Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:46:39 (4082937): wrapper (7.7.26015): starting
11:46:39 (4082937): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 11:46:39] Arguments: --nthreads 8
[2026-02-02 11:46:39] Threads: 8
[2026-02-02 11:46:39] Checking for CVMFS
[2026-02-02 11:46:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 11:46:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 11:46:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 11:46:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 11:46:41] 2.13.3.0 6968 57696 168384 155794 2 563 22239620 40960001 18897 16776704 0 150738132 99.649 142938576 36719 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 11:46:41] CVMFS is ok
[2026-02-02 11:46:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 11:46:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 11:46:41] Further information can be found at the LHC@home message board.
[2026-02-02 11:46:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 11:46:41] Checking for apptainer binary...
[2026-02-02 11:46:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 11:46:41] Running /usr/bin/apptainer --version
[2026-02-02 11:46:41] apptainer version 1.4.5-2.el9
[2026-02-02 11:46:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 11:46:42] c-212-5.aglt2.org
[2026-02-02 11:46:42] apptainer works
[2026-02-02 11:46:42] Set ATHENA_PROC_NUMBER=8
[2026-02-02 11:46:42] Set ATHENA_CORE_NUMBER=8
[2026-02-02 11:46:42] Starting ATLAS job with PandaID=6983466423
[2026-02-02 11:46:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 13:42:04]  *** The last 200 lines of the pilot log: ***
[2026-02-02 13:42:04] 2026-02-02 18:41:04,517 | INFO     | total number of processed events: 400 (read)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,530 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983466423/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,530 | INFO     | extracted standard info from prmon json
[2026-02-02 13:42:04] 2026-02-02 18:41:04,531 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 13:42:04] 2026-02-02 18:41:04,531 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 13:42:04] 2026-02-02 18:41:04,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 13:42:04] 2026-02-02 18:41:04,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 13:42:04] 2026-02-02 18:41:04,532 | INFO     | fitting pss+swap vs Time
[2026-02-02 13:42:04] 2026-02-02 18:41:04,533 | INFO     | sum of square deviations: 424054189.96396345
[2026-02-02 13:42:04] 2026-02-02 18:41:04,533 | INFO     | sum of deviations: 5922833676.738735
[2026-02-02 13:42:04] 2026-02-02 18:41:04,533 | INFO     | mean x: 1770054268.018018
[2026-02-02 13:42:04] 2026-02-02 18:41:04,533 | INFO     | mean y: 2541692.6306306305
[2026-02-02 13:42:04] 2026-02-02 18:41:04,533 | INFO     | intersect: -24720093471.434525
[2026-02-02 13:42:04] 2026-02-02 18:41:04,534 | INFO     | chi2: 1.468249053064538
[2026-02-02 13:42:04] 2026-02-02 18:41:04,534 | INFO     | sum of square deviations: 369290982.4622636
[2026-02-02 13:42:04] 2026-02-02 18:41:04,534 | INFO     | sum of deviations: 6027614290.632076
[2026-02-02 13:42:04] 2026-02-02 18:41:04,534 | INFO     | mean x: 1770054115.518868
[2026-02-02 13:42:04] 2026-02-02 18:41:04,534 | INFO     | mean y: 2541982.933962264
[2026-02-02 13:42:04] 2026-02-02 18:41:04,534 | INFO     | intersect: -28888505967.265835
[2026-02-02 13:42:04] 2026-02-02 18:41:04,535 | INFO     | chi2: 1.4709660793434247
[2026-02-02 13:42:04] 2026-02-02 18:41:04,535 | INFO     | current chi2=1.4709660793434247 (change=-0.18505213902339726 %)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,535 | INFO     | right removable region: 105
