16]  mtime=0
[2026-02-02 13:29:16]  protocol_id=None
[2026-02-02 13:29:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 13:29:16]  replicas=None
[2026-02-02 13:29:16]  scope=mc23_13p6TeV
[2026-02-02 13:29:16]  status=None
[2026-02-02 13:29:16]  status_code=0
[2026-02-02 13:29:16]  storage_token=
[2026-02-02 13:29:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6996650453/log.48317931._013994.job.log.tgz.1
[2026-02-02 13:29:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/c1/log.48317931._013994.job.log.tgz.1
[2026-02-02 13:29:16]  workdir=None
[2026-02-02 13:29:16] ]
[2026-02-02 13:29:16] 2026-02-02 18:28:22,628 | INFO     | transferring file log.48317931._013994.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6996650453/log.48317931._013994.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-02 13:29:16] 2026-02-02 18:28:22,629 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6996650453/log.48317931._013994.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317931._013994.job
[2026-02-02 13:29:16] 2026-02-02 18:28:22,649 | INFO     | adding to output.list: log.48317931._013994.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/c1/log.48317931._013994.job.log.tg
[2026-02-02 13:29:16] 2026-02-02 18:28:22,650 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 13:29:16] 2026-02-02 18:28:22,650 | INFO     | summary of transferred files:
[2026-02-02 13:29:16] 2026-02-02 18:28:22,651 | INFO     |  -- lfn=log.48317931._013994.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 13:29:16] 2026-02-02 18:28:22,651 | INFO     | stage-out finished correctly
[2026-02-02 13:29:16] 2026-02-02 18:28:23,204 | INFO     | time since job start (4219s) is within the limit (349056.0s)
[2026-02-02 13:29:16] 2026-02-02 18:28:23,330 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 13:29:16] 2026-02-02 18:28:25,209 | INFO     | time since job start (4221s) is within the limit (349056.0s)
[2026-02-02 13:29:16] 2026-02-02 18:28:25,723 | WARNING  | process 1523 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 13:29:16] 2026-02-02 18:28:25,723 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996650453/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 13:29:16] 2026-02-02 18:28:25,808 | INFO     | number of running child processes to parent process 1523: 1
[2026-02-02 13:29:16] 2026-02-02 18:28:25,809 | INFO     | maximum number of monitored processes: 6
[2026-02-02 13:29:16] 2026-02-02 18:28:26,282 | INFO     | job 6996650453 has state=finished
[2026-02-02 13:29:16] 2026-02-02 18:28:26,282 | INFO     | preparing for final server update for job 6996650453 in state='finished'
[2026-02-02 13:29:16] 2026-02-02 18:28:26,342 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,343 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6996650453/jobReport.json
[2026-02-02 13:29:16] 2026-02-02 18:28:26,345 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-02 13:29:16] 2026-02-02 18:28:26,346 | INFO     | this job has now completed (state=finished)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,346 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,346 | INFO     | log transfer has been attempted: DONE
[2026-02-02 13:29:16] 2026-02-02 18:28:26,347 | INFO     | job 6996650453 has finished - writing final server update
[2026-02-02 13:29:16] 2026-02-02 18:28:26,347 | INFO     | total number of processed events: 400 (read)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,349 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996650453/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,349 | INFO     | extracted standard info from prmon json
[2026-02-02 13:29:16] 2026-02-02 18:28:26,349 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 13:29:16] 2026-02-02 18:28:26,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 13:29:16] 2026-02-02 18:28:26,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 13:29:16] 2026-02-02 18:28:26,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 13:29:16] 2026-02-02 18:28:26,351 | INFO     | fitting pss+swap vs Time
[2026-02-02 13:29:16] 2026-02-02 18:28:26,351 | INFO     | sum of square deviations: 73882315.5
[2026-02-02 13:29:16] 2026-02-02 18:28:26,352 | INFO     | sum of deviations: -2430645772.0
[2026-02-02 13:29:16] 2026-02-02 18:28:26,352 | INFO     | mean x: 1770054873.5
[2026-02-02 13:29:16] 2026-02-02 18:28:26,352 | INFO     | mean y: 2735285.8387096776
[2026-02-02 13:29:16] 2026-02-02 18:28:26,352 | INFO     | intersect: 58235566313.99956
[2026-02-02 13:29:16] 2026-02-02 18:28:26,352 | INFO     | chi2: 0.08491024218665853
[2026-02-02 13:29:16] 2026-02-02 18:28:26,352 | INFO     | current memory leak: -32.90 B/s (using 62 data points, chi2=0.08)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,352 | INFO     | could have reported an average CPU frequency of 1706 MHz (6 samples)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | ..............................
