Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:19:11 (1721979): wrapper (7.7.26015): starting
11:19:11 (1721979): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 11:19:11] Arguments: --nthreads 8
[2026-02-02 11:19:11] Threads: 8
[2026-02-02 11:19:11] Checking for CVMFS
[2026-02-02 11:19:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 11:19:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 11:19:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 11:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 11:19:12] 2.13.3.0 11338 128067 237324 155794 2 129 25204966 32935936 21089 16776704 0 717756111 99.511 942573059 38381 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-02 11:19:12] CVMFS is ok
[2026-02-02 11:19:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 11:19:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 11:19:12] Further information can be found at the LHC@home message board.
[2026-02-02 11:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 11:19:12] Checking for apptainer binary...
[2026-02-02 11:19:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 11:19:12] Running /usr/bin/apptainer --version
[2026-02-02 11:19:12] apptainer version 1.4.5-2.el9
[2026-02-02 11:19:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 11:19:12] c7-3-17.aglt2.org
[2026-02-02 11:19:12] apptainer works
[2026-02-02 11:19:13] Set ATHENA_PROC_NUMBER=8
[2026-02-02 11:19:13] Set ATHENA_CORE_NUMBER=8
[2026-02-02 11:19:13] Starting ATLAS job with PandaID=6993187308
[2026-02-02 11:19:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 13:37:39]  *** The last 200 lines of the pilot log: ***
[2026-02-02 13:37:39] 2026-02-02 18:36:30,904 | INFO     | log transfer has been attempted: DONE
[2026-02-02 13:37:39] 2026-02-02 18:36:30,904 | INFO     | job 6993187308 has finished - writing final server update
[2026-02-02 13:37:39] 2026-02-02 18:36:30,919 | INFO     | total number of processed events: 400 (read)
[2026-02-02 13:37:39] 2026-02-02 18:36:30,986 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6993187308/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 13:37:39] 2026-02-02 18:36:30,986 | INFO     | extracted standard info from prmon json
[2026-02-02 13:37:39] 2026-02-02 18:36:30,987 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 13:37:39] 2026-02-02 18:36:30,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 13:37:39] 2026-02-02 18:36:30,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 13:37:39] 2026-02-02 18:36:30,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 13:37:39] 2026-02-02 18:36:31,000 | INFO     | fitting pss+swap vs Time
[2026-02-02 13:37:39] 2026-02-02 18:36:31,000 | INFO     | sum of square deviations: 746088818.3358212
[2026-02-02 13:37:39] 2026-02-02 18:36:31,018 | INFO     | sum of deviations: -3429746543.335828
[2026-02-02 13:37:39] 2026-02-02 18:36:31,018 | INFO     | mean x: 1770053305.186567
[2026-02-02 13:37:39] 2026-02-02 18:36:31,019 | INFO     | mean y: 2566250.813432836
[2026-02-02 13:37:39] 2026-02-02 18:36:31,019 | INFO     | intersect: 8139444938.427338
[2026-02-02 13:37:39] 2026-02-02 18:36:31,019 | INFO     | chi2: 2.0517870035884096
[2026-02-02 13:37:39] 2026-02-02 18:36:31,019 | INFO     | sum of square deviations: 665678158.3875971
[2026-02-02 13:37:39] 2026-02-02 18:36:31,020 | INFO     | sum of deviations: 5720937164.682167
[2026-02-02 13:37:39] 2026-02-02 18:36:31,020 | INFO     | mean x: 1770053152.7131784
[2026-02-02 13:37:39] 2026-02-02 18:36:31,020 | INFO     | mean y: 2583114.7751937984
[2026-02-02 13:37:39] 2026-02-02 18:36:31,020 | INFO     | intersect: -15209517112.980057
[2026-02-02 13:37:39] 2026-02-02 18:36:31,020 | INFO     | chi2: 1.3646215347388937
