Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:20:06 (3779020): wrapper (7.7.26015): starting
15:20:06 (3779020): wrapper: running run_atlas (--nthreads 9)
[2026-02-02 15:20:06] Arguments: --nthreads 9
[2026-02-02 15:20:06] Threads: 9
[2026-02-02 15:20:06] Checking for CVMFS
[2026-02-02 15:20:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 15:20:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 15:20:07] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 15:20:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 15:20:08] 2.13.3.0 9714 128396 337684 155804 1 146 13725397 21042177 19695 16776704 0 622146385 99.513 748332464 33382 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-02 15:20:08] CVMFS is ok
[2026-02-02 15:20:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 15:20:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 15:20:08] Further information can be found at the LHC@home message board.
[2026-02-02 15:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 15:20:08] Checking for apptainer binary...
[2026-02-02 15:20:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 15:20:08] Running /usr/bin/apptainer --version
[2026-02-02 15:20:09] apptainer version 1.4.5-2.el9
[2026-02-02 15:20:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 15:20:09] c-6-1.aglt2.org
[2026-02-02 15:20:09] apptainer works
[2026-02-02 15:20:09] Set ATHENA_PROC_NUMBER=9
[2026-02-02 15:20:09] Set ATHENA_CORE_NUMBER=9
[2026-02-02 15:20:09] Starting ATLAS job with PandaID=6997084724
[2026-02-02 15:20:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 20:43:00]  *** The last 200 lines of the pilot log: ***
[2026-02-02 20:43:00] 2026-02-03 01:42:16,716 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6997084724/jobReport.json
[2026-02-02 20:43:00] 2026-02-03 01:42:16,719 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-02-02 20:43:00] 2026-02-03 01:42:16,719 | INFO     | this job has now completed (state=finished)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,732 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,732 | INFO     | log transfer has been attempted: DONE
[2026-02-02 20:43:00] 2026-02-03 01:42:16,732 | INFO     | job 6997084724 has finished - writing final server update
[2026-02-02 20:43:00] 2026-02-03 01:42:16,732 | INFO     | total number of processed events: 400 (read)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,739 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6997084724/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,740 | INFO     | extracted standard info from prmon json
[2026-02-02 20:43:00] 2026-02-03 01:42:16,740 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 20:43:00] 2026-02-03 01:42:16,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 20:43:00] 2026-02-03 01:42:16,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 20:43:00] 2026-02-03 01:42:16,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 20:43:00] 2026-02-03 01:42:16,747 | INFO     | fitting pss+swap vs Time
[2026-02-02 20:43:00] 2026-02-03 01:42:16,748 | INFO     | sum of square deviations: 9691997439.59997
[2026-02-02 20:43:00] 2026-02-03 01:42:16,750 | INFO     | sum of deviations: -24631135968.066673
[2026-02-02 20:43:00] 2026-02-03 01:42:16,751 | INFO     | mean x: 1770073308.7333333
[2026-02-02 20:43:00] 2026-02-03 01:42:16,751 | INFO     | mean y: 2584743.987301587
[2026-02-02 20:43:00] 2026-02-03 01:42:16,751 | INFO     | intersect: 4501029632.418464
[2026-02-02 20:43:00] 2026-02-03 01:42:16,751 | INFO     | chi2: 3.1486448938378926
[2026-02-02 20:43:00] 2026-02-03 01:42:16,752 | INFO     | sum of square deviations: 9237778841.809675