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | . Timing measurements:
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | . get job = 0 s
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | . initial setup = 7 s
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | . payload setup = 7 s
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | . stage-in = 0 s
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | . payload execution = 4193 s
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | . stage-out = 0 s
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | . log creation = 0 s
[2026-02-02 13:29:16] 2026-02-02 18:28:26,353 | INFO     | ..............................
[2026-02-02 13:29:16] 2026-02-02 18:28:26,424 | INFO     | 
[2026-02-02 13:29:16] 2026-02-02 18:28:26,424 | INFO     | job summary report
[2026-02-02 13:29:16] 2026-02-02 18:28:26,424 | INFO     | --------------------------------------------------
[2026-02-02 13:29:16] 2026-02-02 18:28:26,424 | INFO     | PanDA job id: 6996650453
[2026-02-02 13:29:16] 2026-02-02 18:28:26,425 | INFO     | task id: 48317931
[2026-02-02 13:29:16] 2026-02-02 18:28:26,425 | INFO     | errors: (none)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,425 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 13:29:16] 2026-02-02 18:28:26,425 | INFO     | pilot state: finished 
[2026-02-02 13:29:16] 2026-02-02 18:28:26,425 | INFO     | transexitcode: 0
[2026-02-02 13:29:16] 2026-02-02 18:28:26,425 | INFO     | exeerrorcode: 0
[2026-02-02 13:29:16] 2026-02-02 18:28:26,425 | INFO     | exeerrordiag: 
[2026-02-02 13:29:16] 2026-02-02 18:28:26,425 | INFO     | exitcode: 0
[2026-02-02 13:29:16] 2026-02-02 18:28:26,426 | INFO     | exitmsg: OK
[2026-02-02 13:29:16] 2026-02-02 18:28:26,426 | INFO     | cpuconsumptiontime: 43574 s
[2026-02-02 13:29:16] 2026-02-02 18:28:26,426 | INFO     | nevents: 400
[2026-02-02 13:29:16] 2026-02-02 18:28:26,426 | INFO     | neventsw: 0
[2026-02-02 13:29:16] 2026-02-02 18:28:26,426 | INFO     | pid: 1523
[2026-02-02 13:29:16] 2026-02-02 18:28:26,426 | INFO     | pgrp: 1523
[2026-02-02 13:29:16] 2026-02-02 18:28:26,426 | INFO     | corecount: 12
[2026-02-02 13:29:16] 2026-02-02 18:28:26,426 | INFO     | event service: False
[2026-02-02 13:29:16] 2026-02-02 18:28:26,427 | INFO     | sizes: {0: 2277783, 1: 2278244, 11: 2278244, 4205: 2304139, 4207: 2313137, 4208: 2313193, 4211: 2313515}
[2026-02-02 13:29:16] 2026-02-02 18:28:26,427 | INFO     | --------------------------------------------------
[2026-02-02 13:29:16] 2026-02-02 18:28:26,427 | INFO     | 
[2026-02-02 13:29:16] 2026-02-02 18:28:26,427 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 13:29:16] 2026-02-02 18:28:26,453 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,453 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,453 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,453 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,454 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,456 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,456 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 13:29:16] 2026-02-02 18:28:26,456 | INFO     | job 6996650453 has completed (purged errors)
[2026-02-02 13:29:16] 2026-02-02 18:28:26,456 | INFO     | overall cleanup function is called
[2026-02-02 13:29:16] 2026-02-02 18:28:27,465 | INFO     | --- collectZombieJob: --- 10, [1523]
[2026-02-02 13:29:16] 2026-02-02 18:28:27,465 | INFO     | zombie collector waiting for pid 1523
[2026-02-02 13:29:16] 2026-02-02 18:28:27,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 13:29:16] 2026-02-02 18:28:27,465 | INFO     | collected zombie processes
[2026-02-02 13:29:16] 2026-02-02 18:28:27,465 | INFO     | will attempt to kill all subprocesses of pid=1523
[2026-02-02 13:29:16] 2026-02-02 18:28:27,555 | INFO     | process IDs to be killed: [1523] (in reverse order)
[2026-02-02 13:29:16] 2026-02-02 18:28:27,606 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 13:29:16] 2026-02-02 18:28:27,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 13:29:16] 2026-02-02 18:28:27,609 | INFO     | did not find any defunct processes belonging to 1523
[2026-02-02 13:29:16] 2026-02-02 18:28:27,612 | INFO     | did not find any defunct processes belonging to 1523
[2026-02-02 13:29:16] 2026-02-02 18:28:27,612 | INFO     | ready for new job
[2026-02-02 13:29:16] 2026-02-02 18:28:27,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 13:29:16] 2026-02-02 18:28:27,613 | INFO     | **************************************
[2026-02-02 13:29:16] 2026-02-02 18:28:27,613 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 13:29:16] 2026-02-02 18:28:27,614 | INFO     | **************************************
[2026-02-02 13:29:16] 2026-02-02 18:28:27,614 | INFO     | 
[2026-02-02 13:29:16] 2026-02-02 18:28:27,614 | INFO     | architecture information:
[2026-02-02 13:29:16] 2026-02-02 18:28:27,615 | INFO     | executing command: cat /etc/os-release
[2026-02-02 13:29:16] 2026-02-02 18:28:27,629 | INFO     | cat /etc/os-release:
[2026-02-02 13:29:16] NAME="CentOS Linux"