[2026-02-02 13:37:39] 2026-02-02 18:36:31,020 | INFO     | current chi2=1.3646215347388937 (change=33.49107230174083 %)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,020 | INFO     | sum of square deviations: 591244005.1209675
[2026-02-02 13:37:39] 2026-02-02 18:36:31,021 | INFO     | sum of deviations: 6172285436.16129
[2026-02-02 13:37:39] 2026-02-02 18:36:31,021 | INFO     | mean x: 1770053000.217742
[2026-02-02 13:37:39] 2026-02-02 18:36:31,021 | INFO     | mean y: 2584040.290322581
[2026-02-02 13:37:39] 2026-02-02 18:36:31,021 | INFO     | intersect: -18475865229.131485
[2026-02-02 13:37:39] 2026-02-02 18:36:31,021 | INFO     | chi2: 1.3663007303064962
[2026-02-02 13:37:39] 2026-02-02 18:36:31,021 | INFO     | current chi2=1.3663007303064962 (change=-0.12305210821136864 %)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,021 | INFO     | right removable region: 123
[2026-02-02 13:37:39] 2026-02-02 18:36:31,021 | INFO     | sum of square deviations: 665622038.3875971
[2026-02-02 13:37:39] 2026-02-02 18:36:31,022 | INFO     | sum of deviations: -22235313628.116283
[2026-02-02 13:37:39] 2026-02-02 18:36:31,022 | INFO     | mean x: 1770053457.7131784
[2026-02-02 13:37:39] 2026-02-02 18:36:31,022 | INFO     | mean y: 2601257.1860465114
[2026-02-02 13:37:39] 2026-02-02 18:36:31,022 | INFO     | intersect: 59131793953.57612
[2026-02-02 13:37:39] 2026-02-02 18:36:31,022 | INFO     | chi2: 0.7265636157104551
[2026-02-02 13:37:39] 2026-02-02 18:36:31,022 | INFO     | current chi2=0.7265636157104551 (change=64.58874072017446 %)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,023 | INFO     | sum of square deviations: 591155370.7419349
[2026-02-02 13:37:39] 2026-02-02 18:36:31,023 | INFO     | sum of deviations: -21175964154.951603
[2026-02-02 13:37:39] 2026-02-02 18:36:31,023 | INFO     | mean x: 1770053610.2419355
[2026-02-02 13:37:39] 2026-02-02 18:36:31,023 | INFO     | mean y: 2599094.7983870967
[2026-02-02 13:37:39] 2026-02-02 18:36:31,023 | INFO     | intersect: 63408251243.03656
[2026-02-02 13:37:39] 2026-02-02 18:36:31,024 | INFO     | chi2: 0.725102503777689
[2026-02-02 13:37:39] 2026-02-02 18:36:31,024 | INFO     | current chi2=0.725102503777689 (change=0.20109896795993337 %)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,024 | INFO     | left removable region: 20
[2026-02-02 13:37:39] 2026-02-02 18:36:31,024 | INFO     | sum of square deviations: 338818916.7184477
[2026-02-02 13:37:39] 2026-02-02 18:36:31,024 | INFO     | sum of deviations: -9485144484.310677
[2026-02-02 13:37:39] 2026-02-02 18:36:31,024 | INFO     | mean x: 1770053579.7961166
[2026-02-02 13:37:39] 2026-02-02 18:36:31,024 | INFO     | mean y: 2618126.223300971
[2026-02-02 13:37:39] 2026-02-02 18:36:31,024 | INFO     | intersect: 49554792225.43109
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | chi2: 0.009972252911415777
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | current memory leak: -27.99 B/s (using 103 data points, chi2=0.01)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | could have reported an average CPU frequency of 3228 MHz (8 samples)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | ..............................
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | . Timing measurements:
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | . get job = 0 s
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | . initial setup = 25 s
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | . payload setup = 15 s
[2026-02-02 13:37:39] 2026-02-02 18:36:31,025 | INFO     | . stage-in = 0 s
[2026-02-02 13:37:39] 2026-02-02 18:36:31,026 | INFO     | . payload execution = 8146 s
[2026-02-02 13:37:39] 2026-02-02 18:36:31,026 | INFO     | . stage-out = 0 s
[2026-02-02 13:37:39] 2026-02-02 18:36:31,026 | INFO     | . log creation = 0 s
[2026-02-02 13:37:39] 2026-02-02 18:36:31,026 | INFO     | ..............................
