Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:50:00 (3778936): wrapper (7.7.26015): starting
10:50:00 (3778936): wrapper: running run_atlas (--nthreads 6)
[2026-02-03 10:50:00] Arguments: --nthreads 6
[2026-02-03 10:50:00] Threads: 6
[2026-02-03 10:50:00] Checking for CVMFS
[2026-02-03 10:50:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 10:50:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 10:50:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 10:50:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 10:50:42] 2.13.3.0 3779156 0 29468 155812 3 1 14867698 20971521 0 130560 0 0 0.000 1338 67 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-03 10:50:42] CVMFS is ok
[2026-02-03 10:50:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 10:50:42] Checking for apptainer binary...
[2026-02-03 10:50:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 10:50:42] Running /usr/bin/apptainer --version
[2026-02-03 10:50:42] apptainer version 1.4.5-2.el9
[2026-02-03 10:50:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 10:50:43] testio005
[2026-02-03 10:50:43] apptainer works
[2026-02-03 10:50:43] Set ATHENA_PROC_NUMBER=6
[2026-02-03 10:50:43] Set ATHENA_CORE_NUMBER=6
[2026-02-03 10:50:43] Starting ATLAS job with PandaID=6996650439
[2026-02-03 10:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 12:40:49]  *** The last 200 lines of the pilot log: ***
[2026-02-03 12:40:49] 2026-02-03 03:40:17,476 | INFO     | PID=3783310 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 12:40:49] 2026-02-03 03:40:17,828 | INFO     | monitor loop #496: job 0:6996650439 is in state 'finished'
[2026-02-03 12:40:49] 2026-02-03 03:40:17,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,903 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,904 | INFO     | reading metadata from: /var/lib/boinc/slots/4/PanDA_Pilot-6996650439/jobReport.json
[2026-02-03 12:40:49] 2026-02-03 03:40:17,905 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/4/workernode_map.json
[2026-02-03 12:40:49] 2026-02-03 03:40:17,905 | INFO     | this job has now completed (state=finished)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,906 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,906 | INFO     | log transfer has been attempted: DONE
[2026-02-03 12:40:49] 2026-02-03 03:40:17,906 | INFO     | job 6996650439 has finished - writing final server update
[2026-02-03 12:40:49] 2026-02-03 03:40:17,906 | INFO     | total number of processed events: 400 (read)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,909 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6996650439/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,910 | INFO     | extracted standard info from prmon json
[2026-02-03 12:40:49] 2026-02-03 03:40:17,910 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 12:40:49] 2026-02-03 03:40:17,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 12:40:49] 2026-02-03 03:40:17,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 12:40:49] 2026-02-03 03:40:17,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:40:49] 2026-02-03 03:40:17,912 | INFO     | fitting pss+swap vs Time
[2026-02-03 12:40:49] 2026-02-03 03:40:17,912 | INFO     | sum of square deviations: 369281342.5
[2026-02-03 12:40:49] 2026-02-03 03:40:17,913 | INFO     | sum of deviations: 448748146.99999946
[2026-02-03 12:40:49] 2026-02-03 03:40:17,913 | INFO     | mean x: 1770086769.5
[2026-02-03 12:40:49] 2026-02-03 03:40:17,913 | INFO     | mean y: 2503783.3396226414
[2026-02-03 12:40:49] 2026-02-03 03:40:17,913 | INFO     | intersect: -2148493481.95639
[2026-02-03 12:40:49] 2026-02-03 03:40:17,913 | INFO     | chi2: 1.863339926654263
