Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:55:28 (1478321): wrapper (7.7.26015): starting
23:55:28 (1478321): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 23:55:28] Arguments: --nthreads 4
[2026-02-02 23:55:28] Threads: 4
[2026-02-02 23:55:28] Checking for CVMFS
[2026-02-02 23:55:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 23:55:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 23:55:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 23:55:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 23:55:29] 2.13.1.0 1468929 7656 107892 155808 1 188 8657317 10240000 1822 130560 0 9165354 99.994 263815 341 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-02 23:55:29] CVMFS is ok
[2026-02-02 23:55:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 23:55:29] Checking for apptainer binary...
[2026-02-02 23:55:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 23:55:29] Running /usr/bin/apptainer --version
[2026-02-02 23:55:29] apptainer version 1.4.5
[2026-02-02 23:55:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 23:55:29] ellievl
[2026-02-02 23:55:29] apptainer works
[2026-02-02 23:55:29] Set ATHENA_PROC_NUMBER=4
[2026-02-02 23:55:29] Set ATHENA_CORE_NUMBER=4
[2026-02-02 23:55:29] Starting ATLAS job with PandaID=6996649456
[2026-02-02 23:55:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 01:26:07]  *** The last 200 lines of the pilot log: ***
[2026-02-03 01:26:07]  mtime=0
[2026-02-03 01:26:07]  protocol_id=None
[2026-02-03 01:26:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-03 01:26:07]  replicas=None
[2026-02-03 01:26:07]  scope=mc23_13p6TeV
[2026-02-03 01:26:07]  status=None
[2026-02-03 01:26:07]  status_code=0
[2026-02-03 01:26:07]  storage_token=
[2026-02-03 01:26:07]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6996649456/log.48317931._013358.job.log.tgz.1
[2026-02-03 01:26:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/c0/log.48317931._013358.job.log.tgz.1
[2026-02-03 01:26:07]  workdir=None
[2026-02-03 01:26:07] ]
[2026-02-03 01:26:07] 2026-02-03 00:25:28,751 | INFO     | transferring file log.48317931._013358.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6996649456/log.48317931._013358.job.log.tgz.1 to /var/li
[2026-02-03 01:26:07] 2026-02-03 00:25:28,751 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6996649456/log.48317931._013358.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-03 01:26:07] 2026-02-03 00:25:28,780 | INFO     | adding to output.list: log.48317931._013358.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/c0/log.48317931._013358.job.log.tg
[2026-02-03 01:26:07] 2026-02-03 00:25:28,782 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-03 01:26:07] 2026-02-03 00:25:28,782 | INFO     | summary of transferred files:
[2026-02-03 01:26:07] 2026-02-03 00:25:28,782 | INFO     |  -- lfn=log.48317931._013358.job.log.tgz.1, status_code=0, status=transferred
[2026-02-03 01:26:07] 2026-02-03 00:25:28,782 | INFO     | stage-out finished correctly
[2026-02-03 01:26:07] 2026-02-03 00:25:30,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-03 01:26:07] 2026-02-03 00:25:30,552 | INFO     | monitor loop #404: job 0:6996649456 is in state 'finished'
[2026-02-03 01:26:07] 2026-02-03 00:25:30,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-03 01:26:07] 2026-02-03 00:25:30,566 | INFO     | time since job start (5377s) is within the limit (349056.0s)
[2026-02-03 01:26:07] 2026-02-03 00:25:32,572 | INFO     | time since job start (5379s) is within the limit (349056.0s)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,057 | INFO     | monitor loop #405: job 0:6996649456 is in state 'finished'
[2026-02-03 01:26:07] 2026-02-03 00:25:33,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,169 | INFO     | job 6996649456 has state=finished
[2026-02-03 01:26:07] 2026-02-03 00:25:33,170 | INFO     | preparing for final server update for job 6996649456 in state='finished'
[2026-02-03 01:26:07] 2026-02-03 00:25:33,170 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6996649456/jobReport.json
[2026-02-03 01:26:07] 2026-02-03 00:25:33,172 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/2/workernode_map.json