[2026-02-02 13:37:39] 2026-02-02 18:36:31,095 | INFO     | 
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | job summary report
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | --------------------------------------------------
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | PanDA job id: 6993187308
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | task id: 48431113
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | errors: (none)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | pilot state: finished 
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | transexitcode: 0
[2026-02-02 13:37:39] 2026-02-02 18:36:31,098 | INFO     | exeerrorcode: 0
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | exeerrordiag: 
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | exitcode: 0
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | exitmsg: OK
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | cpuconsumptiontime: 43844 s
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | nevents: 400
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | neventsw: 0
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | pid: 1738284
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | pgrp: 1738284
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | corecount: 8
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | event service: False
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | sizes: {0: 2277209, 1: 2278327, 2: 2278327, 8166: 2315175, 8170: 2315175, 8171: 2315369}
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | --------------------------------------------------
[2026-02-02 13:37:39] 2026-02-02 18:36:31,099 | INFO     | 
[2026-02-02 13:37:39] 2026-02-02 18:36:31,100 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-02 13:37:39] 2026-02-02 18:36:31,282 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,283 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,283 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,283 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,284 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 13:37:39] 2026-02-02 18:36:31,285 | INFO     | job 6993187308 has completed (purged errors)
[2026-02-02 13:37:39] 2026-02-02 18:36:31,285 | INFO     | overall cleanup function is called
[2026-02-02 13:37:39] 2026-02-02 18:36:32,293 | INFO     | --- collectZombieJob: --- 10, [1738284]
[2026-02-02 13:37:39] 2026-02-02 18:36:32,294 | INFO     | zombie collector waiting for pid 1738284
[2026-02-02 13:37:39] 2026-02-02 18:36:32,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 13:37:39] 2026-02-02 18:36:32,294 | INFO     | collected zombie processes
[2026-02-02 13:37:39] 2026-02-02 18:36:32,294 | INFO     | will attempt to kill all subprocesses of pid=1738284
[2026-02-02 13:37:39] 2026-02-02 18:36:32,860 | INFO     | process IDs to be killed: [1738284] (in reverse order)
[2026-02-02 13:37:39] 2026-02-02 18:36:33,011 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 13:37:39] 2026-02-02 18:36:33,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 13:37:39] 2026-02-02 18:36:33,031 | INFO     | did not find any defunct processes belonging to 1738284
[2026-02-02 13:37:39] 2026-02-02 18:36:33,049 | INFO     | did not find any defunct processes belonging to 1738284
[2026-02-02 13:37:39] 2026-02-02 18:36:33,049 | INFO     | ready for new job
[2026-02-02 13:37:39] 2026-02-02 18:36:33,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 13:37:39] 2026-02-02 18:36:33,052 | INFO     | **************************************
[2026-02-02 13:37:39] 2026-02-02 18:36:33,053 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 13:37:39] 2026-02-02 18:36:33,053 | INFO     | **************************************
[2026-02-02 13:37:39] 2026-02-02 18:36:33,053 | INFO     | 
[2026-02-02 13:37:39] 2026-02-02 18:36:33,104 | INFO     | architecture information:
[2026-02-02 13:37:39] 2026-02-02 18:36:33,105 | INFO     | executing command: cat /etc/os-release
[2026-02-02 13:37:39] 2026-02-02 18:36:33,122 | INFO     | cat /etc/os-release:
[2026-02-02 13:37:39] NAME="CentOS Linux"
[2026-02-02 13:37:39] VERSION="7 (Core)"
[2026-02-02 13:37:39] ID="centos"
[2026-02-02 13:37:39] ID_LIKE="rhel fedora"
[2026-02-02 13:37:39] VERSION_ID="7"
[2026-02-02 13:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 13:37:39] ANSI_COLOR="0;31"
[2026-02-02 13:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 13:37:39] HOME_URL="https://www.centos.org/"
[2026-02-02 13:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 13:37:39] 
[2026-02-02 13:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 13:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 13:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 13:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 13:37:39] 