[2026-02-02 20:43:00] 2026-02-03 01:42:16,755 | INFO     | sum of deviations: -3794430605.7096705
[2026-02-02 20:43:00] 2026-02-03 01:42:16,755 | INFO     | mean x: 1770073156.235484
[2026-02-02 20:43:00] 2026-02-03 01:42:16,755 | INFO     | mean y: 2591652.064516129
[2026-02-02 20:43:00] 2026-02-03 01:42:16,755 | INFO     | intersect: 729651681.6862357
[2026-02-02 20:43:00] 2026-02-03 01:42:16,756 | INFO     | chi2: 2.469071169704048
[2026-02-02 20:43:00] 2026-02-03 01:42:16,756 | INFO     | current chi2=2.469071169704048 (change=21.583053886572454 %)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,756 | INFO     | right removable region: 309
[2026-02-02 20:43:00] 2026-02-03 01:42:16,756 | INFO     | sum of square deviations: 9237695209.367752
[2026-02-02 20:43:00] 2026-02-03 01:42:16,759 | INFO     | sum of deviations: -92744639690.06451
[2026-02-02 20:43:00] 2026-02-03 01:42:16,759 | INFO     | mean x: 1770073461.2451613
[2026-02-02 20:43:00] 2026-02-03 01:42:16,760 | INFO     | mean y: 2607499.790322581
[2026-02-02 20:43:00] 2026-02-03 01:42:16,760 | INFO     | intersect: 17773796272.25077
[2026-02-02 20:43:00] 2026-02-03 01:42:16,760 | INFO     | chi2: 1.0861632192021922
[2026-02-02 20:43:00] 2026-02-03 01:42:16,760 | INFO     | current chi2=1.0861632192021922 (change=65.50378795246533 %)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,761 | INFO     | sum of square deviations: 8797830520.55741
[2026-02-02 20:43:00] 2026-02-03 01:42:16,763 | INFO     | sum of deviations: -90313363156.88524
[2026-02-02 20:43:00] 2026-02-03 01:42:16,763 | INFO     | mean x: 1770073613.7540984
[2026-02-02 20:43:00] 2026-02-03 01:42:16,764 | INFO     | mean y: 2606628.308196721
[2026-02-02 20:43:00] 2026-02-03 01:42:16,764 | INFO     | intersect: 18173143185.003048
[2026-02-02 20:43:00] 2026-02-03 01:42:16,764 | INFO     | chi2: 1.0587103152277222
[2026-02-02 20:43:00] 2026-02-03 01:42:16,764 | INFO     | current chi2=1.0587103152277222 (change=2.527511840682164 %)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,764 | INFO     | left removable region: 20
[2026-02-02 20:43:00] 2026-02-03 01:42:16,765 | INFO     | sum of square deviations: 7484596771.5570755
[2026-02-02 20:43:00] 2026-02-03 01:42:16,767 | INFO     | sum of deviations: -37930269839.92734
[2026-02-02 20:43:00] 2026-02-03 01:42:16,767 | INFO     | mean x: 1770073735.7543252
[2026-02-02 20:43:00] 2026-02-03 01:42:16,767 | INFO     | mean y: 2602462.141868512
[2026-02-02 20:43:00] 2026-02-03 01:42:16,768 | INFO     | intersect: 8972942011.878532
[2026-02-02 20:43:00] 2026-02-03 01:42:16,768 | INFO     | chi2: 0.24981953258296433
[2026-02-02 20:43:00] 2026-02-03 01:42:16,768 | INFO     | current memory leak: -5.07 B/s (using 289 data points, chi2=0.25)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,769 | INFO     | could have reported an average CPU frequency of 2599 MHz (14 samples)
[2026-02-02 20:43:00] 2026-02-03 01:42:16,769 | INFO     | ..............................
[2026-02-02 20:43:00] 2026-02-03 01:42:16,769 | INFO     | . Timing measurements:
[2026-02-02 20:43:00] 2026-02-03 01:42:16,769 | INFO     | . get job = 0 s
[2026-02-02 20:43:00] 2026-02-03 01:42:16,769 | INFO     | . initial setup = 24 s
[2026-02-02 20:43:00] 2026-02-03 01:42:16,769 | INFO     | . payload setup = 26 s
[2026-02-02 20:43:00] 2026-02-03 01:42:16,770 | INFO     | . stage-in = 0 s
[2026-02-02 20:43:00] 2026-02-03 01:42:16,770 | INFO     | . payload execution = 19219 s
[2026-02-02 20:43:00] 2026-02-03 01:42:16,770 | INFO     | . stage-out = 5 s
[2026-02-02 20:43:00] 2026-02-03 01:42:16,770 | INFO     | . log creation = 0 s
[2026-02-02 20:43:00] 2026-02-03 01:42:16,770 | INFO     | ..............................
