Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:35:27 (1045816): wrapper (7.7.26015): starting
11:35:27 (1045816): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 11:35:27] Arguments: --nthreads 12
[2026-02-03 11:35:27] Threads: 12
[2026-02-03 11:35:27] Checking for CVMFS
[2026-02-03 11:35:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 11:35:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 11:35:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 11:35:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 11:35:29] 2.13.3.0 1749563 8180 52388 155828 0 50 3306341 4096001 2736 130560 0 9536891 99.994 288295 1110 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-02-03 11:35:29] CVMFS is ok
[2026-02-03 11:35:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 11:35:29] Checking for apptainer binary...
[2026-02-03 11:35:29] apptainer is not installed, using version from CVMFS
[2026-02-03 11:35:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 11:35:29] dualxeon2
[2026-02-03 11:35:29] apptainer works
[2026-02-03 11:35:29] Set ATHENA_PROC_NUMBER=12
[2026-02-03 11:35:29] Set ATHENA_CORE_NUMBER=12
[2026-02-03 11:35:29] Starting ATLAS job with PandaID=6996650486
[2026-02-03 11:35:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 13:32:18]  *** The last 200 lines of the pilot log: ***
[2026-02-03 13:32:18] 2026-02-03 13:31:22,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 13:32:18] 2026-02-03 13:31:22,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 13:32:18] 2026-02-03 13:31:22,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 13:32:18] 2026-02-03 13:31:22,301 | INFO     | fitting pss+swap vs Time
[2026-02-03 13:32:18] 2026-02-03 13:31:22,301 | INFO     | sum of square deviations: 447383272.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,306 | INFO     | sum of deviations: 5614184714.999998
[2026-02-03 13:32:18] 2026-02-03 13:31:22,306 | INFO     | mean x: 1770122000.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,306 | INFO     | mean y: 2706510.03539823
[2026-02-03 13:32:18] 2026-02-03 13:31:22,306 | INFO     | intersect: -22210443820.013657
[2026-02-03 13:32:18] 2026-02-03 13:31:22,306 | INFO     | chi2: 1.8196391181187597
[2026-02-03 13:32:18] 2026-02-03 13:31:22,307 | INFO     | sum of square deviations: 390582207.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,307 | INFO     | sum of deviations: 6161404978.999998
[2026-02-03 13:32:18] 2026-02-03 13:31:22,308 | INFO     | mean x: 1770121847.5
[2026-02-03 13:32:18] 2026-02-03 13:31:22,308 | INFO     | mean y: 2707980.185185185
[2026-02-03 13:32:18] 2026-02-03 13:31:22,308 | INFO     | intersect: -27920831211.202442
[2026-02-03 13:32:18] 2026-02-03 13:31:22,308 | INFO     | chi2: 1.8233670387053855
[2026-02-03 13:32:18] 2026-02-03 13:31:22,308 | INFO     | current chi2=1.8233670387053855 (change=-0.20487142475151768 %)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,309 | INFO     | right removable region: 107
[2026-02-03 13:32:18] 2026-02-03 13:31:22,310 | INFO     | sum of square deviations: 390582207.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,310 | INFO     | sum of deviations: -16216963612.5
[2026-02-03 13:32:18] 2026-02-03 13:31:22,310 | INFO     | mean x: 1770122152.5
[2026-02-03 13:32:18] 2026-02-03 13:31:22,311 | INFO     | mean y: 2764243.527777778
[2026-02-03 13:32:18] 2026-02-03 13:31:22,311 | INFO     | intersect: 73498192407.70085
[2026-02-03 13:32:18] 2026-02-03 13:31:22,311 | INFO     | chi2: 0.08796803790745368
[2026-02-03 13:32:18] 2026-02-03 13:31:22,311 | INFO     | current chi2=0.08796803790745368 (change=95.16563273280255 %)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,311 | INFO     | sum of square deviations: 338804492.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,312 | INFO     | sum of deviations: -17471642204.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,312 | INFO     | mean x: 1770122305.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,312 | INFO     | mean y: 2767674.9611650486
[2026-02-03 13:32:18] 2026-02-03 13:31:22,312 | INFO     | intersect: 91285334171.39285
[2026-02-03 13:32:18] 2026-02-03 13:31:22,312 | INFO     | chi2: 0.026967935605661204
