Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:01:45 (3426008): wrapper (7.7.26015): starting
11:01:45 (3426008): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 11:01:45] Arguments: --nthreads 8
[2026-02-02 11:01:45] Threads: 8
[2026-02-02 11:01:45] Checking for CVMFS
[2026-02-02 11:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 11:01:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 11:01:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 11:01:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 11:01:47] 2.13.3.0 9438 128161 239932 155792 1 632 34893763 40960001 31046 16776704 0 1599607926 99.740 1112853986 48247 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-02 11:01:47] CVMFS is ok
[2026-02-02 11:01:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 11:01:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 11:01:47] Further information can be found at the LHC@home message board.
[2026-02-02 11:01:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 11:01:47] Checking for apptainer binary...
[2026-02-02 11:01:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 11:01:47] Running /usr/bin/apptainer --version
[2026-02-02 11:01:47] apptainer version 1.4.5-2.el9
[2026-02-02 11:01:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 11:01:47] c8-7-3.aglt2.org
[2026-02-02 11:01:47] apptainer works
[2026-02-02 11:01:47] Set ATHENA_PROC_NUMBER=8
[2026-02-02 11:01:47] Set ATHENA_CORE_NUMBER=8
[2026-02-02 11:01:47] Starting ATLAS job with PandaID=6996650630
[2026-02-02 11:01:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 12:38:04]  *** The last 200 lines of the pilot log: ***
[2026-02-02 12:38:04]  mtime=0
[2026-02-02 12:38:04]  protocol_id=None
[2026-02-02 12:38:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 12:38:04]  replicas=None
[2026-02-02 12:38:04]  scope=mc23_13p6TeV
[2026-02-02 12:38:04]  status=None
[2026-02-02 12:38:04]  status_code=0
[2026-02-02 12:38:04]  storage_token=
[2026-02-02 12:38:04]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6996650630/log.48317892._009904.job.log.tgz.1
[2026-02-02 12:38:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/98/log.48317892._009904.job.log.tgz.1
[2026-02-02 12:38:04]  workdir=None
[2026-02-02 12:38:04] ]
[2026-02-02 12:38:04] 2026-02-02 17:36:53,358 | INFO     | transferring file log.48317892._009904.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6996650630/log.48317892._009904.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-02 12:38:04] 2026-02-02 17:36:53,358 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6996650630/log.48317892._009904.job.log.tgz.1 /tmp/boinchome/slots/5/log.48317892._009904.job
[2026-02-02 12:38:04] 2026-02-02 17:36:53,402 | INFO     | number of running child processes to parent process 3436636: 1
[2026-02-02 12:38:04] 2026-02-02 17:36:53,402 | INFO     | maximum number of monitored processes: 6
[2026-02-02 12:38:04] 2026-02-02 17:36:53,465 | INFO     | adding to output.list: log.48317892._009904.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/98/log.48317892._009904.job.log.tg
[2026-02-02 12:38:04] 2026-02-02 17:36:53,466 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 12:38:04] 2026-02-02 17:36:53,466 | INFO     | summary of transferred files:
[2026-02-02 12:38:04] 2026-02-02 17:36:53,466 | INFO     |  -- lfn=log.48317892._009904.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 12:38:04] 2026-02-02 17:36:53,466 | INFO     | stage-out finished correctly
[2026-02-02 12:38:04] 2026-02-02 17:36:53,585 | INFO     | time since job start (5647s) is within the limit (349056.0s)
[2026-02-02 12:38:04] 2026-02-02 17:36:55,592 | INFO     | time since job start (5649s) is within the limit (349056.0s)
