Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
09:51:14 (596169): wrapper (7.7.26015): starting
09:51:14 (596169): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 09:51:14] Arguments: --nthreads 8
[2026-02-02 09:51:14] Threads: 8
[2026-02-02 09:51:14] Checking for CVMFS
[2026-02-02 09:51:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 09:51:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 09:51:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 09:51:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 09:51:15] 2.13.3.0 3577 4307 53064 155794 0 183 5596325 20480001 2766 130560 0 14317846 99.998 154556 518 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-02 09:51:15] CVMFS is ok
[2026-02-02 09:51:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 09:51:15] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-02 09:51:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-02 09:51:15] Further information can be found at the LHC@home message board.
[2026-02-02 09:51:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 09:51:15] Checking for apptainer binary...
[2026-02-02 09:51:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 09:51:15] Running /usr/bin/apptainer --version
[2026-02-02 09:51:15] apptainer version 1.4.4
[2026-02-02 09:51:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 09:51:15] garage
[2026-02-02 09:51:15] apptainer works
[2026-02-02 09:51:15] Set ATHENA_PROC_NUMBER=8
[2026-02-02 09:51:15] Set ATHENA_CORE_NUMBER=8
[2026-02-02 09:51:15] Starting ATLAS job with PandaID=6996649221
[2026-02-02 09:51:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 10:34:43]  *** The last 200 lines of the pilot log: ***
[2026-02-02 10:34:43]  is_altstaged=None
[2026-02-02 10:34:43]  is_tar=False
[2026-02-02 10:34:43]  lfn=log.48317892._009378.job.log.tgz.1
[2026-02-02 10:34:43]  mtime=0
[2026-02-02 10:34:43]  protocol_id=None
[2026-02-02 10:34:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 10:34:43]  replicas=None
[2026-02-02 10:34:43]  scope=mc23_13p6TeV
[2026-02-02 10:34:43]  status=None
[2026-02-02 10:34:43]  status_code=0
[2026-02-02 10:34:43]  storage_token=
[2026-02-02 10:34:43]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6996649221/log.48317892._009378.job.log.tgz.1
[2026-02-02 10:34:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/9a/log.48317892._009378.job.log.tgz.1
[2026-02-02 10:34:43]  workdir=None
[2026-02-02 10:34:43] ]
[2026-02-02 10:34:43] 2026-02-02 17:34:06,018 | INFO     | transferring file log.48317892._009378.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6996649221/log.48317892._009378.job.log.tgz.1 to /var/lib/boinc
[2026-02-02 10:34:43] 2026-02-02 17:34:06,018 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6996649221/log.48317892._009378.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.483178
[2026-02-02 10:34:43] 2026-02-02 17:34:06,030 | INFO     | adding to output.list: log.48317892._009378.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/9a/log.48317892._009378.job.log.tg
[2026-02-02 10:34:43] 2026-02-02 17:34:06,031 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 10:34:43] 2026-02-02 17:34:06,031 | INFO     | summary of transferred files:
[2026-02-02 10:34:43] 2026-02-02 17:34:06,031 | INFO     |  -- lfn=log.48317892._009378.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 10:34:43] 2026-02-02 17:34:06,031 | INFO     | stage-out finished correctly
[2026-02-02 10:34:43] 2026-02-02 17:34:06,360 | INFO     | time since job start (2557s) is within the limit (349056.0s)
[2026-02-02 10:34:43] 2026-02-02 17:34:08,038 | INFO     | monitor loop #198: job 0:6996649221 is in state 'finished'
[2026-02-02 10:34:43] 2026-02-02 17:34:08,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 10:34:43] 2026-02-02 17:34:08,365 | INFO     | time since job start (2559s) is within the limit (349056.0s)
[2026-02-02 10:34:43] 2026-02-02 17:34:09,192 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 10:34:43] 2026-02-02 17:34:10,370 | INFO     | time since job start (2561s) is within the limit (349056.0s)
[2026-02-02 10:34:43] 2026-02-02 17:34:10,540 | INFO     | monitor loop #199: job 0:6996649221 is in state 'finished'