[2026-02-03 01:26:07] 2026-02-03 00:25:33,172 | INFO     | this job has now completed (state=finished)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,172 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,172 | INFO     | log transfer has been attempted: DONE
[2026-02-03 01:26:07] 2026-02-03 00:25:33,172 | INFO     | job 6996649456 has finished - writing final server update
[2026-02-03 01:26:07] 2026-02-03 00:25:33,173 | INFO     | total number of processed events: 400 (read)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,175 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6996649456/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,176 | INFO     | extracted standard info from prmon json
[2026-02-03 01:26:07] 2026-02-03 00:25:33,176 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 01:26:07] 2026-02-03 00:25:33,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 01:26:07] 2026-02-03 00:25:33,176 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 01:26:07] 2026-02-03 00:25:33,176 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 01:26:07] 2026-02-03 00:25:33,177 | INFO     | fitting pss+swap vs Time
[2026-02-03 01:26:07] 2026-02-03 00:25:33,177 | INFO     | sum of square deviations: 164765880.0
[2026-02-03 01:26:07] 2026-02-03 00:25:33,177 | INFO     | sum of deviations: -2386661295.0000005
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | mean x: 1770075728.0
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | mean y: 2349873.5555555555
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | intersect: 25642192474.6848
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | chi2: 0.03342819497526522
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | current memory leak: -14.49 B/s (using 81 data points, chi2=0.03)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | ..............................
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | . Timing measurements:
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | . get job = 0 s
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | . initial setup = 9 s
[2026-02-03 01:26:07] 2026-02-03 00:25:33,178 | INFO     | . payload setup = 10 s
[2026-02-03 01:26:07] 2026-02-03 00:25:33,179 | INFO     | . stage-in = 0 s
[2026-02-03 01:26:07] 2026-02-03 00:25:33,179 | INFO     | . payload execution = 5349 s
[2026-02-03 01:26:07] 2026-02-03 00:25:33,179 | INFO     | . stage-out = 0 s
[2026-02-03 01:26:07] 2026-02-03 00:25:33,179 | INFO     | . log creation = 0 s
[2026-02-03 01:26:07] 2026-02-03 00:25:33,179 | INFO     | ..............................
[2026-02-03 01:26:07] 2026-02-03 00:25:33,213 | INFO     | 
[2026-02-03 01:26:07] 2026-02-03 00:25:33,213 | INFO     | job summary report
[2026-02-03 01:26:07] 2026-02-03 00:25:33,213 | INFO     | --------------------------------------------------
[2026-02-03 01:26:07] 2026-02-03 00:25:33,213 | INFO     | PanDA job id: 6996649456
[2026-02-03 01:26:07] 2026-02-03 00:25:33,213 | INFO     | task id: 48317931
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | errors: (none)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | pilot state: finished 
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | transexitcode: 0
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | exeerrorcode: 0
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | exeerrordiag: 
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | exitcode: 0
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | exitmsg: OK
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | cpuconsumptiontime: 20293 s
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | nevents: 400
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | neventsw: 0
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | pid: 1486754
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | pgrp: 1486754
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | corecount: 4
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | event service: False
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | sizes: {0: 2278229, 11: 2278229, 5363: 2304698, 5364: 2313724, 5365: 2313780, 5368: 2313974}
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | --------------------------------------------------
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | 
