Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:08:22 (2001870): wrapper (7.7.26015): starting
18:08:22 (2001870): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 18:08:22] Arguments: --nthreads 12
[2026-02-02 18:08:22] Threads: 12
[2026-02-02 18:08:22] Checking for CVMFS
[2026-02-02 18:08:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 18:08:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 18:08:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 18:08:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 18:08:23] 2.11.0.0 921820 5577 94284 155796 0 188 4416750 6144001 11990 130560 0 55162719 99.999 206033 163 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-02 18:08:23] CVMFS is ok
[2026-02-02 18:08:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 18:08:23] Checking for apptainer binary...
[2026-02-02 18:08:23] apptainer is not installed, using version from CVMFS
[2026-02-02 18:08:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 18:08:23] radiat0r
[2026-02-02 18:08:23] apptainer works
[2026-02-02 18:08:23] Set ATHENA_PROC_NUMBER=12
[2026-02-02 18:08:23] Set ATHENA_CORE_NUMBER=12
[2026-02-02 18:08:23] Starting ATLAS job with PandaID=6991530572
[2026-02-02 18:08:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 19:02:14]  *** The last 200 lines of the pilot log: ***
[2026-02-02 19:02:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 19:02:14]  is_altstaged=None
[2026-02-02 19:02:14]  is_tar=False
[2026-02-02 19:02:14]  lfn=log.48317892._001745.job.log.tgz.1
[2026-02-02 19:02:14]  mtime=0
[2026-02-02 19:02:14]  protocol_id=None
[2026-02-02 19:02:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 19:02:14]  replicas=None
[2026-02-02 19:02:14]  scope=mc23_13p6TeV
[2026-02-02 19:02:14]  status=None
[2026-02-02 19:02:14]  status_code=0
[2026-02-02 19:02:14]  storage_token=
[2026-02-02 19:02:14]  surl=/var/lib/boinc/slots/17/PanDA_Pilot-6991530572/log.48317892._001745.job.log.tgz.1
[2026-02-02 19:02:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/93/log.48317892._001745.job.log.tgz.1
[2026-02-02 19:02:14]  workdir=None
[2026-02-02 19:02:14] ]
[2026-02-02 19:02:14] 2026-02-02 19:01:36,457 | INFO     | transferring file log.48317892._001745.job.log.tgz.1 from /var/lib/boinc/slots/17/PanDA_Pilot-6991530572/log.48317892._001745.job.log.tgz.1 to /var/lib/boinc/slots
[2026-02-02 19:02:14] 2026-02-02 19:01:36,458 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/17/PanDA_Pilot-6991530572/log.48317892._001745.job.log.tgz.1 /var/lib/boinc/slots/17/log.48317892._001745.j
[2026-02-02 19:02:14] 2026-02-02 19:01:36,482 | INFO     | adding to output.list: log.48317892._001745.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/93/log.48317892._001745.job.log.tg
[2026-02-02 19:02:14] 2026-02-02 19:01:36,483 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 19:02:14] 2026-02-02 19:01:36,484 | INFO     | summary of transferred files:
[2026-02-02 19:02:14] 2026-02-02 19:01:36,484 | INFO     |  -- lfn=log.48317892._001745.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 19:02:14] 2026-02-02 19:01:36,484 | INFO     | stage-out finished correctly
[2026-02-02 19:02:14] 2026-02-02 19:01:37,587 | INFO     | time since job start (3172s) is within the limit (349056.0s)
[2026-02-02 19:02:14] 2026-02-02 19:01:37,750 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 19:02:14] 2026-02-02 19:01:38,442 | WARNING  | process 2012233 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 19:02:14] 2026-02-02 19:01:38,442 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6991530572/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,271 | INFO     | number of running child processes to parent process 2012233: 1