[2026-02-03 13:32:18] 2026-02-03 13:31:22,313 | INFO     | current chi2=0.026967935605661204 (change=69.3434840117354 %)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,313 | INFO     | sum of square deviations: 291817564.5
[2026-02-03 13:32:18] 2026-02-03 13:31:22,319 | INFO     | sum of deviations: -13609984988.000002
[2026-02-03 13:32:18] 2026-02-03 13:31:22,320 | INFO     | mean x: 1770122457.5
[2026-02-03 13:32:18] 2026-02-03 13:31:22,320 | INFO     | mean y: 2755121.326530612
[2026-02-03 13:32:18] 2026-02-03 13:31:22,320 | INFO     | intersect: 82558923783.67131
[2026-02-03 13:32:18] 2026-02-03 13:31:22,320 | INFO     | chi2: 0.020135109714750035
[2026-02-03 13:32:18] 2026-02-03 13:31:22,320 | INFO     | current chi2=0.020135109714750035 (change=25.3368518481511 %)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,321 | INFO     | sum of square deviations: 249388862.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,321 | INFO     | sum of deviations: -11276357215.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,321 | INFO     | mean x: 1770122610.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,321 | INFO     | mean y: 2746822.559139785
[2026-02-03 13:32:18] 2026-02-03 13:31:22,321 | INFO     | intersect: 80040542835.71121
[2026-02-03 13:32:18] 2026-02-03 13:31:22,322 | INFO     | chi2: 0.01662212266214429
[2026-02-03 13:32:18] 2026-02-03 13:31:22,322 | INFO     | current chi2=0.01662212266214429 (change=17.447071818199706 %)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,322 | INFO     | left removable region: 40
[2026-02-03 13:32:18] 2026-02-03 13:31:22,322 | INFO     | sum of square deviations: 93240818.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,322 | INFO     | sum of deviations: -4044333611.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,322 | INFO     | mean x: 1770123037.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,323 | INFO     | mean y: 2717812.0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,323 | INFO     | intersect: 76782053812.08203
[2026-02-03 13:32:18] 2026-02-03 13:31:22,323 | INFO     | chi2: 0.011848910102466146
[2026-02-03 13:32:18] 2026-02-03 13:31:22,323 | INFO     | current memory leak: -43.38 B/s (using 67 data points, chi2=0.01)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | could have reported an average CPU frequency of 2594 MHz (7 samples)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | ..............................
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | . Timing measurements:
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | . get job = 0 s
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | . initial setup = 11 s
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | . payload setup = 12 s
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | . stage-in = 0 s
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | . payload execution = 6899 s
[2026-02-03 13:32:18] 2026-02-03 13:31:22,327 | INFO     | . stage-out = 1 s
[2026-02-03 13:32:18] 2026-02-03 13:31:22,328 | INFO     | . log creation = 0 s
[2026-02-03 13:32:18] 2026-02-03 13:31:22,328 | INFO     | ..............................
[2026-02-03 13:32:18] 2026-02-03 13:31:22,873 | INFO     | 
[2026-02-03 13:32:18] 2026-02-03 13:31:22,874 | INFO     | job summary report
[2026-02-03 13:32:18] 2026-02-03 13:31:22,874 | INFO     | --------------------------------------------------
[2026-02-03 13:32:18] 2026-02-03 13:31:22,874 | INFO     | PanDA job id: 6996650486
[2026-02-03 13:32:18] 2026-02-03 13:31:22,874 | INFO     | task id: 48317872
[2026-02-03 13:32:18] 2026-02-03 13:31:22,874 | INFO     | errors: (none)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,874 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 13:32:18] 2026-02-03 13:31:22,874 | INFO     | pilot state: finished 
[2026-02-03 13:32:18] 2026-02-03 13:31:22,874 | INFO     | transexitcode: 0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,875 | INFO     | exeerrorcode: 0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,875 | INFO     | exeerrordiag: 
[2026-02-03 13:32:18] 2026-02-03 13:31:22,875 | INFO     | exitcode: 0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,875 | INFO     | exitmsg: OK
[2026-02-03 13:32:18] 2026-02-03 13:31:22,875 | INFO     | cpuconsumptiontime: 53082 s
[2026-02-03 13:32:18] 2026-02-03 13:31:22,875 | INFO     | nevents: 400