[2026-02-02 10:34:43] 2026-02-02 17:34:10,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,452 | INFO     | job 6996649221 has state=finished
[2026-02-02 10:34:43] 2026-02-02 17:34:11,452 | INFO     | preparing for final server update for job 6996649221 in state='finished'
[2026-02-02 10:34:43] 2026-02-02 17:34:11,453 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-6996649221/jobReport.json
[2026-02-02 10:34:43] 2026-02-02 17:34:11,454 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-02-02 10:34:43] 2026-02-02 17:34:11,454 | INFO     | this job has now completed (state=finished)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,454 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,454 | INFO     | log transfer has been attempted: DONE
[2026-02-02 10:34:43] 2026-02-02 17:34:11,454 | INFO     | job 6996649221 has finished - writing final server update
[2026-02-02 10:34:43] 2026-02-02 17:34:11,454 | INFO     | total number of processed events: 400 (read)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,457 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6996649221/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,457 | INFO     | extracted standard info from prmon json
[2026-02-02 10:34:43] 2026-02-02 17:34:11,457 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 10:34:43] 2026-02-02 17:34:11,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 10:34:43] 2026-02-02 17:34:11,457 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 10:34:43] 2026-02-02 17:34:11,457 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 10:34:43] 2026-02-02 17:34:11,458 | INFO     | fitting pss+swap vs Time
[2026-02-02 10:34:43] 2026-02-02 17:34:11,458 | INFO     | sum of square deviations: 13283970.0
[2026-02-02 10:34:43] 2026-02-02 17:34:11,458 | INFO     | sum of deviations: -30380561.999999985
[2026-02-02 10:34:43] 2026-02-02 17:34:11,458 | INFO     | mean x: 1770052448.0
[2026-02-02 10:34:43] 2026-02-02 17:34:11,458 | INFO     | mean y: 2614405.742857143
[2026-02-02 10:34:43] 2026-02-02 17:34:11,458 | INFO     | intersect: 4050740691.7639594
[2026-02-02 10:34:43] 2026-02-02 17:34:11,458 | INFO     | chi2: 0.002076314495156277
[2026-02-02 10:34:43] 2026-02-02 17:34:11,458 | INFO     | current memory leak: -2.29 B/s (using 35 data points, chi2=0.00)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | could have reported an average CPU frequency of 4582 MHz (5 samples)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | ..............................
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | . Timing measurements:
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | . get job = 0 s
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | . initial setup = 5 s
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | . payload setup = 2 s
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | . stage-in = 0 s
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | . payload execution = 2538 s
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | . stage-out = 0 s
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | . log creation = 0 s
[2026-02-02 10:34:43] 2026-02-02 17:34:11,459 | INFO     | ..............................
[2026-02-02 10:34:43] 2026-02-02 17:34:11,503 | INFO     | 
[2026-02-02 10:34:43] 2026-02-02 17:34:11,503 | INFO     | job summary report
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | --------------------------------------------------
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | PanDA job id: 6996649221
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | task id: 48317892
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | errors: (none)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | pilot state: finished 
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | transexitcode: 0
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | exeerrorcode: 0
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | exeerrordiag: 
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | exitcode: 0
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | exitmsg: OK
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | cpuconsumptiontime: 18727 s
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | nevents: 400