[2026-02-02 19:02:14] 2026-02-02 19:01:39,272 | INFO     | maximum number of monitored processes: 6
[2026-02-02 19:02:14] 2026-02-02 19:01:39,592 | INFO     | time since job start (3174s) is within the limit (349056.0s)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,717 | INFO     | job 6991530572 has state=finished
[2026-02-02 19:02:14] 2026-02-02 19:01:39,718 | INFO     | preparing for final server update for job 6991530572 in state='finished'
[2026-02-02 19:02:14] 2026-02-02 19:01:39,718 | INFO     | reading metadata from: /var/lib/boinc/slots/17/PanDA_Pilot-6991530572/jobReport.json
[2026-02-02 19:02:14] 2026-02-02 19:01:39,721 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/17/workernode_map.json
[2026-02-02 19:02:14] 2026-02-02 19:01:39,721 | INFO     | this job has now completed (state=finished)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,721 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,721 | INFO     | log transfer has been attempted: DONE
[2026-02-02 19:02:14] 2026-02-02 19:01:39,722 | INFO     | job 6991530572 has finished - writing final server update
[2026-02-02 19:02:14] 2026-02-02 19:01:39,722 | INFO     | total number of processed events: 400 (read)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,797 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6991530572/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,797 | INFO     | extracted standard info from prmon json
[2026-02-02 19:02:14] 2026-02-02 19:01:39,798 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 19:02:14] 2026-02-02 19:01:39,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 19:02:14] 2026-02-02 19:01:39,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 19:02:14] 2026-02-02 19:01:39,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 19:02:14] 2026-02-02 19:01:39,800 | INFO     | fitting pss+swap vs Time
[2026-02-02 19:02:14] 2026-02-02 19:01:39,800 | INFO     | sum of square deviations: 28242390.0
[2026-02-02 19:02:14] 2026-02-02 19:01:39,800 | INFO     | sum of deviations: 137995053.99999994
[2026-02-02 19:02:14] 2026-02-02 19:01:39,800 | INFO     | mean x: 1770057398.0
[2026-02-02 19:02:14] 2026-02-02 19:01:39,800 | INFO     | mean y: 2662493.1333333333
[2026-02-02 19:02:14] 2026-02-02 19:01:39,800 | INFO     | intersect: -8646009457.79254
[2026-02-02 19:02:14] 2026-02-02 19:01:39,801 | INFO     | chi2: 0.00371005014868655
[2026-02-02 19:02:14] 2026-02-02 19:01:39,801 | INFO     | current memory leak: 4.89 B/s (using 45 data points, chi2=0.00)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,801 | INFO     | could have reported an average CPU frequency of 2398 MHz (5 samples)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,801 | INFO     | ..............................
[2026-02-02 19:02:14] 2026-02-02 19:01:39,801 | INFO     | . Timing measurements:
[2026-02-02 19:02:14] 2026-02-02 19:01:39,801 | INFO     | . get job = 0 s
[2026-02-02 19:02:14] 2026-02-02 19:01:39,801 | INFO     | . initial setup = 10 s
[2026-02-02 19:02:14] 2026-02-02 19:01:39,802 | INFO     | . payload setup = 7 s
[2026-02-02 19:02:14] 2026-02-02 19:01:39,802 | INFO     | . stage-in = 0 s
[2026-02-02 19:02:14] 2026-02-02 19:01:39,802 | INFO     | . payload execution = 3147 s
[2026-02-02 19:02:14] 2026-02-02 19:01:39,802 | INFO     | . stage-out = 0 s
[2026-02-02 19:02:14] 2026-02-02 19:01:39,802 | INFO     | . log creation = 0 s
[2026-02-02 19:02:14] 2026-02-02 19:01:39,802 | INFO     | ..............................