[2026-02-02 13:42:04] 2026-02-02 18:41:04,535 | INFO     | sum of square deviations: 369289762.4622636
[2026-02-02 13:42:04] 2026-02-02 18:41:04,535 | INFO     | sum of deviations: -10364805593.462263
[2026-02-02 13:42:04] 2026-02-02 18:41:04,535 | INFO     | mean x: 1770054420.518868
[2026-02-02 13:42:04] 2026-02-02 18:41:04,535 | INFO     | mean y: 2586080.4811320757
[2026-02-02 13:42:04] 2026-02-02 18:41:04,535 | INFO     | intersect: 49682463031.85291
[2026-02-02 13:42:04] 2026-02-02 18:41:04,536 | INFO     | chi2: 0.037479723097850554
[2026-02-02 13:42:04] 2026-02-02 18:41:04,536 | INFO     | current chi2=0.037479723097850554 (change=97.44731842192422 %)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,536 | INFO     | sum of square deviations: 319455659.96039516
[2026-02-02 13:42:04] 2026-02-02 18:41:04,536 | INFO     | sum of deviations: -9939267231.980198
[2026-02-02 13:42:04] 2026-02-02 18:41:04,536 | INFO     | mean x: 1770054573.019802
[2026-02-02 13:42:04] 2026-02-02 18:41:04,536 | INFO     | mean y: 2584670.99009901
[2026-02-02 13:42:04] 2026-02-02 18:41:04,536 | INFO     | intersect: 55074532429.291
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | chi2: 0.02408231498804106
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | current chi2=0.02408231498804106 (change=35.74574997481193 %)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | sum of square deviations: 274319319.9583326
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | sum of deviations: -8887730851.395834
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | mean x: 1770054725.5208333
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | mean y: 2581107.9479166665
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | intersect: 57350966176.34212
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | chi2: 0.023606335864770137
[2026-02-02 13:42:04] 2026-02-02 18:41:04,537 | INFO     | current chi2=0.023606335864770137 (change=1.97646747626749 %)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,538 | INFO     | left removable region: 30
[2026-02-02 13:42:04] 2026-02-02 18:41:04,538 | INFO     | sum of square deviations: 130799251.9466669
[2026-02-02 13:42:04] 2026-02-02 18:41:04,538 | INFO     | sum of deviations: -4766804556.746667
[2026-02-02 13:42:04] 2026-02-02 18:41:04,538 | INFO     | mean x: 1770055000.0266666
[2026-02-02 13:42:04] 2026-02-02 18:41:04,538 | INFO     | mean y: 2567893.3733333335
[2026-02-02 13:42:04] 2026-02-02 18:41:04,538 | INFO     | intersect: 64509865253.60373
[2026-02-02 13:42:04] 2026-02-02 18:41:04,538 | INFO     | chi2: 0.020792720485394066
[2026-02-02 13:42:04] 2026-02-02 18:41:04,538 | INFO     | current memory leak: -36.44 B/s (using 75 data points, chi2=0.02)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | could have reported an average CPU frequency of 3150 MHz (7 samples)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | ..............................
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | . Timing measurements:
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | . get job = 0 s
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | . initial setup = 22 s
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | . payload setup = 21 s
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | . stage-in = 0 s
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | . payload execution = 6756 s
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | . stage-out = 1 s
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | . log creation = 0 s
[2026-02-02 13:42:04] 2026-02-02 18:41:04,539 | INFO     | ..............................