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | neventsw: 0
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | pid: 604925
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | pgrp: 604925
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | corecount: 8
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | event service: False
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | sizes: {0: 2278226, 11: 2278226, 2544: 2303472, 2545: 2312539, 2548: 2312539, 2550: 2312765}
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | --------------------------------------------------
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | 
[2026-02-02 10:34:43] 2026-02-02 17:34:11,504 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-02 10:34:43] 2026-02-02 17:34:11,516 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | job 6996649221 has completed (purged errors)
[2026-02-02 10:34:43] 2026-02-02 17:34:11,517 | INFO     | overall cleanup function is called
[2026-02-02 10:34:43] 2026-02-02 17:34:12,524 | INFO     | --- collectZombieJob: --- 10, [604925]
[2026-02-02 10:34:43] 2026-02-02 17:34:12,524 | INFO     | zombie collector waiting for pid 604925
[2026-02-02 10:34:43] 2026-02-02 17:34:12,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 10:34:43] 2026-02-02 17:34:12,524 | INFO     | collected zombie processes
[2026-02-02 10:34:43] 2026-02-02 17:34:12,524 | INFO     | will attempt to kill all subprocesses of pid=604925
[2026-02-02 10:34:43] 2026-02-02 17:34:12,599 | INFO     | process IDs to be killed: [604925] (in reverse order)
[2026-02-02 10:34:43] 2026-02-02 17:34:12,632 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 10:34:43] 2026-02-02 17:34:12,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 10:34:43] 2026-02-02 17:34:12,634 | INFO     | did not find any defunct processes belonging to 604925
[2026-02-02 10:34:43] 2026-02-02 17:34:12,636 | INFO     | did not find any defunct processes belonging to 604925
[2026-02-02 10:34:43] 2026-02-02 17:34:12,636 | INFO     | ready for new job
[2026-02-02 10:34:43] 2026-02-02 17:34:12,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 10:34:43] 2026-02-02 17:34:12,637 | INFO     | **************************************
[2026-02-02 10:34:43] 2026-02-02 17:34:12,637 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 10:34:43] 2026-02-02 17:34:12,637 | INFO     | **************************************
[2026-02-02 10:34:43] 2026-02-02 17:34:12,637 | INFO     | 
[2026-02-02 10:34:43] 2026-02-02 17:34:12,638 | INFO     | architecture information:
[2026-02-02 10:34:43] 2026-02-02 17:34:12,639 | INFO     | executing command: cat /etc/os-release
[2026-02-02 10:34:43] 2026-02-02 17:34:12,648 | INFO     | cat /etc/os-release:
[2026-02-02 10:34:43] NAME="CentOS Linux"
[2026-02-02 10:34:43] VERSION="7 (Core)"
[2026-02-02 10:34:43] ID="centos"
[2026-02-02 10:34:43] ID_LIKE="rhel fedora"
[2026-02-02 10:34:43] VERSION_ID="7"
[2026-02-02 10:34:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 10:34:43] ANSI_COLOR="0;31"
[2026-02-02 10:34:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 10:34:43] HOME_URL="https://www.centos.org/"
[2026-02-02 10:34:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 10:34:43] 
[2026-02-02 10:34:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 10:34:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 10:34:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 10:34:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 10:34:43] 
[2026-02-02 10:34:43] 2026-02-02 17:34:12,649 | INFO     | **************************************
[2026-02-02 10:34:43] 2026-02-02 17:34:13,151 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-02 10:34:43] 2026-02-02 17:34:13,161 | INFO     | sufficient remaining disk space (696594202624 B)
[2026-02-02 10:34:43] 2026-02-02 17:34:13,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 10:34:43] 2026-02-02 17:34:13,161 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 10:34:43] 2026-02-02 17:34:13,161 | INFO     | update_server=False
[2026-02-02 10:34:43] 2026-02-02 17:34:13,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 10:34:43] 2026-02-02 17:34:13,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 10:34:43] 2026-02-02 17:34:13,290 | INFO     | all payload control threads have been joined