[2026-02-02 12:38:04] 2026-02-02 17:36:55,906 | INFO     | monitor loop #381: job 0:6996650630 is in state 'finished'
[2026-02-02 12:38:04] 2026-02-02 17:36:55,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 12:38:04] 2026-02-02 17:36:56,517 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 12:38:04] 2026-02-02 17:36:57,605 | INFO     | time since job start (5651s) is within the limit (349056.0s)
[2026-02-02 12:38:04] 2026-02-02 17:36:58,425 | INFO     | monitor loop #382: job 0:6996650630 is in state 'finished'
[2026-02-02 12:38:04] 2026-02-02 17:36:58,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 12:38:04] 2026-02-02 17:36:58,717 | INFO     | job 6996650630 has state=finished
[2026-02-02 12:38:04] 2026-02-02 17:36:58,717 | INFO     | preparing for final server update for job 6996650630 in state='finished'
[2026-02-02 12:38:04] 2026-02-02 17:36:58,985 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-02 12:38:04] 2026-02-02 17:36:58,986 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-6996650630/jobReport.json
[2026-02-02 12:38:04] 2026-02-02 17:36:58,991 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-02-02 12:38:04] 2026-02-02 17:36:58,991 | INFO     | this job has now completed (state=finished)
[2026-02-02 12:38:04] 2026-02-02 17:36:58,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 12:38:04] 2026-02-02 17:36:58,992 | INFO     | log transfer has been attempted: DONE
[2026-02-02 12:38:04] 2026-02-02 17:36:58,992 | INFO     | job 6996650630 has finished - writing final server update
[2026-02-02 12:38:04] 2026-02-02 17:36:58,992 | INFO     | total number of processed events: 400 (read)
[2026-02-02 12:38:04] 2026-02-02 17:36:59,057 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6996650630/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 12:38:04] 2026-02-02 17:36:59,073 | INFO     | extracted standard info from prmon json
[2026-02-02 12:38:04] 2026-02-02 17:36:59,073 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 12:38:04] 2026-02-02 17:36:59,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 12:38:04] 2026-02-02 17:36:59,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 12:38:04] 2026-02-02 17:36:59,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 12:38:04] 2026-02-02 17:36:59,079 | INFO     | fitting pss+swap vs Time
[2026-02-02 12:38:04] 2026-02-02 17:36:59,079 | INFO     | sum of square deviations: 190408572.98823565
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | sum of deviations: 558086038.3529412
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | mean x: 1770051099.0117648
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | mean y: 2520343.6470588236
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | intersect: -5185485585.008154
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | chi2: 0.014540639565908649
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | current memory leak: 2.93 B/s (using 85 data points, chi2=0.01)
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | ..............................
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | . Timing measurements:
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | . get job = 0 s
[2026-02-02 12:38:04] 2026-02-02 17:36:59,080 | INFO     | . initial setup = 21 s
[2026-02-02 12:38:04] 2026-02-02 17:36:59,081 | INFO     | . payload setup = 33 s
[2026-02-02 12:38:04] 2026-02-02 17:36:59,081 | INFO     | . stage-in = 0 s
[2026-02-02 12:38:04] 2026-02-02 17:36:59,081 | INFO     | . payload execution = 5594 s
[2026-02-02 12:38:04] 2026-02-02 17:36:59,081 | INFO     | . stage-out = 1 s
[2026-02-02 12:38:04] 2026-02-02 17:36:59,081 | INFO     | . log creation = 0 s
[2026-02-02 12:38:04] 2026-02-02 17:36:59,081 | INFO     | ..............................