[2026-02-02 13:42:04] 2026-02-02 18:41:04,963 | INFO     | 
[2026-02-02 13:42:04] 2026-02-02 18:41:04,963 | INFO     | job summary report
[2026-02-02 13:42:04] 2026-02-02 18:41:04,963 | INFO     | --------------------------------------------------
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | PanDA job id: 6983466423
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | task id: 48329469
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | errors: (none)
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | pilot state: finished 
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | transexitcode: 0
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | exeerrorcode: 0
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | exeerrordiag: 
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | exitcode: 0
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | exitmsg: OK
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | cpuconsumptiontime: 40136 s
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | nevents: 400
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | neventsw: 0
[2026-02-02 13:42:04] 2026-02-02 18:41:04,964 | INFO     | pid: 4101481
[2026-02-02 13:42:04] 2026-02-02 18:41:04,965 | INFO     | pgrp: 4101481
[2026-02-02 13:42:04] 2026-02-02 18:41:04,965 | INFO     | corecount: 8
[2026-02-02 13:42:04] 2026-02-02 18:41:04,965 | INFO     | event service: False
[2026-02-02 13:42:04] 2026-02-02 18:41:04,965 | INFO     | sizes: {0: 2278330, 1: 2278390, 11: 2278418, 6782: 2305793, 6783: 2314791, 6787: 2315169}
[2026-02-02 13:42:04] 2026-02-02 18:41:04,965 | INFO     | --------------------------------------------------
[2026-02-02 13:42:04] 2026-02-02 18:41:04,965 | INFO     | 
[2026-02-02 13:42:04] 2026-02-02 18:41:04,965 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | job 6983466423 has completed (purged errors)
[2026-02-02 13:42:04] 2026-02-02 18:41:05,036 | INFO     | overall cleanup function is called
[2026-02-02 13:42:04] 2026-02-02 18:41:06,044 | INFO     | --- collectZombieJob: --- 10, [4101481]
[2026-02-02 13:42:04] 2026-02-02 18:41:06,044 | INFO     | zombie collector waiting for pid 4101481
[2026-02-02 13:42:04] 2026-02-02 18:41:06,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 13:42:04] 2026-02-02 18:41:06,045 | INFO     | collected zombie processes
[2026-02-02 13:42:04] 2026-02-02 18:41:06,045 | INFO     | will attempt to kill all subprocesses of pid=4101481
[2026-02-02 13:42:04] 2026-02-02 18:41:06,506 | INFO     | process IDs to be killed: [4101481] (in reverse order)
[2026-02-02 13:42:04] 2026-02-02 18:41:06,634 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 13:42:04] 2026-02-02 18:41:06,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 13:42:04] 2026-02-02 18:41:06,652 | INFO     | did not find any defunct processes belonging to 4101481
[2026-02-02 13:42:04] 2026-02-02 18:41:06,669 | INFO     | did not find any defunct processes belonging to 4101481
[2026-02-02 13:42:04] 2026-02-02 18:41:06,669 | INFO     | ready for new job
[2026-02-02 13:42:04] 2026-02-02 18:41:06,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 13:42:04] 2026-02-02 18:41:06,671 | INFO     | **************************************
[2026-02-02 13:42:04] 2026-02-02 18:41:06,671 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 13:42:04] 2026-02-02 18:41:06,671 | INFO     | **************************************
[2026-02-02 13:42:04] 2026-02-02 18:41:06,671 | INFO     | 
[2026-02-02 13:42:04] 2026-02-02 18:41:06,676 | INFO     | architecture information:
[2026-02-02 13:42:04] 2026-02-02 18:41:06,676 | INFO     | executing command: cat /etc/os-release
[2026-02-02 13:42:04] 2026-02-02 18:41:06,692 | INFO     | cat /etc/os-release:
[2026-02-02 13:42:04] NAME="CentOS Linux"
[2026-02-02 13:42:04] VERSION="7 (Core)"
[2026-02-02 13:42:04] ID="centos"
[2026-02-02 13:42:04] ID_LIKE="rhel fedora"
[2026-02-02 13:42:04] VERSION_ID="7"
[2026-02-02 13:42:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 13:42:04] ANSI_COLOR="0;31"
[2026-02-02 13:42:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 13:42:04] HOME_URL="https://www.centos.org/"
[2026-02-02 13:42:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 13:42:04] 
[2026-02-02 13:42:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 13:42:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 13:42:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 13:42:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 13:42:04] 
[2026-02-02 13:42:04] 2026-02-02 18:41:06,692 | INFO     | **************************************