[2026-02-02 13:29:16] VERSION="7 (Core)"
[2026-02-02 13:29:16] ID="centos"
[2026-02-02 13:29:16] ID_LIKE="rhel fedora"
[2026-02-02 13:29:16] VERSION_ID="7"
[2026-02-02 13:29:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 13:29:16] ANSI_COLOR="0;31"
[2026-02-02 13:29:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 13:29:16] HOME_URL="https://www.centos.org/"
[2026-02-02 13:29:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 13:29:16] 
[2026-02-02 13:29:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 13:29:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 13:29:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 13:29:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 13:29:16] 
[2026-02-02 13:29:16] 2026-02-02 18:28:27,630 | INFO     | **************************************
[2026-02-02 13:29:16] 2026-02-02 18:28:28,133 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 13:29:16] 2026-02-02 18:28:28,150 | INFO     | sufficient remaining disk space (18026070016 B)
[2026-02-02 13:29:16] 2026-02-02 18:28:28,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 13:29:16] 2026-02-02 18:28:28,151 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 13:29:16] 2026-02-02 18:28:28,151 | INFO     | update_server=False
[2026-02-02 13:29:16] 2026-02-02 18:28:28,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 13:29:16] 2026-02-02 18:28:28,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:29:16] 2026-02-02 18:28:28,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 13:29:16] 2026-02-02 18:28:28,309 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 13:29:16] 2026-02-02 18:28:28,310 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 13:29:16] 2026-02-02 18:28:28,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:29:16] 2026-02-02 18:28:28,310 | INFO     | will abort loop
[2026-02-02 13:29:16] 2026-02-02 18:28:28,616 | INFO     | all data control threads have been joined
[2026-02-02 13:29:16] 2026-02-02 18:28:29,123 | INFO     | all payload control threads have been joined
[2026-02-02 13:29:16] 2026-02-02 18:28:29,155 | INFO     | [job] retrieve thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:29,156 | INFO     | [job] queue monitor thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:29,197 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:29,274 | INFO     | [payload] failed_post thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:29,315 | INFO     | [job] job monitor thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:29,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 13:29:16] 2026-02-02 18:28:29,441 | INFO     | all job control threads have been joined
[2026-02-02 13:29:16] 2026-02-02 18:28:29,450 | INFO     | [payload] validate_post thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:29,583 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:29,587 | INFO     | [data] copytool_in thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:29,621 | INFO     | [data] control thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:30,128 | INFO     | [payload] control thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:30,240 | INFO     | [data] copytool_out thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:30,312 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:30,447 | INFO     | [job] control thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:30,503 | INFO     | [job] validate thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:33,416 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:38,258 | INFO     | job.realtimelogging is not enabled
[2026-02-02 13:29:16] 2026-02-02 18:28:39,263 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 13:29:16] 2026-02-02 18:28:58,457 | INFO     | PID=29437 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 13:29:16] 2026-02-02 18:28:58,458 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 13:29:16] 2026-02-02 18:28:58,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 13:29:16] 2026-02-02 18:28:58,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 13:29:16] 2026-02-02 18:29:10,866 | INFO     | [monitor] cgroup control has ended
[2026-02-02 13:29:16] 2026-02-02 18:29:10,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704037541696)>', '<ExcThread(monitor, started 140702717568768)>']
[2026-02-02 13:29:16] 2026-02-02 18:29:11,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 13:29:16] 2026-02-02 18:29:11,523 | INFO     | [monitor] control thread has ended
[2026-02-02 13:29:16] 2026-02-02 18:29:15,928 | INFO     | all workflow threads have been joined
[2026-02-02 13:29:16] 2026-02-02 18:29:15,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 13:29:16] 2026-02-02 18:29:15,935 | INFO     | traces error code: 0
[2026-02-02 13:29:16] 2026-02-02 18:29:15,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 13:29:16] 2026-02-02 18:29:16,060 [wrapper] ==== pilot stdout END ====
[2026-02-02 13:29:16] 2026-02-02 18:29:16,065 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 13:29:16] 2026-02-02 18:29:16,068 [wrapper] pilotpid: 29437
[2026-02-02 13:29:16] 2026-02-02 18:29:16,072 [wrapper] Pilot exit status: 0