[2026-02-03 12:40:49] 2026-02-03 03:40:17,913 | INFO     | sum of square deviations: 319447850.0
[2026-02-03 12:40:49] 2026-02-03 03:40:17,914 | INFO     | sum of deviations: 562613797.000001
[2026-02-03 12:40:49] 2026-02-03 03:40:17,914 | INFO     | mean x: 1770086617.0
[2026-02-03 12:40:49] 2026-02-03 03:40:17,914 | INFO     | mean y: 2504136.1485148515
[2026-02-03 12:40:49] 2026-02-03 03:40:17,914 | INFO     | intersect: -3114984845.5718393
[2026-02-03 12:40:49] 2026-02-03 03:40:17,914 | INFO     | chi2: 1.8647175906822646
[2026-02-03 12:40:49] 2026-02-03 03:40:17,915 | INFO     | current chi2=1.8647175906822646 (change=-0.07393519605815212 %)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,915 | INFO     | right removable region: 100
[2026-02-03 12:40:49] 2026-02-03 03:40:17,915 | INFO     | sum of square deviations: 319447850.0
[2026-02-03 12:40:49] 2026-02-03 03:40:17,915 | INFO     | sum of deviations: -16810891729.000004
[2026-02-03 12:40:49] 2026-02-03 03:40:17,915 | INFO     | mean x: 1770086922.0
[2026-02-03 12:40:49] 2026-02-03 03:40:17,916 | INFO     | mean y: 2555530.207920792
[2026-02-03 12:40:49] 2026-02-03 03:40:17,916 | INFO     | intersect: 93153095114.87213
[2026-02-03 12:40:49] 2026-02-03 03:40:17,916 | INFO     | chi2: 0.18022585071712333
[2026-02-03 12:40:49] 2026-02-03 03:40:17,916 | INFO     | current chi2=0.18022585071712333 (change=90.32780610026806 %)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,916 | INFO     | sum of square deviations: 274312120.0
[2026-02-03 12:40:49] 2026-02-03 03:40:17,916 | INFO     | sum of deviations: -13158120015.499994
[2026-02-03 12:40:49] 2026-02-03 03:40:17,917 | INFO     | mean x: 1770087074.5
[2026-02-03 12:40:49] 2026-02-03 03:40:17,917 | INFO     | mean y: 2543066.6354166665
[2026-02-03 12:40:49] 2026-02-03 03:40:17,917 | INFO     | intersect: 84909539389.49669
[2026-02-03 12:40:49] 2026-02-03 03:40:17,917 | INFO     | chi2: 0.1678208742914785
[2026-02-03 12:40:49] 2026-02-03 03:40:17,917 | INFO     | current chi2=0.1678208742914785 (change=6.883017267658949 %)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,917 | INFO     | left removable region: 20
[2026-02-03 12:40:49] 2026-02-03 03:40:17,917 | INFO     | sum of square deviations: 158737860.0
[2026-02-03 12:40:49] 2026-02-03 03:40:17,918 | INFO     | sum of deviations: -3095600184.0
[2026-02-03 12:40:49] 2026-02-03 03:40:17,918 | INFO     | mean x: 1770087196.5
[2026-02-03 12:40:49] 2026-02-03 03:40:17,918 | INFO     | mean y: 2504030.0
[2026-02-03 12:40:49] 2026-02-03 03:40:17,918 | INFO     | intersect: 34521567416.52571
[2026-02-03 12:40:49] 2026-02-03 03:40:17,918 | INFO     | chi2: 0.06649943611065737
[2026-02-03 12:40:49] 2026-02-03 03:40:17,918 | INFO     | current memory leak: -19.50 B/s (using 80 data points, chi2=0.07)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | could have reported an average CPU frequency of 3291 MHz (7 samples)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | ..............................
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | . Timing measurements:
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | . get job = 0 s
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | . initial setup = 12 s
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | . payload setup = 8 s
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | . stage-in = 0 s
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | . payload execution = 6446 s
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | . stage-out = 0 s
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | . log creation = 0 s
[2026-02-03 12:40:49] 2026-02-03 03:40:17,919 | INFO     | ..............................