[2026-02-02 13:42:04] 2026-02-02 18:41:07,197 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 13:42:04] 2026-02-02 18:41:07,228 | INFO     | sufficient remaining disk space (124413542400 B)
[2026-02-02 13:42:04] 2026-02-02 18:41:07,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 13:42:04] 2026-02-02 18:41:07,229 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 13:42:04] 2026-02-02 18:41:07,229 | INFO     | update_server=False
[2026-02-02 13:42:04] 2026-02-02 18:41:07,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 13:42:04] 2026-02-02 18:41:07,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 13:42:04] 2026-02-02 18:41:07,373 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 13:42:04] 2026-02-02 18:41:07,374 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 13:42:04] 2026-02-02 18:41:07,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:42:04] 2026-02-02 18:41:07,374 | INFO     | will abort loop
[2026-02-02 13:42:04] 2026-02-02 18:41:07,376 | INFO     | all data control threads have been joined
[2026-02-02 13:42:04] 2026-02-02 18:41:07,823 | INFO     | all job control threads have been joined
[2026-02-02 13:42:04] 2026-02-02 18:41:07,976 | INFO     | all payload control threads have been joined
[2026-02-02 13:42:04] 2026-02-02 18:41:08,234 | INFO     | [job] retrieve thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,349 | INFO     | [job] validate thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,379 | INFO     | [job] job monitor thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,382 | INFO     | [data] control thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,510 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,550 | INFO     | [data] copytool_in thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,648 | INFO     | [payload] failed_post thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,835 | INFO     | [job] control thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,921 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:08,981 | INFO     | [payload] control thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:09,112 | INFO     | [payload] validate_post thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:09,157 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:09,235 | INFO     | [data] copytool_out thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:09,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:42:04] 2026-02-02 18:41:10,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 13:42:04] 2026-02-02 18:41:10,639 | INFO     | [job] queue monitor thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:14,478 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:17,947 | INFO     | job.realtimelogging is not enabled
[2026-02-02 13:42:04] 2026-02-02 18:41:18,952 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 13:42:04] 2026-02-02 18:41:37,085 | INFO     | PID=4088732 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 13:42:04] 2026-02-02 18:41:37,085 | INFO     | .. there are 18 such processes running
[2026-02-02 13:42:04] 2026-02-02 18:41:37,086 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 13:42:04] 2026-02-02 18:41:37,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 13:42:04] 2026-02-02 18:41:37,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 13:42:04] 2026-02-02 18:41:57,541 | INFO     | [monitor] cgroup control has ended
[2026-02-02 13:42:04] 2026-02-02 18:41:59,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677059340096)>', '<ExcThread(monitor, started 139676681754368)>']
[2026-02-02 13:42:04] 2026-02-02 18:42:00,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 13:42:04] 2026-02-02 18:42:00,222 | INFO     | [monitor] control thread has ended
[2026-02-02 13:42:04] 2026-02-02 18:42:04,403 | INFO     | all workflow threads have been joined
[2026-02-02 13:42:04] 2026-02-02 18:42:04,403 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 13:42:04] 2026-02-02 18:42:04,404 | INFO     | traces error code: 0
[2026-02-02 13:42:04] 2026-02-02 18:42:04,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 13:42:04] 2026-02-02 18:42:04,513 [wrapper] ==== pilot stdout END ====
[2026-02-02 13:42:04] 2026-02-02 18:42:04,520 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 13:42:04] 2026-02-02 18:42:04,544 [wrapper] pilotpid: 4088732
[2026-02-02 13:42:04] 2026-02-02 18:42:04,552 [wrapper] Pilot exit status: 0
[2026-02-02 13:42:04] 2026-02-02 18:42:04,565 [wrapper] pandaids: 6983466423
[2026-02-02 13:42:04] 2026-02-02 18:42:04,664 [wrapper] cleanup supervisor_pilot  154966 4088733
[2026-02-02 13:42:04] 2026-02-02 18:42:04,667 [wrapper] Test setup, not cleaning
[2026-02-02 13:42:04] 2026-02-02 18:42:04,670 [wrapper] apfmon messages muted