[2026-02-03 01:26:07] 2026-02-03 00:25:33,214 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-02-03 01:26:07] 2026-02-03 00:25:33,251 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,251 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,251 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,253 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 01:26:07] 2026-02-03 00:25:33,253 | INFO     | job 6996649456 has completed (purged errors)
[2026-02-03 01:26:07] 2026-02-03 00:25:33,253 | INFO     | overall cleanup function is called
[2026-02-03 01:26:07] 2026-02-03 00:25:34,261 | INFO     | --- collectZombieJob: --- 10, [1486754]
[2026-02-03 01:26:07] 2026-02-03 00:25:34,261 | INFO     | zombie collector waiting for pid 1486754
[2026-02-03 01:26:07] 2026-02-03 00:25:34,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 01:26:07] 2026-02-03 00:25:34,262 | INFO     | collected zombie processes
[2026-02-03 01:26:07] 2026-02-03 00:25:34,262 | INFO     | will attempt to kill all subprocesses of pid=1486754
[2026-02-03 01:26:07] 2026-02-03 00:25:34,464 | INFO     | process IDs to be killed: [1486754] (in reverse order)
[2026-02-03 01:26:07] 2026-02-03 00:25:34,548 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 01:26:07] 2026-02-03 00:25:34,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 01:26:07] 2026-02-03 00:25:34,554 | INFO     | did not find any defunct processes belonging to 1486754
[2026-02-03 01:26:07] 2026-02-03 00:25:34,559 | INFO     | did not find any defunct processes belonging to 1486754
[2026-02-03 01:26:07] 2026-02-03 00:25:34,559 | INFO     | ready for new job
[2026-02-03 01:26:07] 2026-02-03 00:25:34,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 01:26:07] 2026-02-03 00:25:34,562 | INFO     | **************************************
[2026-02-03 01:26:07] 2026-02-03 00:25:34,562 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 01:26:07] 2026-02-03 00:25:34,562 | INFO     | **************************************
[2026-02-03 01:26:07] 2026-02-03 00:25:34,562 | INFO     | 
[2026-02-03 01:26:07] 2026-02-03 00:25:34,563 | INFO     | pilot is running in a VM
[2026-02-03 01:26:07] 2026-02-03 00:25:34,563 | INFO     | architecture information:
[2026-02-03 01:26:07] 2026-02-03 00:25:34,563 | INFO     | executing command: cat /etc/os-release
[2026-02-03 01:26:07] 2026-02-03 00:25:34,582 | INFO     | cat /etc/os-release:
[2026-02-03 01:26:07] NAME="CentOS Linux"
[2026-02-03 01:26:07] VERSION="7 (Core)"
[2026-02-03 01:26:07] ID="centos"
[2026-02-03 01:26:07] ID_LIKE="rhel fedora"
[2026-02-03 01:26:07] VERSION_ID="7"
[2026-02-03 01:26:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 01:26:07] ANSI_COLOR="0;31"
[2026-02-03 01:26:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 01:26:07] HOME_URL="https://www.centos.org/"
[2026-02-03 01:26:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 01:26:07] 
[2026-02-03 01:26:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 01:26:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 01:26:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 01:26:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 01:26:07] 
[2026-02-03 01:26:07] 2026-02-03 00:25:34,582 | INFO     | **************************************
[2026-02-03 01:26:07] 2026-02-03 00:25:35,086 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-02-03 01:26:07] 2026-02-03 00:25:35,105 | INFO     | sufficient remaining disk space (49616519168 B)
[2026-02-03 01:26:07] 2026-02-03 00:25:35,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 01:26:07] 2026-02-03 00:25:35,106 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 01:26:07] 2026-02-03 00:25:35,106 | INFO     | update_server=False
[2026-02-03 01:26:07] 2026-02-03 00:25:35,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 01:26:07] 2026-02-03 00:25:35,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:26:07] 2026-02-03 00:25:35,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 01:26:07] 2026-02-03 00:25:35,165 | INFO     | all data control threads have been joined
[2026-02-03 01:26:07] 2026-02-03 00:25:35,275 | INFO     | all job control threads have been joined