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | 
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | job summary report
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | --------------------------------------------------
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | PanDA job id: 6996650630
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | task id: 48317892
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | errors: (none)
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | pilot state: finished 
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | transexitcode: 0
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | exeerrorcode: 0
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | exeerrordiag: 
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | exitcode: 0
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | exitmsg: OK
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | cpuconsumptiontime: 23796 s
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | nevents: 400
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | neventsw: 0
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | pid: 3436636
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | pgrp: 3436636
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | corecount: 8
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | event service: False
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | sizes: {0: 2278221, 11: 2278221, 5632: 2304943, 5636: 2313941, 5639: 2313997, 5642: 2314191}
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | --------------------------------------------------
[2026-02-02 12:38:04] 2026-02-02 17:36:59,582 | INFO     | 
[2026-02-02 12:38:04] 2026-02-02 17:36:59,583 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-02 12:38:04] 2026-02-02 17:36:59,614 | INFO     | time since job start (5653s) is within the limit (349056.0s)
[2026-02-02 12:38:04] 2026-02-02 17:36:59,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,675 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,675 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,675 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | job 6996650630 has completed (purged errors)
[2026-02-02 12:38:04] 2026-02-02 17:36:59,676 | INFO     | overall cleanup function is called
[2026-02-02 12:38:04] 2026-02-02 17:37:00,697 | INFO     | --- collectZombieJob: --- 10, [3436636]
[2026-02-02 12:38:04] 2026-02-02 17:37:00,697 | INFO     | zombie collector waiting for pid 3436636
[2026-02-02 12:38:04] 2026-02-02 17:37:00,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 12:38:04] 2026-02-02 17:37:00,697 | INFO     | collected zombie processes
[2026-02-02 12:38:04] 2026-02-02 17:37:00,697 | INFO     | will attempt to kill all subprocesses of pid=3436636
[2026-02-02 12:38:04] 2026-02-02 17:37:01,513 | INFO     | process IDs to be killed: [3436636] (in reverse order)
[2026-02-02 12:38:04] 2026-02-02 17:37:01,708 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 12:38:04] 2026-02-02 17:37:01,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 12:38:04] 2026-02-02 17:37:01,836 | INFO     | did not find any defunct processes belonging to 3436636
[2026-02-02 12:38:04] 2026-02-02 17:37:01,918 | INFO     | did not find any defunct processes belonging to 3436636
[2026-02-02 12:38:04] 2026-02-02 17:37:01,918 | INFO     | ready for new job
[2026-02-02 12:38:04] 2026-02-02 17:37:01,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 12:38:04] 2026-02-02 17:37:01,927 | INFO     | **************************************
[2026-02-02 12:38:04] 2026-02-02 17:37:01,927 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 12:38:04] 2026-02-02 17:37:01,927 | INFO     | **************************************
[2026-02-02 12:38:04] 2026-02-02 17:37:01,927 | INFO     | 
[2026-02-02 12:38:04] 2026-02-02 17:37:01,936 | INFO     | architecture information:
[2026-02-02 12:38:04] 2026-02-02 17:37:01,941 | INFO     | executing command: cat /etc/os-release
[2026-02-02 12:38:04] 2026-02-02 17:37:02,004 | INFO     | cat /etc/os-release:
[2026-02-02 12:38:04] NAME="CentOS Linux"
[2026-02-02 12:38:04] VERSION="7 (Core)"
[2026-02-02 12:38:04] ID="centos"
[2026-02-02 12:38:04] ID_LIKE="rhel fedora"
[2026-02-02 12:38:04] VERSION_ID="7"
[2026-02-02 12:38:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 12:38:04] ANSI_COLOR="0;31"
[2026-02-02 12:38:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 12:38:04] HOME_URL="https://www.centos.org/"
[2026-02-02 12:38:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 12:38:04] 
[2026-02-02 12:38:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 12:38:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 12:38:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 12:38:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 12:38:04] 