[2026-02-02 13:42:04] 2026-02-02 18:42:04,672 [wrapper] ==== wrapper stdout END ====
[2026-02-02 13:42:04] 2026-02-02 18:42:04,674 [wrapper] ==== wrapper stderr END ====
[2026-02-02 13:42:04]  *** Error codes and diagnostics ***
[2026-02-02 13:42:04]     "exeErrorCode": 0,
[2026-02-02 13:42:04]     "exeErrorDiag": "",
[2026-02-02 13:42:04]     "pilotErrorCode": 0,
[2026-02-02 13:42:04]     "pilotErrorDiag": "",
[2026-02-02 13:42:04]  *** Listing of results directory ***
[2026-02-02 13:42:04] total 441828
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 17:54 pilot3.tar.gz
[2026-02-02 13:42:04] -rwx------. 1 boincer umatlas     36322 Jan 25 17:54 runpilot2-wrapper.sh
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 17:56 queuedata.json
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas       100 Feb  2 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 13:42:04] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 11:46 run_atlas
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas       105 Feb  2 11:46 job.xml
[2026-02-02 13:42:04] -rw-r--r--. 2 boincer umatlas 265206875 Feb  2 11:46 EVNT.48329467._000002.pool.root.1
[2026-02-02 13:42:04] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 11:46 start_atlas.sh
[2026-02-02 13:42:04] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 11:46 shared
[2026-02-02 13:42:04] -rw-r--r--. 2 boincer umatlas    597766 Feb  2 11:46 input.tar.gz
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas         0 Feb  2 11:46 boinc_lockfile
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas      2611 Feb  2 11:46 pandaJob.out
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas        57 Feb  2 11:46 setup.sh.local
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas   1009772 Feb  2 11:47 agis_schedconf.cvmfs.json
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas   1511668 Feb  2 11:47 agis_ddmendpoints.agis.ALL.json
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas       429 Feb  2 11:47 workernode_map.json
[2026-02-02 13:42:04] drwx------. 5 boincer umatlas      4096 Feb  2 11:47 pilot3
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas      6957 Feb  2 13:40 init_data.xml
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas 180653146 Feb  2 13:40 HITS.48329469._000042.pool.root.1
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas       529 Feb  2 13:40 boinc_task_state.xml
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas      1033 Feb  2 13:40 memory_monitor_summary.json
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas    362387 Feb  2 13:41 log.48329469._000042.job.log.tgz.1
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas      6318 Feb  2 13:41 heartbeat.json
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas        95 Feb  2 13:41 pilot_heartbeat.json
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 13:42 boinc_mmap_file
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas        27 Feb  2 13:42 wrapper_checkpoint.txt
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas      5079 Feb  2 13:42 pilotlog.txt
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas    950578 Feb  2 13:42 log.48329469._000042.job.log.1
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas       357 Feb  2 13:42 output.list
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas       620 Feb  2 13:42 runtime_log
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas   1331200 Feb  2 13:42 result.tar.gz
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas      9336 Feb  2 13:42 runtime_log.err
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas       652 Feb  2 13:42 MwjLDmbBO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmf01KDm8KzzSo.diag
[2026-02-02 13:42:04] -rw-r--r--. 1 boincer umatlas     21109 Feb  2 13:42 stderr.txt
[2026-02-02 13:42:04] HITS file was successfully produced:
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas 180653146 Feb  2 13:40 shared/HITS.pool.root.1
[2026-02-02 13:42:04]  *** Contents of shared directory: ***
[2026-02-02 13:42:04] total 437320
[2026-02-02 13:42:04] -rw-r--r--. 2 boincer umatlas 265206875 Feb  2 11:46 ATLAS.root_0
[2026-02-02 13:42:04] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 11:46 start_atlas.sh
[2026-02-02 13:42:04] -rw-r--r--. 2 boincer umatlas    597766 Feb  2 11:46 input.tar.gz
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas 180653146 Feb  2 13:40 HITS.pool.root.1
[2026-02-02 13:42:04] -rw-------. 1 boincer umatlas   1331200 Feb  2 13:42 result.tar.gz
13:42:06 (4082937): run_atlas exited; CPU time 40307.921503
13:42:06 (4082937): called boinc_finish(0)

</stderr_txt>
]]>

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