[2026-02-02 20:43:00] 2026-02-03 01:42:17,753 | INFO     | 
[2026-02-02 20:43:00] 2026-02-03 01:42:17,753 | INFO     | job summary report
[2026-02-02 20:43:00] 2026-02-03 01:42:17,753 | INFO     | --------------------------------------------------
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | PanDA job id: 6997084724
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | task id: 48317931
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | errors: (none)
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | pilot state: finished 
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | transexitcode: 0
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | exeerrorcode: 0
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | exeerrordiag: 
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | exitcode: 0
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | exitmsg: OK
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | cpuconsumptiontime: 47484 s
[2026-02-02 20:43:00] 2026-02-03 01:42:17,754 | INFO     | nevents: 400
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | neventsw: 0
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | pid: 3797714
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | pgrp: 3797714
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | corecount: 9
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | event service: False
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | sizes: {0: 2277125, 1: 2277810, 2: 2278271, 3: 2278271, 19249: 2311212, 19250: 2311211, 19256: 2320393, 19258: 2320449, 19259: 2320643}
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | --------------------------------------------------
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | 
[2026-02-02 20:43:00] 2026-02-03 01:42:17,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-02 20:43:00] 2026-02-03 01:42:17,886 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,886 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,886 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,886 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,888 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 20:43:00] 2026-02-03 01:42:17,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,888 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 20:43:00] 2026-02-03 01:42:17,889 | INFO     | job 6997084724 has completed (purged errors)
[2026-02-02 20:43:00] 2026-02-03 01:42:17,889 | INFO     | overall cleanup function is called
[2026-02-02 20:43:00] 2026-02-03 01:42:18,949 | INFO     | --- collectZombieJob: --- 10, [3797714]
[2026-02-02 20:43:00] 2026-02-03 01:42:18,950 | INFO     | zombie collector waiting for pid 3797714
[2026-02-02 20:43:00] 2026-02-03 01:42:18,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 20:43:00] 2026-02-03 01:42:18,950 | INFO     | collected zombie processes
[2026-02-02 20:43:00] 2026-02-03 01:42:18,950 | INFO     | will attempt to kill all subprocesses of pid=3797714
[2026-02-02 20:43:00] 2026-02-03 01:42:19,487 | INFO     | PID=3787183 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-02 20:43:00] 2026-02-03 01:42:19,487 | INFO     | .. there are 41 such processes running
[2026-02-02 20:43:00] 2026-02-03 01:42:20,022 | INFO     | process IDs to be killed: [3797714] (in reverse order)
[2026-02-02 20:43:00] 2026-02-03 01:42:20,521 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 20:43:00] 2026-02-03 01:42:20,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 20:43:00] 2026-02-03 01:42:20,538 | INFO     | did not find any defunct processes belonging to 3797714
[2026-02-02 20:43:00] 2026-02-03 01:42:20,609 | INFO     | did not find any defunct processes belonging to 3797714
[2026-02-02 20:43:00] 2026-02-03 01:42:20,610 | INFO     | ready for new job
[2026-02-02 20:43:00] 2026-02-03 01:42:20,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 20:43:00] 2026-02-03 01:42:20,612 | INFO     | **************************************
[2026-02-02 20:43:00] 2026-02-03 01:42:20,612 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 20:43:00] 2026-02-03 01:42:20,612 | INFO     | **************************************
[2026-02-02 20:43:00] 2026-02-03 01:42:20,612 | INFO     | 
[2026-02-02 20:43:00] 2026-02-03 01:42:20,614 | INFO     | architecture information:
[2026-02-02 20:43:00] 2026-02-03 01:42:20,615 | INFO     | executing command: cat /etc/os-release
[2026-02-02 20:43:00] 2026-02-03 01:42:20,660 | INFO     | cat /etc/os-release:
[2026-02-02 20:43:00] NAME="CentOS Linux"
[2026-02-02 20:43:00] VERSION="7 (Core)"
[2026-02-02 20:43:00] ID="centos"
[2026-02-02 20:43:00] ID_LIKE="rhel fedora"
[2026-02-02 20:43:00] VERSION_ID="7"
[2026-02-02 20:43:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 20:43:00] ANSI_COLOR="0;31"
[2026-02-02 20:43:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 20:43:00] HOME_URL="https://www.centos.org/"