[2026-02-03 12:40:49] 2026-02-03 03:40:17,999 | INFO     | 
[2026-02-03 12:40:49] 2026-02-03 03:40:17,999 | INFO     | job summary report
[2026-02-03 12:40:49] 2026-02-03 03:40:17,999 | INFO     | --------------------------------------------------
[2026-02-03 12:40:49] 2026-02-03 03:40:17,999 | INFO     | PanDA job id: 6996650439
[2026-02-03 12:40:49] 2026-02-03 03:40:17,999 | INFO     | task id: 48317931
[2026-02-03 12:40:49] 2026-02-03 03:40:17,999 | INFO     | errors: (none)
[2026-02-03 12:40:49] 2026-02-03 03:40:17,999 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 12:40:49] 2026-02-03 03:40:17,999 | INFO     | pilot state: finished 
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | transexitcode: 0
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | exeerrorcode: 0
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | exeerrordiag: 
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | exitcode: 0
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | exitmsg: OK
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | cpuconsumptiontime: 36155 s
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | nevents: 400
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | neventsw: 0
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | pid: 3787939
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | pgrp: 3787939
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | corecount: 6
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | event service: False
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | sizes: {0: 2278214, 11: 2278214, 6457: 2305380, 6458: 2314433, 6461: 2314433, 6465: 2314627}
[2026-02-03 12:40:49] 2026-02-03 03:40:18,000 | INFO     | --------------------------------------------------
[2026-02-03 12:40:49] 2026-02-03 03:40:18,001 | INFO     | 
[2026-02-03 12:40:49] 2026-02-03 03:40:18,001 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-02-03 12:40:49] 2026-02-03 03:40:18,017 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,017 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,017 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,019 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 12:40:49] 2026-02-03 03:40:18,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,019 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 12:40:49] 2026-02-03 03:40:18,019 | INFO     | job 6996650439 has completed (purged errors)
[2026-02-03 12:40:49] 2026-02-03 03:40:18,019 | INFO     | overall cleanup function is called
[2026-02-03 12:40:49] 2026-02-03 03:40:19,026 | INFO     | --- collectZombieJob: --- 10, [3787939]
[2026-02-03 12:40:49] 2026-02-03 03:40:19,026 | INFO     | zombie collector waiting for pid 3787939
[2026-02-03 12:40:49] 2026-02-03 03:40:19,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 12:40:49] 2026-02-03 03:40:19,026 | INFO     | collected zombie processes
[2026-02-03 12:40:49] 2026-02-03 03:40:19,026 | INFO     | will attempt to kill all subprocesses of pid=3787939
[2026-02-03 12:40:49] 2026-02-03 03:40:19,116 | INFO     | process IDs to be killed: [3787939] (in reverse order)
[2026-02-03 12:40:49] 2026-02-03 03:40:19,157 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 12:40:49] 2026-02-03 03:40:19,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 12:40:49] 2026-02-03 03:40:19,160 | INFO     | did not find any defunct processes belonging to 3787939
[2026-02-03 12:40:49] 2026-02-03 03:40:19,162 | INFO     | did not find any defunct processes belonging to 3787939
[2026-02-03 12:40:49] 2026-02-03 03:40:19,162 | INFO     | ready for new job
[2026-02-03 12:40:49] 2026-02-03 03:40:19,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 12:40:49] 2026-02-03 03:40:19,163 | INFO     | **************************************
[2026-02-03 12:40:49] 2026-02-03 03:40:19,163 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 12:40:49] 2026-02-03 03:40:19,163 | INFO     | **************************************
[2026-02-03 12:40:49] 2026-02-03 03:40:19,163 | INFO     | 
[2026-02-03 12:40:49] 2026-02-03 03:40:19,164 | INFO     | architecture information:
[2026-02-03 12:40:49] 2026-02-03 03:40:19,164 | INFO     | executing command: cat /etc/os-release
[2026-02-03 12:40:49] 2026-02-03 03:40:19,182 | INFO     | cat /etc/os-release:
[2026-02-03 12:40:49] NAME="CentOS Linux"
[2026-02-03 12:40:49] VERSION="7 (Core)"
[2026-02-03 12:40:49] ID="centos"
[2026-02-03 12:40:49] ID_LIKE="rhel fedora"
[2026-02-03 12:40:49] VERSION_ID="7"
[2026-02-03 12:40:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 12:40:49] ANSI_COLOR="0;31"
[2026-02-03 12:40:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 12:40:49] HOME_URL="https://www.centos.org/"
[2026-02-03 12:40:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 12:40:49] 