[2026-02-02 10:34:43] 2026-02-02 17:34:13,445 | INFO     | all data control threads have been joined
[2026-02-02 10:34:43] 2026-02-02 17:34:14,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 10:34:43] 2026-02-02 17:34:14,048 | INFO     | aborting loop
[2026-02-02 10:34:43] 2026-02-02 17:34:14,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 10:34:43] 2026-02-02 17:34:14,167 | INFO     | [job] retrieve thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:14,167 | INFO     | [job] queue monitor thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:14,295 | INFO     | [payload] control thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:14,299 | INFO     | all job control threads have been joined
[2026-02-02 10:34:43] 2026-02-02 17:34:14,450 | INFO     | [data] control thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:14,693 | INFO     | [payload] validate_post thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:15,053 | INFO     | [job] job monitor thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:15,214 | INFO     | [job] validate thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:15,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 10:34:43] 2026-02-02 17:34:15,259 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:15,288 | INFO     | [payload] failed_post thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:15,304 | INFO     | [job] control thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:15,374 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:15,508 | INFO     | [data] copytool_in thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:15,655 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:16,093 | INFO     | [data] copytool_out thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:19,244 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:23,440 | INFO     | job.realtimelogging is not enabled
[2026-02-02 10:34:43] 2026-02-02 17:34:24,445 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 10:34:43] 2026-02-02 17:34:33,534 | INFO     | [monitor] cgroup control has ended
[2026-02-02 10:34:43] 2026-02-02 17:34:33,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127175217194816)>', '<ExcThread(monitor, started 127174935066368)>']
[2026-02-02 10:34:43] 2026-02-02 17:34:38,808 | INFO     | all workflow threads have been joined
[2026-02-02 10:34:43] 2026-02-02 17:34:38,808 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 10:34:43] 2026-02-02 17:34:38,808 | INFO     | traces error code: 0
[2026-02-02 10:34:43] 2026-02-02 17:34:38,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 10:34:43] 2026-02-02 17:34:43,520 | INFO     | PID=600361 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 10:34:43] 2026-02-02 17:34:43,521 | INFO     | .. there are 4 such processes running
[2026-02-02 10:34:43] 2026-02-02 17:34:43,521 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 10:34:43] 2026-02-02 17:34:43,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 10:34:43] 2026-02-02 17:34:43,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 10:34:43] 2026-02-02 17:34:43,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 10:34:43] 2026-02-02 17:34:43,521 | INFO     | [monitor] control thread has ended
[2026-02-02 10:34:43] 2026-02-02 17:34:43,578 [wrapper] ==== pilot stdout END ====
[2026-02-02 10:34:43] 2026-02-02 17:34:43,580 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 10:34:43] 2026-02-02 17:34:43,581 [wrapper] pilotpid: 600361
[2026-02-02 10:34:43] 2026-02-02 17:34:43,583 [wrapper] Pilot exit status: 0
[2026-02-02 10:34:43] 2026-02-02 17:34:43,589 [wrapper] pandaids: 6996649221
[2026-02-02 10:34:43] 2026-02-02 17:34:43,610 [wrapper] cleanup supervisor_pilot  650024 600362
[2026-02-02 10:34:43] 2026-02-02 17:34:43,612 [wrapper] Test setup, not cleaning
[2026-02-02 10:34:43] 2026-02-02 17:34:43,614 [wrapper] apfmon messages muted
[2026-02-02 10:34:43] 2026-02-02 17:34:43,615 [wrapper] ==== wrapper stdout END ====
[2026-02-02 10:34:43] 2026-02-02 17:34:43,617 [wrapper] ==== wrapper stderr END ====
[2026-02-02 10:34:43]  *** Error codes and diagnostics ***
[2026-02-02 10:34:43]     "exeErrorCode": 0,