[2026-02-02 13:37:39] 2026-02-02 18:36:33,122 | INFO     | **************************************
[2026-02-02 13:37:39] 2026-02-02 18:36:33,625 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-02 13:37:39] 2026-02-02 18:36:33,640 | INFO     | sufficient remaining disk space (70933020672 B)
[2026-02-02 13:37:39] 2026-02-02 18:36:33,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 13:37:39] 2026-02-02 18:36:33,641 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 13:37:39] 2026-02-02 18:36:33,641 | INFO     | update_server=False
[2026-02-02 13:37:39] 2026-02-02 18:36:33,641 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 13:37:39] 2026-02-02 18:36:33,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:37:39] 2026-02-02 18:36:33,641 | INFO     | aborting loop
[2026-02-02 13:37:39] 2026-02-02 18:36:34,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 13:37:39] 2026-02-02 18:36:34,518 | INFO     | all payload control threads have been joined
[2026-02-02 13:37:39] 2026-02-02 18:36:34,646 | INFO     | [job] retrieve thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:34,646 | INFO     | [job] job monitor thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:34,702 | INFO     | all job control threads have been joined
[2026-02-02 13:37:39] 2026-02-02 18:36:34,744 | INFO     | all data control threads have been joined
[2026-02-02 13:37:39] 2026-02-02 18:36:34,792 | INFO     | [job] validate thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:34,994 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:34,996 | INFO     | [payload] validate_post thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:35,298 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:35,485 | INFO     | [data] copytool_in thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:35,524 | INFO     | [payload] control thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:35,714 | INFO     | [job] control thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:35,723 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:35,750 | INFO     | [data] control thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:35,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 13:37:39] 2026-02-02 18:36:36,101 | INFO     | [payload] failed_post thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:36,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:37:39] 2026-02-02 18:36:36,499 | INFO     | [data] copytool_out thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:37,115 | INFO     | [job] queue monitor thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:39,795 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:36:43,881 | INFO     | job.realtimelogging is not enabled
[2026-02-02 13:37:39] 2026-02-02 18:36:44,888 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 13:37:39] 2026-02-02 18:37:03,664 | INFO     | PID=1727758 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 13:37:39] 2026-02-02 18:37:03,664 | INFO     | .. there are 24 such processes running
[2026-02-02 13:37:39] 2026-02-02 18:37:03,664 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 13:37:39] 2026-02-02 18:37:03,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 13:37:39] 2026-02-02 18:37:03,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 13:37:39] 2026-02-02 18:37:31,959 | INFO     | [monitor] cgroup control has ended
[2026-02-02 13:37:39] 2026-02-02 18:37:32,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249376458560)>', '<ExcThread(monitor, started 140248650602240)>']
[2026-02-02 13:37:39] 2026-02-02 18:37:32,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 13:37:39] 2026-02-02 18:37:32,830 | INFO     | [monitor] control thread has ended
[2026-02-02 13:37:39] 2026-02-02 18:37:37,101 | INFO     | all workflow threads have been joined
[2026-02-02 13:37:39] 2026-02-02 18:37:37,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 13:37:39] 2026-02-02 18:37:37,104 | INFO     | traces error code: 0
[2026-02-02 13:37:39] 2026-02-02 18:37:37,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 13:37:39] 2026-02-02 18:37:39,184 [wrapper] ==== pilot stdout END ====
[2026-02-02 13:37:39] 2026-02-02 18:37:39,187 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 13:37:39] 2026-02-02 18:37:39,191 [wrapper] pilotpid: 1727758
[2026-02-02 13:37:39] 2026-02-02 18:37:39,194 [wrapper] Pilot exit status: 0
[2026-02-02 13:37:39] 2026-02-02 18:37:39,206 [wrapper] pandaids: 6993187308
[2026-02-02 13:37:39] 2026-02-02 18:37:39,284 [wrapper] cleanup supervisor_pilot 2278600 1727759
[2026-02-02 13:37:39] 2026-02-02 18:37:39,286 [wrapper] Test setup, not cleaning
[2026-02-02 13:37:39] 2026-02-02 18:37:39,289 [wrapper] apfmon messages muted