[2026-02-03 12:40:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 12:40:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 12:40:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 12:40:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 12:40:49] 
[2026-02-03 12:40:49] 2026-02-03 03:40:19,182 | INFO     | **************************************
[2026-02-03 12:40:49] 2026-02-03 03:40:19,685 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-02-03 12:40:49] 2026-02-03 03:40:19,698 | INFO     | sufficient remaining disk space (93903126528 B)
[2026-02-03 12:40:49] 2026-02-03 03:40:19,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 12:40:49] 2026-02-03 03:40:19,699 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 12:40:49] 2026-02-03 03:40:19,699 | INFO     | update_server=False
[2026-02-03 12:40:49] 2026-02-03 03:40:19,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 12:40:49] 2026-02-03 03:40:19,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:40:49] 2026-02-03 03:40:19,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:40:49] 2026-02-03 03:40:19,700 | INFO     | aborting loop
[2026-02-03 12:40:49] 2026-02-03 03:40:19,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 12:40:49] 2026-02-03 03:40:20,073 | INFO     | all data control threads have been joined
[2026-02-03 12:40:49] 2026-02-03 03:40:20,662 | INFO     | all payload control threads have been joined
[2026-02-03 12:40:49] 2026-02-03 03:40:20,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 12:40:49] 2026-02-03 03:40:20,704 | INFO     | [job] retrieve thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:20,705 | INFO     | [job] job monitor thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:20,705 | INFO     | [job] queue monitor thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:20,761 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:20,876 | INFO     | all job control threads have been joined
[2026-02-03 12:40:49] 2026-02-03 03:40:20,879 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:21,042 | INFO     | [data] copytool_in thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:21,078 | INFO     | [data] control thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:21,563 | INFO     | [payload] validate_post thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:21,667 | INFO     | [payload] control thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:21,734 | INFO     | [data] copytool_out thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:21,881 | INFO     | [job] control thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:21,926 | INFO     | [job] validate thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:21,983 | INFO     | [payload] failed_post thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:22,064 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:24,677 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:30,717 | INFO     | job.realtimelogging is not enabled
[2026-02-03 12:40:49] 2026-02-03 03:40:31,722 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 12:40:49] 2026-02-03 03:40:32,234 | INFO     | [monitor] cgroup control has ended
[2026-02-03 12:40:49] 2026-02-03 03:40:32,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660707850048)>', '<ExcThread(monitor, started 139660340729600)>']
[2026-02-03 12:40:49] 2026-02-03 03:40:37,841 | INFO     | all workflow threads have been joined
[2026-02-03 12:40:49] 2026-02-03 03:40:37,841 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 12:40:49] 2026-02-03 03:40:37,841 | INFO     | traces error code: 0
[2026-02-03 12:40:49] 2026-02-03 03:40:37,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 12:40:49] 2026-02-03 03:40:49,612 | INFO     | PID=3783310 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 12:40:49] 2026-02-03 03:40:49,612 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 12:40:49] 2026-02-03 03:40:49,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 12:40:49] 2026-02-03 03:40:49,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 12:40:49] 2026-02-03 03:40:49,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 12:40:49] 2026-02-03 03:40:49,613 | INFO     | [monitor] control thread has ended
[2026-02-03 12:40:49] 2026-02-03 03:40:49,693 [wrapper] ==== pilot stdout END ====
[2026-02-03 12:40:49] 2026-02-03 03:40:49,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 12:40:49] 2026-02-03 03:40:49,701 [wrapper] pilotpid: 3783310
[2026-02-03 12:40:49] 2026-02-03 03:40:49,703 [wrapper] Pilot exit status: 0
[2026-02-03 12:40:49] 2026-02-03 03:40:49,718 [wrapper] pandaids: 6996650439
[2026-02-03 12:40:49] 2026-02-03 03:40:49,745 [wrapper] cleanup supervisor_pilot 3793091 3783311