[2026-02-03 13:32:18] 2026-02-03 13:31:22,875 | INFO     | neventsw: 0
[2026-02-03 13:32:18] 2026-02-03 13:31:22,875 | INFO     | pid: 1056920
[2026-02-03 13:32:18] 2026-02-03 13:31:22,876 | INFO     | pgrp: 1056920
[2026-02-03 13:32:18] 2026-02-03 13:31:22,876 | INFO     | corecount: 12
[2026-02-03 13:32:18] 2026-02-03 13:31:22,876 | INFO     | event service: False
[2026-02-03 13:32:18] 2026-02-03 13:31:22,876 | INFO     | sizes: {0: 2277132, 1: 2278274, 2: 2278302, 6914: 2305407, 6915: 2305406, 6918: 2314692, 6919: 2314830}
[2026-02-03 13:32:18] 2026-02-03 13:31:22,876 | INFO     | --------------------------------------------------
[2026-02-03 13:32:18] 2026-02-03 13:31:22,876 | INFO     | 
[2026-02-03 13:32:18] 2026-02-03 13:31:22,876 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/12
[2026-02-03 13:32:18] 2026-02-03 13:31:22,901 | INFO     | time since job start (6921s) is within the limit (349056.0s)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,910 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,910 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,910 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,910 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,912 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,912 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 13:32:18] 2026-02-03 13:31:22,912 | INFO     | job 6996650486 has completed (purged errors)
[2026-02-03 13:32:18] 2026-02-03 13:31:22,913 | INFO     | overall cleanup function is called
[2026-02-03 13:32:18] 2026-02-03 13:31:23,932 | INFO     | --- collectZombieJob: --- 10, [1056920]
[2026-02-03 13:32:18] 2026-02-03 13:31:23,933 | INFO     | zombie collector waiting for pid 1056920
[2026-02-03 13:32:18] 2026-02-03 13:31:23,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 13:32:18] 2026-02-03 13:31:23,933 | INFO     | collected zombie processes
[2026-02-03 13:32:18] 2026-02-03 13:31:23,933 | INFO     | will attempt to kill all subprocesses of pid=1056920
[2026-02-03 13:32:18] 2026-02-03 13:31:24,210 | INFO     | process IDs to be killed: [1056920] (in reverse order)
[2026-02-03 13:32:18] 2026-02-03 13:31:24,313 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 13:32:18] 2026-02-03 13:31:24,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 13:32:18] 2026-02-03 13:31:24,323 | INFO     | did not find any defunct processes belonging to 1056920
[2026-02-03 13:32:18] 2026-02-03 13:31:24,331 | INFO     | did not find any defunct processes belonging to 1056920
[2026-02-03 13:32:18] 2026-02-03 13:31:24,331 | INFO     | ready for new job
[2026-02-03 13:32:18] 2026-02-03 13:31:24,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 13:32:18] 2026-02-03 13:31:24,336 | INFO     | **************************************
[2026-02-03 13:32:18] 2026-02-03 13:31:24,336 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 13:32:18] 2026-02-03 13:31:24,336 | INFO     | **************************************
[2026-02-03 13:32:18] 2026-02-03 13:31:24,337 | INFO     | 
[2026-02-03 13:32:18] 2026-02-03 13:31:24,343 | INFO     | architecture information:
[2026-02-03 13:32:18] 2026-02-03 13:31:24,343 | INFO     | executing command: cat /etc/os-release
[2026-02-03 13:32:18] 2026-02-03 13:31:24,368 | INFO     | cat /etc/os-release:
[2026-02-03 13:32:18] NAME="CentOS Linux"
[2026-02-03 13:32:18] VERSION="7 (Core)"
[2026-02-03 13:32:18] ID="centos"
[2026-02-03 13:32:18] ID_LIKE="rhel fedora"
[2026-02-03 13:32:18] VERSION_ID="7"
[2026-02-03 13:32:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 13:32:18] ANSI_COLOR="0;31"
[2026-02-03 13:32:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 13:32:18] HOME_URL="https://www.centos.org/"
[2026-02-03 13:32:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 13:32:18] 
[2026-02-03 13:32:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 13:32:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 13:32:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 13:32:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 13:32:18] 
[2026-02-03 13:32:18] 2026-02-03 13:31:24,368 | INFO     | **************************************
[2026-02-03 13:32:18] 2026-02-03 13:31:24,876 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/12
[2026-02-03 13:32:18] 2026-02-03 13:31:24,900 | INFO     | sufficient remaining disk space (74389127168 B)