[2026-02-02 13:37:39] 2026-02-02 18:37:39,292 [wrapper] ==== wrapper stdout END ====
[2026-02-02 13:37:39] 2026-02-02 18:37:39,294 [wrapper] ==== wrapper stderr END ====
[2026-02-02 13:37:39]  *** Error codes and diagnostics ***
[2026-02-02 13:37:39]     "exeErrorCode": 0,
[2026-02-02 13:37:39]     "exeErrorDiag": "",
[2026-02-02 13:37:39]     "pilotErrorCode": 0,
[2026-02-02 13:37:39]     "pilotErrorDiag": "",
[2026-02-02 13:37:39]  *** Listing of results directory ***
[2026-02-02 13:37:39] total 896848
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 02:08 pilot3.tar.gz
[2026-02-02 13:37:39] -rwx------. 1 boincer umatlas     36322 Feb  2 02:12 runpilot2-wrapper.sh
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 02:14 queuedata.json
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas       100 Feb  2 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 13:37:39] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 11:19 run_atlas
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas       105 Feb  2 11:19 job.xml
[2026-02-02 13:37:39] -rw-r--r--. 2 boincer umatlas 650310667 Feb  2 11:19 EVNT.48431111._000023.pool.root.1
[2026-02-02 13:37:39] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 11:19 start_atlas.sh
[2026-02-02 13:37:39] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 11:19 shared
[2026-02-02 13:37:39] -rw-r--r--. 2 boincer umatlas    597763 Feb  2 11:19 input.tar.gz
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas         0 Feb  2 11:19 boinc_lockfile
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas      2543 Feb  2 11:19 pandaJob.out
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas        57 Feb  2 11:19 setup.sh.local
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas   1009772 Feb  2 11:19 agis_schedconf.cvmfs.json
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas   1511668 Feb  2 11:19 agis_ddmendpoints.agis.ALL.json
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas       428 Feb  2 11:20 workernode_map.json
[2026-02-02 13:37:39] drwx------. 5 boincer umatlas      4096 Feb  2 11:20 pilot3
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas      6945 Feb  2 13:27 init_data.xml
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas 261096653 Feb  2 13:35 HITS.48431113._001118.pool.root.1
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas       531 Feb  2 13:35 boinc_task_state.xml
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas        95 Feb  2 13:36 pilot_heartbeat.json
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas      1056 Feb  2 13:36 memory_monitor_summary.json
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas    381945 Feb  2 13:36 log.48431113._001118.job.log.tgz.1
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas      6343 Feb  2 13:36 heartbeat.json
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 13:37 boinc_mmap_file
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas        27 Feb  2 13:37 wrapper_checkpoint.txt
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas      4892 Feb  2 13:37 pilotlog.txt
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas   1122438 Feb  2 13:37 log.48431113._001118.job.log.1
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas       357 Feb  2 13:37 output.list
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas       620 Feb  2 13:37 runtime_log
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas   1525760 Feb  2 13:37 result.tar.gz
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas      9336 Feb  2 13:37 runtime_log.err
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas       655 Feb  2 13:37 DmqNDm1H368nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjUSKDmZQ6kIn.diag
[2026-02-02 13:37:39] -rw-r--r--. 1 boincer umatlas     21088 Feb  2 13:37 stderr.txt
[2026-02-02 13:37:39] HITS file was successfully produced:
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas 261096653 Feb  2 13:35 shared/HITS.pool.root.1
[2026-02-02 13:37:39]  *** Contents of shared directory: ***
[2026-02-02 13:37:39] total 892152
[2026-02-02 13:37:39] -rw-r--r--. 2 boincer umatlas 650310667 Feb  2 11:19 ATLAS.root_0
[2026-02-02 13:37:39] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 11:19 start_atlas.sh
[2026-02-02 13:37:39] -rw-r--r--. 2 boincer umatlas    597763 Feb  2 11:19 input.tar.gz
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas 261096653 Feb  2 13:35 HITS.pool.root.1
[2026-02-02 13:37:39] -rw-------. 1 boincer umatlas   1525760 Feb  2 13:37 result.tar.gz
13:37:40 (1721979): run_atlas exited; CPU time 44125.107601
13:37:40 (1721979): called boinc_finish(0)

</stderr_txt>
]]>

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