[2026-02-03 12:40:49] 2026-02-03 03:40:49,748 [wrapper] Test setup, not cleaning
[2026-02-03 12:40:49] 2026-02-03 03:40:49,753 [wrapper] apfmon messages muted
[2026-02-03 12:40:49] 2026-02-03 03:40:49,758 [wrapper] ==== wrapper stdout END ====
[2026-02-03 12:40:49] 2026-02-03 03:40:49,760 [wrapper] ==== wrapper stderr END ====
[2026-02-03 12:40:49]  *** Error codes and diagnostics ***
[2026-02-03 12:40:49]     "exeErrorCode": 0,
[2026-02-03 12:40:49]     "exeErrorDiag": "",
[2026-02-03 12:40:49]     "pilotErrorCode": 0,
[2026-02-03 12:40:49]     "pilotErrorDiag": "",
[2026-02-03 12:40:49]  *** Listing of results directory ***
[2026-02-03 12:40:49] total 670212
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc    584422 Feb  2 19:55 pilot3.tar.gz
[2026-02-03 12:40:49] -rwx------. 1 boinc boinc     36322 Feb  2 19:59 runpilot2-wrapper.sh
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc      5111 Feb  2 20:01 queuedata.json
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc       100 Feb  3 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 12:40:49] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 10:50 run_atlas
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc       105 Feb  3 10:50 job.xml
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc      9356 Feb  3 10:50 init_data.xml
[2026-02-03 12:40:49] -rw-r--r--. 2 boinc boinc 492244352 Feb  3 10:50 EVNT.48317929._000254.pool.root.1
[2026-02-03 12:40:49] -rw-r--r--. 2 boinc boinc     15845 Feb  3 10:50 start_atlas.sh
[2026-02-03 12:40:49] drwxrwx--x. 2 boinc boinc        68 Feb  3 10:50 shared
[2026-02-03 12:40:49] -rw-r--r--. 2 boinc boinc    597761 Feb  3 10:50 input.tar.gz
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc         0 Feb  3 10:50 boinc_lockfile
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc      2513 Feb  3 10:50 pandaJob.out
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc   1009308 Feb  3 10:52 agis_schedconf.cvmfs.json
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc   1511668 Feb  3 10:52 agis_ddmendpoints.agis.ALL.json
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc       417 Feb  3 10:52 workernode_map.json
[2026-02-03 12:40:49] drwx------. 5 boinc boinc      4096 Feb  3 10:52 pilot3
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc 187606087 Feb  3 12:39 HITS.48317931._013980.pool.root.1
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc      1012 Feb  3 12:40 memory_monitor_summary.json
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc       530 Feb  3 12:40 boinc_task_state.xml
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc    328968 Feb  3 12:40 log.48317931._013980.job.log.tgz.1
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc        95 Feb  3 12:40 pilot_heartbeat.json
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc      6291 Feb  3 12:40 heartbeat.json
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc      8192 Feb  3 12:40 boinc_mmap_file
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc        27 Feb  3 12:40 wrapper_checkpoint.txt
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc       747 Feb  3 12:40 pilotlog.txt
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc    929466 Feb  3 12:40 log.48317931._013980.job.log.1
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc       357 Feb  3 12:40 output.list
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc       620 Feb  3 12:40 runtime_log
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc   1280000 Feb  3 12:40 result.tar.gz
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc       642 Feb  3 12:40 zx3KDmCp668nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVhSKDmJufa9m.diag
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc      8774 Feb  3 12:40 runtime_log.err
[2026-02-03 12:40:49] -rw-r--r--. 1 boinc boinc     21039 Feb  3 12:40 stderr.txt
[2026-02-03 12:40:49] HITS file was successfully produced:
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc 187606087 Feb  3 12:39 shared/HITS.pool.root.1
[2026-02-03 12:40:49]  *** Contents of shared directory: ***
[2026-02-03 12:40:49] total 665772
[2026-02-03 12:40:49] -rw-r--r--. 2 boinc boinc 492244352 Feb  3 10:50 ATLAS.root_0
[2026-02-03 12:40:49] -rw-r--r--. 2 boinc boinc     15845 Feb  3 10:50 start_atlas.sh
[2026-02-03 12:40:49] -rw-r--r--. 2 boinc boinc    597761 Feb  3 10:50 input.tar.gz
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc 187606087 Feb  3 12:39 HITS.pool.root.1
[2026-02-03 12:40:49] -rw-------. 1 boinc boinc   1280000 Feb  3 12:40 result.tar.gz
12:40:51 (3778936): run_atlas exited; CPU time 36217.838613
12:40:51 (3778936): called boinc_finish(0)

</stderr_txt>
]]>

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