[2026-02-02 20:43:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 20:43:00] 
[2026-02-02 20:43:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 20:43:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 20:43:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 20:43:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 20:43:00] 
[2026-02-02 20:43:00] 2026-02-03 01:42:20,661 | INFO     | **************************************
[2026-02-02 20:43:00] 2026-02-03 01:42:21,164 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-02 20:43:00] 2026-02-03 01:42:21,225 | INFO     | sufficient remaining disk space (51230277632 B)
[2026-02-02 20:43:00] 2026-02-03 01:42:21,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 20:43:00] 2026-02-03 01:42:21,225 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 20:43:00] 2026-02-03 01:42:21,226 | INFO     | update_server=False
[2026-02-02 20:43:00] 2026-02-03 01:42:21,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 20:43:00] 2026-02-03 01:42:21,315 | INFO     | all data control threads have been joined
[2026-02-02 20:43:00] 2026-02-03 01:42:21,321 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 20:43:00] 2026-02-03 01:42:21,322 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 20:43:00] 2026-02-03 01:42:21,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 20:43:00] 2026-02-03 01:42:21,322 | INFO     | will abort loop
[2026-02-02 20:43:00] 2026-02-03 01:42:21,719 | INFO     | all payload control threads have been joined
[2026-02-02 20:43:00] 2026-02-03 01:42:22,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 20:43:00] 2026-02-03 01:42:22,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 20:43:00] 2026-02-03 01:42:22,237 | INFO     | [job] retrieve thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:22,322 | INFO     | [data] control thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:22,328 | INFO     | [job] job monitor thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:22,337 | INFO     | all job control threads have been joined
[2026-02-02 20:43:00] 2026-02-03 01:42:22,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 20:43:00] 2026-02-03 01:42:22,451 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:22,576 | INFO     | [payload] failed_post thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:22,726 | INFO     | [payload] control thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:23,344 | INFO     | [job] control thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:23,348 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:23,353 | INFO     | [job] queue monitor thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:23,390 | INFO     | [job] validate thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:23,391 | INFO     | [data] copytool_in thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:23,400 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:23,621 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:23,738 | INFO     | [payload] validate_post thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:24,109 | INFO     | [data] copytool_out thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:26,095 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 20:43:00] 2026-02-03 01:42:52,470 | INFO     | PID=3787183 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 20:43:00] 2026-02-03 01:42:52,470 | INFO     | .. there are 41 such processes running
[2026-02-02 20:43:00] 2026-02-03 01:42:52,470 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 20:43:00] 2026-02-03 01:42:52,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 20:43:00] 2026-02-03 01:42:52,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 20:43:00] 2026-02-03 01:42:52,897 | INFO     | [monitor] cgroup control has ended
[2026-02-02 20:43:00] 2026-02-03 01:42:53,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543298594624)>', '<ExcThread(monitor, started 140542495139584)>']
[2026-02-02 20:43:00] 2026-02-03 01:42:54,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 20:43:00] 2026-02-03 01:42:54,483 | INFO     | [monitor] control thread has ended
[2026-02-02 20:43:00] 2026-02-03 01:42:58,712 | INFO     | all workflow threads have been joined
[2026-02-02 20:43:00] 2026-02-03 01:42:58,716 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 20:43:00] 2026-02-03 01:42:58,718 | INFO     | traces error code: 0
[2026-02-02 20:43:00] 2026-02-03 01:42:58,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 20:43:00] 2026-02-03 01:42:59,366 [wrapper] ==== pilot stdout END ====
[2026-02-02 20:43:00] 2026-02-03 01:42:59,403 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 20:43:00] 2026-02-03 01:42:59,459 [wrapper] pilotpid: 3787183
[2026-02-02 20:43:00] 2026-02-03 01:42:59,484 [wrapper] Pilot exit status: 0
[2026-02-02 20:43:00] 2026-02-03 01:42:59,625 [wrapper] pandaids: 6997084724