[2026-02-02 12:38:04] 2026-02-02 17:37:02,004 | INFO     | **************************************
[2026-02-02 12:38:04] 2026-02-02 17:37:02,509 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-02 12:38:04] 2026-02-02 17:37:02,567 | INFO     | sufficient remaining disk space (165234606080 B)
[2026-02-02 12:38:04] 2026-02-02 17:37:02,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 12:38:04] 2026-02-02 17:37:02,567 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 12:38:04] 2026-02-02 17:37:02,567 | INFO     | update_server=False
[2026-02-02 12:38:04] 2026-02-02 17:37:02,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 12:38:04] 2026-02-02 17:37:02,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 12:38:04] 2026-02-02 17:37:02,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 12:38:04] 2026-02-02 17:37:02,568 | INFO     | aborting loop
[2026-02-02 12:38:04] 2026-02-02 17:37:02,642 | INFO     | all payload control threads have been joined
[2026-02-02 12:38:04] 2026-02-02 17:37:02,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 12:38:04] 2026-02-02 17:37:02,833 | INFO     | all data control threads have been joined
[2026-02-02 12:38:04] 2026-02-02 17:37:03,574 | INFO     | [job] retrieve thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:03,574 | INFO     | [job] job monitor thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:03,650 | INFO     | [payload] control thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:03,764 | INFO     | all job control threads have been joined
[2026-02-02 12:38:04] 2026-02-02 17:37:03,798 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:03,817 | INFO     | [data] copytool_in thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:03,873 | INFO     | [data] control thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:04,231 | INFO     | [payload] failed_post thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:04,308 | INFO     | [payload] validate_post thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:04,319 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:04,415 | INFO     | [job] validate thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:04,575 | INFO     | [data] copytool_out thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:04,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 12:38:04] 2026-02-02 17:37:04,770 | INFO     | [job] control thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:04,903 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:04,989 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:05,606 | INFO     | [job] queue monitor thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:06,769 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 12:38:04] 2026-02-02 17:37:33,490 | INFO     | PID=3430878 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 12:38:04] 2026-02-02 17:37:33,490 | INFO     | .. there are 36 such processes running
[2026-02-02 12:38:04] 2026-02-02 17:37:33,491 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 12:38:04] 2026-02-02 17:37:33,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 12:38:04] 2026-02-02 17:37:33,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 12:38:04] 2026-02-02 17:37:55,880 | INFO     | [monitor] cgroup control has ended
[2026-02-02 12:38:04] 2026-02-02 17:37:57,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695630116672)>', '<ExcThread(monitor, started 139694994081536)>']
[2026-02-02 12:38:04] 2026-02-02 17:37:58,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 12:38:04] 2026-02-02 17:37:58,648 | INFO     | [monitor] control thread has ended
[2026-02-02 12:38:04] 2026-02-02 17:38:02,960 | INFO     | all workflow threads have been joined
[2026-02-02 12:38:04] 2026-02-02 17:38:02,960 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 12:38:04] 2026-02-02 17:38:02,960 | INFO     | traces error code: 0
[2026-02-02 12:38:04] 2026-02-02 17:38:02,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 12:38:04] 2026-02-02 17:38:03,632 [wrapper] ==== pilot stdout END ====
[2026-02-02 12:38:04] 2026-02-02 17:38:03,638 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 12:38:04] 2026-02-02 17:38:03,639 [wrapper] pilotpid: 3430878
[2026-02-02 12:38:04] 2026-02-02 17:38:03,641 [wrapper] Pilot exit status: 0
[2026-02-02 12:38:04] 2026-02-02 17:38:03,717 [wrapper] pandaids: 6996650630
[2026-02-02 12:38:04] 2026-02-02 17:38:03,888 [wrapper] cleanup supervisor_pilot   96995 3430879
[2026-02-02 12:38:04] 2026-02-02 17:38:03,905 [wrapper] Test setup, not cleaning
[2026-02-02 12:38:04] 2026-02-02 17:38:03,945 [wrapper] apfmon messages muted