[2026-02-03 13:32:18] 2026-02-03 13:31:24,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 13:32:18] 2026-02-03 13:31:24,901 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 13:32:18] 2026-02-03 13:31:24,901 | INFO     | update_server=False
[2026-02-03 13:32:18] 2026-02-03 13:31:24,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 13:32:18] 2026-02-03 13:31:24,903 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-03 13:32:18] 2026-02-03 13:31:24,904 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 13:32:18] 2026-02-03 13:31:24,904 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 13:32:18] 2026-02-03 13:31:24,904 | INFO     | aborting loop
[2026-02-03 13:32:18] 2026-02-03 13:31:24,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 13:32:18] 2026-02-03 13:31:24,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 13:32:18] 2026-02-03 13:31:24,935 | INFO     | all job control threads have been joined
[2026-02-03 13:32:18] 2026-02-03 13:31:25,201 | INFO     | all payload control threads have been joined
[2026-02-03 13:32:18] 2026-02-03 13:31:25,742 | INFO     | all data control threads have been joined
[2026-02-03 13:32:18] 2026-02-03 13:31:25,909 | INFO     | [job] retrieve thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:25,909 | INFO     | [job] job monitor thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:25,941 | INFO     | [job] control thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 13:32:18] 2026-02-03 13:31:26,126 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,132 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,206 | INFO     | [payload] control thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,269 | INFO     | [data] copytool_in thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,642 | INFO     | [payload] failed_post thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,666 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,688 | INFO     | [payload] validate_post thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,747 | INFO     | [data] control thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:26,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 13:32:18] 2026-02-03 13:31:27,026 | INFO     | [job] validate thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:27,056 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:27,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 13:32:18] 2026-02-03 13:31:28,077 | INFO     | [data] copytool_out thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:28,474 | INFO     | [job] queue monitor thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:31:30,776 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 13:32:18] 2026-02-03 13:32:11,931 | INFO     | [monitor] cgroup control has ended
[2026-02-03 13:32:18] 2026-02-03 13:32:13,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134958774351680)>', '<ExcThread(monitor, started 134958140094208)>']
[2026-02-03 13:32:18] 2026-02-03 13:32:14,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 13:32:18] 2026-02-03 13:32:14,157 | INFO     | [monitor] control thread has ended
[2026-02-03 13:32:18] 2026-02-03 13:32:18,187 | INFO     | all workflow threads have been joined
[2026-02-03 13:32:18] 2026-02-03 13:32:18,188 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 13:32:18] 2026-02-03 13:32:18,188 | INFO     | traces error code: 0
[2026-02-03 13:32:18] 2026-02-03 13:32:18,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 13:32:18] 2026-02-03 13:32:18,353 [wrapper] ==== pilot stdout END ====
[2026-02-03 13:32:18] 2026-02-03 13:32:18,359 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 13:32:18] 2026-02-03 13:32:18,364 [wrapper] pilotpid: 1051047
[2026-02-03 13:32:18] 2026-02-03 13:32:18,371 [wrapper] Pilot exit status: 0
[2026-02-03 13:32:18] 2026-02-03 13:32:18,397 [wrapper] pandaids: 6996650486
[2026-02-03 13:32:18] 2026-02-03 13:32:18,474 [wrapper] cleanup supervisor_pilot 1377602 1051048
[2026-02-03 13:32:18] 2026-02-03 13:32:18,479 [wrapper] Test setup, not cleaning
[2026-02-03 13:32:18] 2026-02-03 13:32:18,484 [wrapper] apfmon messages muted
[2026-02-03 13:32:18] 2026-02-03 13:32:18,490 [wrapper] ==== wrapper stdout END ====
[2026-02-03 13:32:18] 2026-02-03 13:32:18,497 [wrapper] ==== wrapper stderr END ====