[2026-02-03 01:26:07] 2026-02-03 00:25:35,561 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 01:26:07] 2026-02-03 00:25:35,561 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 01:26:07] 2026-02-03 00:25:35,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:26:07] 2026-02-03 00:25:35,561 | INFO     | will abort loop
[2026-02-03 01:26:07] 2026-02-03 00:25:36,111 | INFO     | [job] retrieve thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:36,112 | INFO     | [job] queue monitor thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:36,171 | INFO     | [data] control thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:36,267 | INFO     | all payload control threads have been joined
[2026-02-03 01:26:07] 2026-02-03 00:25:36,280 | INFO     | [job] control thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:36,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 01:26:07] 2026-02-03 00:25:36,530 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:36,567 | INFO     | [job] job monitor thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:36,898 | INFO     | [payload] failed_post thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:37,089 | INFO     | [job] validate thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:37,113 | INFO     | [data] copytool_out thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:37,273 | INFO     | [payload] control thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:37,306 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:37,317 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:37,364 | INFO     | [payload] validate_post thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:37,587 | INFO     | [data] copytool_in thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:40,313 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:25:43,742 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-02-03 01:26:07] 2026-02-03 00:25:46,029 | INFO     | job.realtimelogging is not enabled
[2026-02-03 01:26:07] 2026-02-03 00:25:47,034 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 01:26:07] 2026-02-03 00:26:00,632 | INFO     | [monitor] cgroup control has ended
[2026-02-03 01:26:07] 2026-02-03 00:26:01,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127473830958912)>', '<ExcThread(monitor, started 127472590898944)>']
[2026-02-03 01:26:07] 2026-02-03 00:26:05,911 | INFO     | PID=1482178 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 01:26:07] 2026-02-03 00:26:05,912 | INFO     | .. there are 3 such processes running
[2026-02-03 01:26:07] 2026-02-03 00:26:05,912 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 01:26:07] 2026-02-03 00:26:05,912 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 01:26:07] 2026-02-03 00:26:05,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 01:26:07] 2026-02-03 00:26:05,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 01:26:07] 2026-02-03 00:26:05,912 | INFO     | [monitor] control thread has ended
[2026-02-03 01:26:07] 2026-02-03 00:26:06,844 | INFO     | all workflow threads have been joined
[2026-02-03 01:26:07] 2026-02-03 00:26:06,844 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 01:26:07] 2026-02-03 00:26:06,845 | INFO     | traces error code: 0
[2026-02-03 01:26:07] 2026-02-03 00:26:06,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 01:26:07] 2026-02-03 00:26:06,940 [wrapper] ==== pilot stdout END ====
[2026-02-03 01:26:07] 2026-02-03 00:26:06,947 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 01:26:07] 2026-02-03 00:26:06,953 [wrapper] pilotpid: 1482178
[2026-02-03 01:26:07] 2026-02-03 00:26:06,959 [wrapper] Pilot exit status: 0
[2026-02-03 01:26:07] 2026-02-03 00:26:06,984 [wrapper] pandaids: 6996649456
[2026-02-03 01:26:07] 2026-02-03 00:26:07,049 [wrapper] cleanup supervisor_pilot 1525201 1482179
[2026-02-03 01:26:07] 2026-02-03 00:26:07,056 [wrapper] Test setup, not cleaning
[2026-02-03 01:26:07] 2026-02-03 00:26:07,063 [wrapper] apfmon messages muted
[2026-02-03 01:26:07] 2026-02-03 00:26:07,070 [wrapper] ==== wrapper stdout END ====
[2026-02-03 01:26:07] 2026-02-03 00:26:07,076 [wrapper] ==== wrapper stderr END ====
[2026-02-03 01:26:07]  *** Error codes and diagnostics ***
[2026-02-03 01:26:07]     "exeErrorCode": 0,
[2026-02-03 01:26:07]     "exeErrorDiag": "",