[2026-02-02 10:34:43]     "exeErrorDiag": "",
[2026-02-02 10:34:43]     "pilotErrorCode": 0,
[2026-02-02 10:34:43]     "pilotErrorDiag": "",
[2026-02-02 10:34:43]  *** Listing of results directory ***
[2026-02-02 10:34:43] total 668908
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc    584422 Feb  2 00:08 pilot3.tar.gz
[2026-02-02 10:34:43] -rwx------ 1 boinc boinc     36322 Feb  2 00:11 runpilot2-wrapper.sh
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc      5111 Feb  2 00:14 queuedata.json
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc       100 Feb  2 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 10:34:43] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 09:51 run_atlas
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc       105 Feb  2 09:51 job.xml
[2026-02-02 10:34:43] -rw-r--r-- 2 boinc boinc 493875788 Feb  2 09:51 EVNT.48317889._000180.pool.root.1
[2026-02-02 10:34:43] -rw-r--r-- 2 boinc boinc     15845 Feb  2 09:51 start_atlas.sh
[2026-02-02 10:34:43] drwxrwx--x 2 boinc boinc      4096 Feb  2 09:51 shared
[2026-02-02 10:34:43] -rw-r--r-- 2 boinc boinc    597754 Feb  2 09:51 input.tar.gz
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc      9469 Feb  2 09:51 init_data.xml
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc         0 Feb  2 09:51 boinc_setup_complete
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc         0 Feb  2 09:51 boinc_lockfile
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc      2520 Feb  2 09:51 pandaJob.out
[2026-02-02 10:34:43] -rw------- 1 boinc boinc   1009772 Feb  2 09:51 agis_schedconf.cvmfs.json
[2026-02-02 10:34:43] -rw------- 1 boinc boinc   1511668 Feb  2 09:51 agis_ddmendpoints.agis.ALL.json
[2026-02-02 10:34:43] -rw------- 1 boinc boinc       415 Feb  2 09:51 workernode_map.json
[2026-02-02 10:34:43] drwx------ 5 boinc boinc      4096 Feb  2 09:51 pilot3
[2026-02-02 10:34:43] -rw------- 1 boinc boinc 185744189 Feb  2 10:33 HITS.48317892._009378.pool.root.1
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc       530 Feb  2 10:33 boinc_task_state.xml
[2026-02-02 10:34:43] -rw------- 1 boinc boinc        95 Feb  2 10:33 pilot_heartbeat.json
[2026-02-02 10:34:43] -rw------- 1 boinc boinc      1022 Feb  2 10:34 memory_monitor_summary.json
[2026-02-02 10:34:43] -rw------- 1 boinc boinc    291791 Feb  2 10:34 log.48317892._009378.job.log.tgz.1
[2026-02-02 10:34:43] -rw------- 1 boinc boinc      6265 Feb  2 10:34 heartbeat.json
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc        27 Feb  2 10:34 wrapper_checkpoint.txt
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc      8192 Feb  2 10:34 boinc_mmap_file
[2026-02-02 10:34:43] -rw------- 1 boinc boinc       821 Feb  2 10:34 pilotlog.txt
[2026-02-02 10:34:43] -rw------- 1 boinc boinc    409327 Feb  2 10:34 log.48317892._009378.job.log.1
[2026-02-02 10:34:43] -rw------- 1 boinc boinc       357 Feb  2 10:34 output.list
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc       620 Feb  2 10:34 runtime_log
[2026-02-02 10:34:43] -rw------- 1 boinc boinc    716800 Feb  2 10:34 result.tar.gz
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc      8913 Feb  2 10:34 runtime_log.err
[2026-02-02 10:34:43] -rw------- 1 boinc boinc       651 Feb  2 10:34 EEdNDmGH368n9Rq4apOajLDm4fhM0noT9bVooX4SDmb3RKDmhaba4m.diag
[2026-02-02 10:34:43] -rw-r--r-- 1 boinc boinc     21555 Feb  2 10:34 stderr.txt
[2026-02-02 10:34:43] HITS file was successfully produced:
[2026-02-02 10:34:43] -rw------- 1 boinc boinc 185744189 Feb  2 10:33 shared/HITS.pool.root.1
[2026-02-02 10:34:43]  *** Contents of shared directory: ***
[2026-02-02 10:34:43] total 665004
[2026-02-02 10:34:43] -rw-r--r-- 2 boinc boinc 493875788 Feb  2 09:51 ATLAS.root_0
[2026-02-02 10:34:43] -rw-r--r-- 2 boinc boinc     15845 Feb  2 09:51 start_atlas.sh
[2026-02-02 10:34:43] -rw-r--r-- 2 boinc boinc    597754 Feb  2 09:51 input.tar.gz
[2026-02-02 10:34:43] -rw------- 1 boinc boinc 185744189 Feb  2 10:33 HITS.pool.root.1
[2026-02-02 10:34:43] -rw------- 1 boinc boinc    716800 Feb  2 10:34 result.tar.gz
10:34:45 (596169): run_atlas exited; CPU time 18735.854174
10:34:45 (596169): called boinc_finish(0)

</stderr_txt>
]]>

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