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | 
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | job summary report
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | --------------------------------------------------
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | PanDA job id: 6991530572
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | task id: 48317892
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | errors: (none)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | pilot state: finished 
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | transexitcode: 0
[2026-02-02 19:02:14] 2026-02-02 19:01:39,902 | INFO     | exeerrorcode: 0
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | exeerrordiag: 
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | exitcode: 0
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | exitmsg: OK
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | cpuconsumptiontime: 33346 s
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | nevents: 400
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | neventsw: 0
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | pid: 2012233
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | pgrp: 2012233
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | corecount: 12
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | event service: False
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | sizes: {0: 2277785, 1: 2278246, 11: 2278246, 3159: 2303952, 3160: 2312952, 3161: 2313008, 3164: 2313362}
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | --------------------------------------------------
[2026-02-02 19:02:14] 2026-02-02 19:01:39,903 | INFO     | 
[2026-02-02 19:02:14] 2026-02-02 19:01:39,904 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-02-02 19:02:14] 2026-02-02 19:01:39,938 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,940 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,940 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 19:02:14] 2026-02-02 19:01:39,940 | INFO     | job 6991530572 has completed (purged errors)
[2026-02-02 19:02:14] 2026-02-02 19:01:39,941 | INFO     | overall cleanup function is called
[2026-02-02 19:02:14] 2026-02-02 19:01:40,950 | INFO     | --- collectZombieJob: --- 10, [2012233]
[2026-02-02 19:02:14] 2026-02-02 19:01:40,951 | INFO     | zombie collector waiting for pid 2012233
[2026-02-02 19:02:14] 2026-02-02 19:01:40,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 19:02:14] 2026-02-02 19:01:40,951 | INFO     | collected zombie processes
[2026-02-02 19:02:14] 2026-02-02 19:01:40,951 | INFO     | will attempt to kill all subprocesses of pid=2012233
[2026-02-02 19:02:14] 2026-02-02 19:01:41,813 | INFO     | process IDs to be killed: [2012233] (in reverse order)
[2026-02-02 19:02:14] 2026-02-02 19:01:42,088 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 19:02:14] 2026-02-02 19:01:42,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 19:02:14] 2026-02-02 19:01:42,119 | INFO     | did not find any defunct processes belonging to 2012233
[2026-02-02 19:02:14] 2026-02-02 19:01:42,146 | INFO     | did not find any defunct processes belonging to 2012233
[2026-02-02 19:02:14] 2026-02-02 19:01:42,147 | INFO     | ready for new job
[2026-02-02 19:02:14] 2026-02-02 19:01:42,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 19:02:14] 2026-02-02 19:01:42,150 | INFO     | **************************************
[2026-02-02 19:02:14] 2026-02-02 19:01:42,150 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 19:02:14] 2026-02-02 19:01:42,150 | INFO     | **************************************
[2026-02-02 19:02:14] 2026-02-02 19:01:42,150 | INFO     | 
[2026-02-02 19:02:14] 2026-02-02 19:01:42,186 | INFO     | architecture information:
[2026-02-02 19:02:14] 2026-02-02 19:01:42,187 | INFO     | executing command: cat /etc/os-release
[2026-02-02 19:02:14] 2026-02-02 19:01:42,211 | INFO     | cat /etc/os-release:
[2026-02-02 19:02:14] NAME="CentOS Linux"
[2026-02-02 19:02:14] VERSION="7 (Core)"
[2026-02-02 19:02:14] ID="centos"
[2026-02-02 19:02:14] ID_LIKE="rhel fedora"
[2026-02-02 19:02:14] VERSION_ID="7"
[2026-02-02 19:02:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 19:02:14] ANSI_COLOR="0;31"
[2026-02-02 19:02:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 19:02:14] HOME_URL="https://www.centos.org/"
[2026-02-02 19:02:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 19:02:14] 
[2026-02-02 19:02:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 19:02:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 19:02:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 19:02:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 19:02:14] 