[2026-02-02 20:43:00] 2026-02-03 01:42:59,871 [wrapper] cleanup supervisor_pilot 1372124 3787184
[2026-02-02 20:43:00] 2026-02-03 01:42:59,876 [wrapper] Test setup, not cleaning
[2026-02-02 20:43:00] 2026-02-03 01:42:59,919 [wrapper] apfmon messages muted
[2026-02-02 20:43:00] 2026-02-03 01:42:59,992 [wrapper] ==== wrapper stdout END ====
[2026-02-02 20:43:00] 2026-02-03 01:43:00,018 [wrapper] ==== wrapper stderr END ====
[2026-02-02 20:43:01]  *** Error codes and diagnostics ***
[2026-02-02 20:43:01]     "exeErrorCode": 0,
[2026-02-02 20:43:01]     "exeErrorDiag": "",
[2026-02-02 20:43:01]     "pilotErrorCode": 0,
[2026-02-02 20:43:01]     "pilotErrorDiag": "",
[2026-02-02 20:43:01]  *** Listing of results directory ***
[2026-02-02 20:43:01] total 679488
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 10:51 pilot3.tar.gz
[2026-02-02 20:43:01] -rwx------. 1 boincer umatlas     36322 Feb  2 10:52 runpilot2-wrapper.sh
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 10:53 queuedata.json
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas       100 Feb  2 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 20:43:01] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 15:20 run_atlas
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas       105 Feb  2 15:20 job.xml
[2026-02-02 20:43:01] -rw-r--r--. 2 boincer umatlas 504041008 Feb  2 15:20 EVNT.48317929._000271.pool.root.1
[2026-02-02 20:43:01] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 15:20 start_atlas.sh
[2026-02-02 20:43:01] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 15:20 shared
[2026-02-02 20:43:01] -rw-r--r--. 2 boincer umatlas    597755 Feb  2 15:20 input.tar.gz
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas         0 Feb  2 15:20 boinc_lockfile
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas      2513 Feb  2 15:20 pandaJob.out
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas        57 Feb  2 15:20 setup.sh.local
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas   1009316 Feb  2 15:20 agis_schedconf.cvmfs.json
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas       430 Feb  2 15:21 workernode_map.json
[2026-02-02 20:43:01] drwx------. 5 boincer umatlas      4096 Feb  2 15:21 pilot3
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas      6657 Feb  2 20:39 init_data.xml
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas 182296401 Feb  2 20:40 HITS.48317931._014867.pool.root.1
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas       531 Feb  2 20:40 boinc_task_state.xml
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas        95 Feb  2 20:41 pilot_heartbeat.json
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas      1047 Feb  2 20:42 memory_monitor_summary.json
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas   1511668 Feb  2 20:42 agis_ddmendpoints.agis.ALL.json
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas    542316 Feb  2 20:42 log.48317931._014867.job.log.tgz.1
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas      6380 Feb  2 20:42 heartbeat.json
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas      5006 Feb  2 20:42 pilotlog.txt
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 20:42 boinc_mmap_file
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas   2214008 Feb  2 20:43 log.48317931._014867.job.log.1
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas        28 Feb  2 20:43 wrapper_checkpoint.txt
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas       357 Feb  2 20:43 output.list
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas       620 Feb  2 20:43 runtime_log
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas   2775040 Feb  2 20:43 result.tar.gz
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas      9327 Feb  2 20:43 runtime_log.err
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas       654 Feb  2 20:43 CSHLDmwOB78n9Rq4apOajLDm4fhM0noT9bVooX4SDmudSKDmK62Umn.diag
[2026-02-02 20:43:01] -rw-r--r--. 1 boincer umatlas     21438 Feb  2 20:43 stderr.txt
[2026-02-02 20:43:01] HITS file was successfully produced:
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas 182296401 Feb  2 20:40 shared/HITS.pool.root.1
[2026-02-02 20:43:01]  *** Contents of shared directory: ***
[2026-02-02 20:43:01] total 673572
[2026-02-02 20:43:01] -rw-r--r--. 2 boincer umatlas 504041008 Feb  2 15:20 ATLAS.root_0
[2026-02-02 20:43:01] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 15:20 start_atlas.sh
[2026-02-02 20:43:01] -rw-r--r--. 2 boincer umatlas    597755 Feb  2 15:20 input.tar.gz
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas 182296401 Feb  2 20:40 HITS.pool.root.1
[2026-02-02 20:43:01] -rw-------. 1 boincer umatlas   2775040 Feb  2 20:43 result.tar.gz
20:43:02 (3779020): run_atlas exited; CPU time 48258.585130
20:43:02 (3779020): called boinc_finish(0)

</stderr_txt>
]]>

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