[2026-02-02 13:29:16] 2026-02-02 18:29:16,088 [wrapper] pandaids: 6996650453
[2026-02-02 13:29:16] 2026-02-02 18:29:16,142 [wrapper] cleanup supervisor_pilot 27510 29438
[2026-02-02 13:29:16] 2026-02-02 18:29:16,146 [wrapper] Test setup, not cleaning
[2026-02-02 13:29:16] 2026-02-02 18:29:16,151 [wrapper] apfmon messages muted
[2026-02-02 13:29:16] 2026-02-02 18:29:16,155 [wrapper] ==== wrapper stdout END ====
[2026-02-02 13:29:16] 2026-02-02 18:29:16,158 [wrapper] ==== wrapper stderr END ====
[2026-02-02 13:29:16]  *** Error codes and diagnostics ***
[2026-02-02 13:29:16]     "exeErrorCode": 0,
[2026-02-02 13:29:16]     "exeErrorDiag": "",
[2026-02-02 13:29:16]     "pilotErrorCode": 0,
[2026-02-02 13:29:16]     "pilotErrorDiag": "",
[2026-02-02 13:29:16]  *** Listing of results directory ***
[2026-02-02 13:29:16] total 668540
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas    584422 Feb  2 05:55 pilot3.tar.gz
[2026-02-02 13:29:16] -rwx------ 1 boincer umatlas     36322 Feb  2 05:59 runpilot2-wrapper.sh
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas      5111 Feb  2 06:01 queuedata.json
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas       100 Feb  2 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 13:29:16] -rwxr-xr-x 1 boincer umatlas      7986 Feb  2 12:17 run_atlas
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas       105 Feb  2 12:17 job.xml
[2026-02-02 13:29:16] -rw-r--r-- 2 boincer umatlas 492244352 Feb  2 12:17 EVNT.48317929._000254.pool.root.1
[2026-02-02 13:29:16] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 12:17 start_atlas.sh
[2026-02-02 13:29:16] drwxrwx--x 2 boincer umatlas      4096 Feb  2 12:17 shared
[2026-02-02 13:29:16] -rw-r--r-- 2 boincer umatlas    597763 Feb  2 12:17 input.tar.gz
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas         0 Feb  2 12:17 boinc_lockfile
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas      2514 Feb  2 12:17 pandaJob.out
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas        57 Feb  2 12:17 setup.sh.local
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas   1009772 Feb  2 12:17 agis_schedconf.cvmfs.json
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas   1511668 Feb  2 12:17 agis_ddmendpoints.agis.ALL.json
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas       445 Feb  2 12:18 workernode_map.json
[2026-02-02 13:29:16] drwx------ 5 boincer umatlas      4096 Feb  2 12:18 pilot3
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas 186345370 Feb  2 13:27 HITS.48317931._013994.pool.root.1
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas       530 Feb  2 13:27 boinc_task_state.xml
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas      5954 Feb  2 13:28 init_data.xml
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas      1057 Feb  2 13:28 memory_monitor_summary.json
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas    408851 Feb  2 13:28 log.48317931._013994.job.log.tgz.1
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas      6420 Feb  2 13:28 heartbeat.json
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas        95 Feb  2 13:28 pilot_heartbeat.json
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas        27 Feb  2 13:29 wrapper_checkpoint.txt
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas      8192 Feb  2 13:29 boinc_mmap_file
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas      5000 Feb  2 13:29 pilotlog.txt
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas    618375 Feb  2 13:29 log.48317931._013994.job.log.1
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas       357 Feb  2 13:29 output.list
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas       620 Feb  2 13:29 runtime_log
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas   1044480 Feb  2 13:29 result.tar.gz
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas      9343 Feb  2 13:29 runtime_log.err
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas       659 Feb  2 13:29 9mYLDmCp668nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbhSKDmLT2Vfm.diag
[2026-02-02 13:29:16] -rw-r--r-- 1 boincer umatlas     21535 Feb  2 13:29 stderr.txt
[2026-02-02 13:29:16] HITS file was successfully produced:
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas 186345370 Feb  2 13:27 shared/HITS.pool.root.1
[2026-02-02 13:29:16]  *** Contents of shared directory: ***
[2026-02-02 13:29:16] total 664316
[2026-02-02 13:29:16] -rw-r--r-- 2 boincer umatlas 492244352 Feb  2 12:17 ATLAS.root_0
[2026-02-02 13:29:16] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 12:17 start_atlas.sh
[2026-02-02 13:29:16] -rw-r--r-- 2 boincer umatlas    597763 Feb  2 12:17 input.tar.gz
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas 186345370 Feb  2 13:27 HITS.pool.root.1
[2026-02-02 13:29:16] -rw------- 1 boincer umatlas   1044480 Feb  2 13:29 result.tar.gz
13:29:17 (25756): run_atlas exited; CPU time 43551.697262
13:29:17 (25756): called boinc_finish(0)

</stderr_txt>
]]>

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