[2026-02-02 19:02:14] 2026-02-02 19:01:42,212 | INFO     | **************************************
[2026-02-02 19:02:14] 2026-02-02 19:01:42,715 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-02-02 19:02:14] 2026-02-02 19:01:42,744 | INFO     | sufficient remaining disk space (1699286614016 B)
[2026-02-02 19:02:14] 2026-02-02 19:01:42,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 19:02:14] 2026-02-02 19:01:42,744 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 19:02:14] 2026-02-02 19:01:42,744 | INFO     | update_server=False
[2026-02-02 19:02:14] 2026-02-02 19:01:42,744 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 19:02:14] 2026-02-02 19:01:42,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 19:02:14] 2026-02-02 19:01:42,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 19:02:14] 2026-02-02 19:01:42,780 | INFO     | aborting loop
[2026-02-02 19:02:14] 2026-02-02 19:01:43,750 | INFO     | [job] retrieve thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:43,768 | INFO     | all data control threads have been joined
[2026-02-02 19:02:14] 2026-02-02 19:01:43,779 | INFO     | all job control threads have been joined
[2026-02-02 19:02:14] 2026-02-02 19:01:43,783 | INFO     | [data] copytool_in thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:43,784 | INFO     | [job] job monitor thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:43,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 19:02:14] 2026-02-02 19:01:44,024 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:44,040 | INFO     | all payload control threads have been joined
[2026-02-02 19:02:14] 2026-02-02 19:01:44,612 | INFO     | [job] validate thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:44,621 | INFO     | [payload] validate_post thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:44,751 | INFO     | [data] copytool_out thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:44,768 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:44,772 | INFO     | [data] control thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:44,784 | INFO     | [job] control thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:44,808 | INFO     | [payload] failed_post thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:44,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 19:02:14] 2026-02-02 19:01:45,044 | INFO     | [payload] control thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:45,053 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:45,918 | INFO     | [job] queue monitor thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:47,862 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:49,828 | INFO     | [monitor] cgroup control has ended
[2026-02-02 19:02:14] 2026-02-02 19:01:53,644 | INFO     | job.realtimelogging is not enabled
[2026-02-02 19:02:14] 2026-02-02 19:01:54,645 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 19:02:14] 2026-02-02 19:01:54,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140970215232)>', '<ExcThread(monitor, started 140140513044224)>']
[2026-02-02 19:02:14] 2026-02-02 19:01:59,968 | INFO     | all workflow threads have been joined
[2026-02-02 19:02:14] 2026-02-02 19:01:59,968 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 19:02:14] 2026-02-02 19:01:59,968 | INFO     | traces error code: 0
[2026-02-02 19:02:14] 2026-02-02 19:01:59,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 19:02:14] 2026-02-02 19:02:13,628 | INFO     | PID=2006646 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-02 19:02:14] 2026-02-02 19:02:13,628 | INFO     | .. there are 14 such processes running
[2026-02-02 19:02:14] 2026-02-02 19:02:13,629 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 19:02:14] 2026-02-02 19:02:13,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 19:02:14] 2026-02-02 19:02:13,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 19:02:14] 2026-02-02 19:02:13,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 19:02:14] 2026-02-02 19:02:13,629 | INFO     | [monitor] control thread has ended
[2026-02-02 19:02:14] 2026-02-02 19:02:13,801 [wrapper] ==== pilot stdout END ====
[2026-02-02 19:02:14] 2026-02-02 19:02:13,805 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 19:02:14] 2026-02-02 19:02:13,807 [wrapper] pilotpid: 2006646
[2026-02-02 19:02:14] 2026-02-02 19:02:13,810 [wrapper] Pilot exit status: 0
[2026-02-02 19:02:14] 2026-02-02 19:02:13,826 [wrapper] pandaids: 6991530572
[2026-02-02 19:02:14] 2026-02-02 19:02:14,017 [wrapper] cleanup supervisor_pilot 2194731 2006647