[2026-02-03 13:32:18]  *** Error codes and diagnostics ***
[2026-02-03 13:32:18]     "exeErrorCode": 0,
[2026-02-03 13:32:18]     "exeErrorDiag": "",
[2026-02-03 13:32:18]     "pilotErrorCode": 0,
[2026-02-03 13:32:18]     "pilotErrorDiag": "",
[2026-02-03 13:32:18]  *** Listing of results directory ***
[2026-02-03 13:32:18] total 669392
[2026-02-03 13:32:18] -rwx------ 1 boinc boinc     36322 Feb  2 10:55 runpilot2-wrapper.sh
[2026-02-03 13:32:18] -rw-r--r-- 1 boinc boinc      5111 Feb  2 10:55 queuedata.json
[2026-02-03 13:32:18] -rw-r--r-- 1 boinc boinc    584422 Feb  2 10:55 pilot3.tar.gz
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc       100 Feb  3 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 13:32:18] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 11:35 run_atlas
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc       105 Feb  3 11:35 job.xml
[2026-02-03 13:32:18] -rw-r--r-- 2 boinc boinc 498390087 Feb  3 11:35 EVNT.48317869._000327.pool.root.1
[2026-02-03 13:32:18] -rw-r--r-- 2 boinc boinc     15845 Feb  3 11:35 start_atlas.sh
[2026-02-03 13:32:18] drwxrwx--x 2 boinc boinc      4096 Feb  3 11:35 shared
[2026-02-03 13:32:18] -rw-r--r-- 2 boinc boinc    597742 Feb  3 11:35 input.tar.gz
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc      6157 Feb  3 11:35 init_data.xml
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc         0 Feb  3 11:35 boinc_setup_complete
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc         0 Feb  3 11:35 boinc_lockfile
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc      2520 Feb  3 11:35 pandaJob.out
[2026-02-03 13:32:18] -rw------- 1 boinc boinc   1009250 Feb  3 11:35 agis_schedconf.cvmfs.json
[2026-02-03 13:32:18] -rw------- 1 boinc boinc   1511668 Feb  3 11:35 agis_ddmendpoints.agis.ALL.json
[2026-02-03 13:32:18] -rw------- 1 boinc boinc       426 Feb  3 11:35 workernode_map.json
[2026-02-03 13:32:18] drwx------ 5 boinc boinc      4096 Feb  3 11:36 pilot3
[2026-02-03 13:32:18] -rw------- 1 boinc boinc 180185311 Feb  3 13:30 HITS.48317872._018124.pool.root.1
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc       530 Feb  3 13:31 boinc_task_state.xml
[2026-02-03 13:32:18] -rw------- 1 boinc boinc        95 Feb  3 13:31 pilot_heartbeat.json
[2026-02-03 13:32:18] -rw------- 1 boinc boinc      1032 Feb  3 13:31 memory_monitor_summary.json
[2026-02-03 13:32:18] -rw------- 1 boinc boinc    450708 Feb  3 13:31 log.48317872._018124.job.log.tgz.1
[2026-02-03 13:32:18] -rw------- 1 boinc boinc      6340 Feb  3 13:31 heartbeat.json
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc        27 Feb  3 13:32 wrapper_checkpoint.txt
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc      8192 Feb  3 13:32 boinc_mmap_file
[2026-02-03 13:32:18] -rw------- 1 boinc boinc      4572 Feb  3 13:32 pilotlog.txt
[2026-02-03 13:32:18] -rw------- 1 boinc boinc   1017181 Feb  3 13:32 log.48317872._018124.job.log.1
[2026-02-03 13:32:18] -rw------- 1 boinc boinc       357 Feb  3 13:32 output.list
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc       620 Feb  3 13:32 runtime_log
[2026-02-03 13:32:18] -rw------- 1 boinc boinc   1484800 Feb  3 13:32 result.tar.gz
[2026-02-03 13:32:18] -rw------- 1 boinc boinc       653 Feb  3 13:32 tRnLDmal668n9Rq4apOajLDm4fhM0noT9bVooX4SDmp8RKDmEbpUPn.diag
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc      9187 Feb  3 13:32 runtime_log.err
[2026-02-03 13:32:18] -rw-rw-r-- 1 boinc boinc     20600 Feb  3 13:32 stderr.txt
[2026-02-03 13:32:18] HITS file was successfully produced:
[2026-02-03 13:32:18] -rw------- 1 boinc boinc 180185311 Feb  3 13:30 shared/HITS.pool.root.1
[2026-02-03 13:32:18]  *** Contents of shared directory: ***
[2026-02-03 13:32:18] total 664736
[2026-02-03 13:32:18] -rw-r--r-- 2 boinc boinc 498390087 Feb  3 11:35 ATLAS.root_0
[2026-02-03 13:32:18] -rw-r--r-- 2 boinc boinc     15845 Feb  3 11:35 start_atlas.sh
[2026-02-03 13:32:18] -rw-r--r-- 2 boinc boinc    597742 Feb  3 11:35 input.tar.gz
[2026-02-03 13:32:18] -rw------- 1 boinc boinc 180185311 Feb  3 13:30 HITS.pool.root.1
[2026-02-03 13:32:18] -rw------- 1 boinc boinc   1484800 Feb  3 13:32 result.tar.gz
13:32:20 (1045816): run_atlas exited; CPU time 53168.707459
13:32:20 (1045816): called boinc_finish(0)

</stderr_txt>
]]>

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