[2026-02-02 12:38:04] 2026-02-02 17:38:03,955 [wrapper] ==== wrapper stdout END ====
[2026-02-02 12:38:04] 2026-02-02 17:38:03,974 [wrapper] ==== wrapper stderr END ====
[2026-02-02 12:38:04]  *** Error codes and diagnostics ***
[2026-02-02 12:38:04]     "exeErrorCode": 0,
[2026-02-02 12:38:04]     "exeErrorDiag": "",
[2026-02-02 12:38:04]     "pilotErrorCode": 0,
[2026-02-02 12:38:04]     "pilotErrorDiag": "",
[2026-02-02 12:38:04]  *** Listing of results directory ***
[2026-02-02 12:38:04] total 667088
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 05:55 queuedata.json
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 05:55 pilot3.tar.gz
[2026-02-02 12:38:04] -rwx------. 1 boincer umatlas     36322 Feb  2 05:56 runpilot2-wrapper.sh
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas       100 Feb  2 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 12:38:04] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 11:01 run_atlas
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas       105 Feb  2 11:01 job.xml
[2026-02-02 12:38:04] -rw-r--r--. 2 boincer umatlas 494397631 Feb  2 11:01 EVNT.48317889._000190.pool.root.1
[2026-02-02 12:38:04] -rw-r--r--. 2 boincer umatlas    597759 Feb  2 11:01 input.tar.gz
[2026-02-02 12:38:04] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 11:01 start_atlas.sh
[2026-02-02 12:38:04] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 11:01 shared
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas         0 Feb  2 11:01 boinc_lockfile
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas      2521 Feb  2 11:01 pandaJob.out
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas        57 Feb  2 11:01 setup.sh.local
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas   1009772 Feb  2 11:02 agis_schedconf.cvmfs.json
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas   1511668 Feb  2 11:02 agis_ddmendpoints.agis.ALL.json
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas       429 Feb  2 11:02 workernode_map.json
[2026-02-02 12:38:04] drwx------. 5 boincer umatlas      4096 Feb  2 11:02 pilot3
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas      7171 Feb  2 12:29 init_data.xml
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas 182457865 Feb  2 12:35 HITS.48317892._009904.pool.root.1
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas       530 Feb  2 12:35 boinc_task_state.xml
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas      1049 Feb  2 12:36 memory_monitor_summary.json
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas    365371 Feb  2 12:36 log.48317892._009904.job.log.tgz.1
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas      6353 Feb  2 12:36 heartbeat.json
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas        95 Feb  2 12:37 pilot_heartbeat.json
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 12:38 boinc_mmap_file
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas        27 Feb  2 12:38 wrapper_checkpoint.txt
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas      4821 Feb  2 12:38 pilotlog.txt
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas    781257 Feb  2 12:38 log.48317892._009904.job.log.1
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas       357 Feb  2 12:38 output.list
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas       620 Feb  2 12:38 runtime_log
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas   1167360 Feb  2 12:38 result.tar.gz
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas      9331 Feb  2 12:38 runtime_log.err
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas       655 Feb  2 12:38 oM7MDmwm668n9Rq4apOajLDm4fhM0noT9bVooX4SDmZASKDmYJMnmm.diag
[2026-02-02 12:38:04] -rw-r--r--. 1 boincer umatlas     21720 Feb  2 12:38 stderr.txt
[2026-02-02 12:38:04] HITS file was successfully produced:
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas 182457865 Feb  2 12:35 shared/HITS.pool.root.1
[2026-02-02 12:38:04]  *** Contents of shared directory: ***
[2026-02-02 12:38:04] total 662744
[2026-02-02 12:38:04] -rw-r--r--. 2 boincer umatlas 494397631 Feb  2 11:01 ATLAS.root_0
[2026-02-02 12:38:04] -rw-r--r--. 2 boincer umatlas    597759 Feb  2 11:01 input.tar.gz
[2026-02-02 12:38:04] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 11:01 start_atlas.sh
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas 182457865 Feb  2 12:35 HITS.pool.root.1
[2026-02-02 12:38:04] -rw-------. 1 boincer umatlas   1167360 Feb  2 12:38 result.tar.gz
12:38:06 (3426008): run_atlas exited; CPU time 23977.691448
12:38:06 (3426008): called boinc_finish(0)

</stderr_txt>
]]>

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