[2026-02-03 01:26:07]     "pilotErrorCode": 0,
[2026-02-03 01:26:07]     "pilotErrorDiag": "",
[2026-02-03 01:26:07]  *** Listing of results directory ***
[2026-02-03 01:26:07] insgesamt 667280
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc    584422 Feb  2 08:08 pilot3.tar.gz
[2026-02-03 01:26:07] -rwx------ 1 yeti boinc     36322 Feb  2 08:11 runpilot2-wrapper.sh
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc      5111 Feb  2 08:14 queuedata.json
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc       100 Feb  2 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 01:26:07] -rwxr-xr-x 1 yeti boinc      7986 Feb  2 23:55 run_atlas
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc       105 Feb  2 23:55 job.xml
[2026-02-03 01:26:07] -rw-r--r-- 2 yeti boinc 497500920 Feb  2 23:55 EVNT.48317929._000241.pool.root.1
[2026-02-03 01:26:07] -rw-r--r-- 2 yeti boinc    597756 Feb  2 23:55 input.tar.gz
[2026-02-03 01:26:07] -rw-r--r-- 2 yeti boinc     15845 Feb  2 23:55 start_atlas.sh
[2026-02-03 01:26:07] drwxrwx--x 2 yeti boinc      4096 Feb  2 23:55 shared
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc      6558 Feb  2 23:55 init_data.xml
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc         0 Feb  2 23:55 boinc_setup_complete
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc         0 Feb  2 23:55 boinc_lockfile
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc      2513 Feb  2 23:55 pandaJob.out
[2026-02-03 01:26:07] -rw------- 1 yeti boinc        52 Feb  2 23:55 setup.sh.local
[2026-02-03 01:26:07] -rw------- 1 yeti boinc   1009308 Feb  2 23:55 agis_schedconf.cvmfs.json
[2026-02-03 01:26:07] -rw------- 1 yeti boinc   1511668 Feb  2 23:55 agis_ddmendpoints.agis.ALL.json
[2026-02-03 01:26:07] -rw------- 1 yeti boinc       419 Feb  2 23:55 workernode_map.json
[2026-02-03 01:26:07] drwx------ 5 yeti boinc      4096 Feb  2 23:55 pilot3
[2026-02-03 01:26:07] -rw------- 1 yeti boinc 179629901 Feb  3 01:25 HITS.48317931._013358.pool.root.1
[2026-02-03 01:26:07] -rw------- 1 yeti boinc        95 Feb  3 01:25 pilot_heartbeat.json
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc       530 Feb  3 01:25 boinc_task_state.xml
[2026-02-03 01:26:07] -rw------- 1 yeti boinc      1015 Feb  3 01:25 memory_monitor_summary.json
[2026-02-03 01:26:07] -rw------- 1 yeti boinc    317181 Feb  3 01:25 log.48317931._013358.job.log.tgz.1
[2026-02-03 01:26:07] -rw------- 1 yeti boinc      6268 Feb  3 01:25 heartbeat.json
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc        27 Feb  3 01:25 wrapper_checkpoint.txt
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc      8192 Feb  3 01:25 boinc_mmap_file
[2026-02-03 01:26:07] -rw------- 1 yeti boinc      5153 Feb  3 01:26 pilotlog.txt
[2026-02-03 01:26:07] -rw------- 1 yeti boinc    793883 Feb  3 01:26 log.48317931._013358.job.log.1
[2026-02-03 01:26:07] -rw------- 1 yeti boinc       357 Feb  3 01:26 output.list
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc       620 Feb  3 01:26 runtime_log
[2026-02-03 01:26:07] -rw------- 1 yeti boinc   1126400 Feb  3 01:26 result.tar.gz
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc      9536 Feb  3 01:26 runtime_log.err
[2026-02-03 01:26:07] -rw------- 1 yeti boinc       637 Feb  3 01:26 i91MDmSH368n9Rq4apOajLDm4fhM0noT9bVooX4SDm64RKDmmzz0Fm.diag
[2026-02-03 01:26:07] -rw-r--r-- 1 yeti boinc     21400 Feb  3 01:26 stderr.txt
[2026-02-03 01:26:07] HITS file was successfully produced:
[2026-02-03 01:26:07] -rw------- 1 yeti boinc 179629901 Feb  3 01:25 shared/HITS.pool.root.1
[2026-02-03 01:26:07]  *** Contents of shared directory: ***
[2026-02-03 01:26:07] insgesamt 662972
[2026-02-03 01:26:07] -rw-r--r-- 2 yeti boinc 497500920 Feb  2 23:55 ATLAS.root_0
[2026-02-03 01:26:07] -rw-r--r-- 2 yeti boinc    597756 Feb  2 23:55 input.tar.gz
[2026-02-03 01:26:07] -rw-r--r-- 2 yeti boinc     15845 Feb  2 23:55 start_atlas.sh
[2026-02-03 01:26:07] -rw------- 1 yeti boinc 179629901 Feb  3 01:25 HITS.pool.root.1
[2026-02-03 01:26:07] -rw------- 1 yeti boinc   1126400 Feb  3 01:26 result.tar.gz
01:26:09 (1478321): run_atlas exited; CPU time 20516.628820
01:26:09 (1478321): called boinc_finish(0)

</stderr_txt>
]]>

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