[2026-02-02 19:02:14] 2026-02-02 19:02:14,022 [wrapper] Test setup, not cleaning
[2026-02-02 19:02:14] 2026-02-02 19:02:14,026 [wrapper] apfmon messages muted
[2026-02-02 19:02:14] 2026-02-02 19:02:14,029 [wrapper] ==== wrapper stdout END ====
[2026-02-02 19:02:14] 2026-02-02 19:02:14,033 [wrapper] ==== wrapper stderr END ====
[2026-02-02 19:02:14]  *** Error codes and diagnostics ***
[2026-02-02 19:02:14]     "exeErrorCode": 0,
[2026-02-02 19:02:14]     "exeErrorDiag": "",
[2026-02-02 19:02:14]     "pilotErrorCode": 0,
[2026-02-02 19:02:14]     "pilotErrorDiag": "",
[2026-02-02 19:02:14]  *** Listing of results directory ***
[2026-02-02 19:02:14] total 676420
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc    584422 Jan 29 10:47 pilot3.tar.gz
[2026-02-02 19:02:14] -rwx------ 1 boinc boinc     36322 Jan 29 10:48 runpilot2-wrapper.sh
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc      5111 Jan 29 10:50 queuedata.json
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc       100 Feb  2 18:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 19:02:14] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 18:08 run_atlas
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc       105 Feb  2 18:08 job.xml
[2026-02-02 19:02:14] -rw-r--r-- 2 boinc boinc     15845 Feb  2 18:08 start_atlas.sh
[2026-02-02 19:02:14] drwxrwx--x 2 boinc boinc      4096 Feb  2 18:08 shared
[2026-02-02 19:02:14] -rw-r--r-- 2 boinc boinc    597750 Feb  2 18:08 input.tar.gz
[2026-02-02 19:02:14] -rw-r--r-- 2 boinc boinc 498060526 Feb  2 18:08 EVNT.48317889._000035.pool.root.1
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc         0 Feb  2 18:08 boinc_setup_complete
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc      9417 Feb  2 18:08 init_data.xml
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc         0 Feb  2 18:08 boinc_lockfile
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc      2519 Feb  2 18:08 pandaJob.out
[2026-02-02 19:02:14] -rw------- 1 boinc boinc   1009774 Feb  2 18:08 agis_schedconf.cvmfs.json
[2026-02-02 19:02:14] -rw------- 1 boinc boinc   1511668 Feb  2 18:08 agis_ddmendpoints.agis.ALL.json
[2026-02-02 19:02:14] -rw------- 1 boinc boinc       421 Feb  2 18:08 workernode_map.json
[2026-02-02 19:02:14] drwx------ 5 boinc boinc      4096 Feb  2 18:08 pilot3
[2026-02-02 19:02:14] -rw------- 1 boinc boinc 188985830 Feb  2 19:01 HITS.48317892._001745.pool.root.1
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc       530 Feb  2 19:01 boinc_task_state.xml
[2026-02-02 19:02:14] -rw------- 1 boinc boinc        95 Feb  2 19:01 pilot_heartbeat.json
[2026-02-02 19:02:14] -rw------- 1 boinc boinc      1025 Feb  2 19:01 memory_monitor_summary.json
[2026-02-02 19:02:14] -rw------- 1 boinc boinc    360462 Feb  2 19:01 log.48317892._001745.job.log.tgz.1
[2026-02-02 19:02:14] -rw------- 1 boinc boinc      6282 Feb  2 19:01 heartbeat.json
[2026-02-02 19:02:14] -rw------- 1 boinc boinc       824 Feb  2 19:02 pilotlog.txt
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc      8192 Feb  2 19:02 boinc_mmap_file
[2026-02-02 19:02:14] -rw------- 1 boinc boinc    470410 Feb  2 19:02 log.48317892._001745.job.log.1
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc        27 Feb  2 19:02 wrapper_checkpoint.txt
[2026-02-02 19:02:14] -rw------- 1 boinc boinc       357 Feb  2 19:02 output.list
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc       620 Feb  2 19:02 runtime_log
[2026-02-02 19:02:14] -rw------- 1 boinc boinc    849920 Feb  2 19:02 result.tar.gz
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc      8787 Feb  2 19:02 runtime_log.err
[2026-02-02 19:02:14] -rw------- 1 boinc boinc       643 Feb  2 19:02 RQnKDmmke58n9Rq4apOajLDm4fhM0noT9bVooX4SDmbTIKDm7FMaNn.diag
[2026-02-02 19:02:14] -rw-r--r-- 1 boinc boinc     21159 Feb  2 19:02 stderr.txt
[2026-02-02 19:02:14] HITS file was successfully produced:
[2026-02-02 19:02:14] -rw------- 1 boinc boinc 188985830 Feb  2 19:01 shared/HITS.pool.root.1
[2026-02-02 19:02:14]  *** Contents of shared directory: ***
[2026-02-02 19:02:14] total 672388
[2026-02-02 19:02:14] -rw-r--r-- 2 boinc boinc     15845 Feb  2 18:08 start_atlas.sh
[2026-02-02 19:02:14] -rw-r--r-- 2 boinc boinc    597750 Feb  2 18:08 input.tar.gz
[2026-02-02 19:02:14] -rw-r--r-- 2 boinc boinc 498060526 Feb  2 18:08 ATLAS.root_0
[2026-02-02 19:02:14] -rw------- 1 boinc boinc 188985830 Feb  2 19:01 HITS.pool.root.1
[2026-02-02 19:02:14] -rw------- 1 boinc boinc    849920 Feb  2 19:02 result.tar.gz
19:02:16 (2001870): run_atlas exited; CPU time 33553.420134
19:02:16 (2001870): called boinc_finish(0)

</stderr_txt>
]]>

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