Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:40:55 (2004074): wrapper (7.7.26015): starting
08:40:55 (2004074): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 08:40:55] Arguments: --nthreads 3
[2026-02-03 08:40:55] Threads: 3
[2026-02-03 08:40:55] Checking for CVMFS
[2026-02-03 08:41:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 08:42:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 08:42:11] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 08:42:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 08:42:12] 2.13.3.0 2004293 1 29444 155810 3 1 16235999 31457280 0 130560 0 0 100.000 2 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-03 08:42:12] CVMFS is ok
[2026-02-03 08:42:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 08:42:12] Checking for apptainer binary...
[2026-02-03 08:42:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 08:42:12] Running /usr/bin/apptainer --version
[2026-02-03 08:42:12] apptainer version 1.4.5-2.el9
[2026-02-03 08:42:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 08:42:12] testio001
[2026-02-03 08:42:12] apptainer works
[2026-02-03 08:42:12] Set ATHENA_PROC_NUMBER=3
[2026-02-03 08:42:12] Set ATHENA_CORE_NUMBER=3
[2026-02-03 08:42:12] Starting ATLAS job with PandaID=6996649841
[2026-02-03 08:42:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 10:54:12]  *** The last 200 lines of the pilot log: ***
[2026-02-03 10:54:12] 2026-02-03 01:53:23,262 | INFO     | monitor loop #589: job 0:6996649841 is in state 'finished'
[2026-02-03 10:54:12] 2026-02-03 01:53:23,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,231 | INFO     | time since job start (7772s) is within the limit (349056.0s)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,619 | INFO     | job 6996649841 has state=finished
[2026-02-03 10:54:12] 2026-02-03 01:53:25,619 | INFO     | preparing for final server update for job 6996649841 in state='finished'
[2026-02-03 10:54:12] 2026-02-03 01:53:25,619 | INFO     | reading metadata from: /var/lib/boinc/slots/4/PanDA_Pilot-6996649841/jobReport.json
[2026-02-03 10:54:12] 2026-02-03 01:53:25,620 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/4/workernode_map.json
[2026-02-03 10:54:12] 2026-02-03 01:53:25,620 | INFO     | this job has now completed (state=finished)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,620 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,620 | INFO     | log transfer has been attempted: DONE
[2026-02-03 10:54:12] 2026-02-03 01:53:25,620 | INFO     | job 6996649841 has finished - writing final server update
[2026-02-03 10:54:12] 2026-02-03 01:53:25,620 | INFO     | total number of processed events: 400 (read)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,621 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6996649841/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,621 | INFO     | extracted standard info from prmon json
[2026-02-03 10:54:12] 2026-02-03 01:53:25,621 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 10:54:12] 2026-02-03 01:53:25,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 10:54:12] 2026-02-03 01:53:25,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 10:54:12] 2026-02-03 01:53:25,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 10:54:12] 2026-02-03 01:53:25,623 | INFO     | fitting pss+swap vs Time
[2026-02-03 10:54:12] 2026-02-03 01:53:25,623 | INFO     | sum of square deviations: 635143727.8740162
[2026-02-03 10:54:12] 2026-02-03 01:53:25,623 | INFO     | sum of deviations: -13467707704.070864
[2026-02-03 10:54:12] 2026-02-03 01:53:25,623 | INFO     | mean x: 1770079695.031496
[2026-02-03 10:54:12] 2026-02-03 01:53:25,623 | INFO     | mean y: 2399856.2677165354
[2026-02-03 10:54:12] 2026-02-03 01:53:25,623 | INFO     | intersect: 37535504411.02709
[2026-02-03 10:54:12] 2026-02-03 01:53:25,623 | INFO     | chi2: 1.7302054120691364
[2026-02-03 10:54:12] 2026-02-03 01:53:25,623 | INFO     | sum of square deviations: 563041270.3688517
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | sum of deviations: -12461518508.729502
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | mean x: 1770079542.5327868
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | mean y: 2401986.0573770492
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | intersect: 39178711329.6789
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | chi2: 1.726507938512401
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | current chi2=1.726507938512401 (change=0.2137014212846363 %)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | right removable region: 121
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | sum of square deviations: 563038830.3688517
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | sum of deviations: -28984766381.155758
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | mean x: 1770079847.5327868
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | mean y: 2431844.6639344264
[2026-02-03 10:54:12] 2026-02-03 01:53:25,624 | INFO     | intersect: 91124656617.54337
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | chi2: 0.2546865246715043
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | current chi2=0.2546865246715043 (change=85.2799833537148 %)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | sum of square deviations: 496608457.8632484
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | sum of deviations: -23601949619.333336
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | mean x: 1770080000.034188
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | mean y: 2419473.3333333335
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | intersect: 84127726486.32971
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | chi2: 0.24507483505915115
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | current chi2=0.24507483505915115 (change=3.7739293921224806 %)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | left removable region: 20
[2026-02-03 10:54:12] 2026-02-03 01:53:25,625 | INFO     | sum of square deviations: 319458113.8415838
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | sum of deviations: -11174911570.554451
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | mean x: 1770080122.039604
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | mean y: 2391486.1386138615
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | intersect: 61921272176.7
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | chi2: 0.17970627708807546
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | current memory leak: -34.98 B/s (using 101 data points, chi2=0.18)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | could have reported an average CPU frequency of 3654 MHz (8 samples)
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | ..............................
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | . Timing measurements:
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | . get job = 0 s
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | . initial setup = 8 s
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | . payload setup = 4 s
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | . stage-in = 0 s
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | . payload execution = 7747 s
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | . stage-out = 0 s
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | . log creation = 0 s
[2026-02-03 10:54:12] 2026-02-03 01:53:25,626 | INFO     | ..............................
[2026-02-03 10:54:12] 2026-02-03 01:53:26,054 | INFO     | 
[2026-02-03 10:54:12] 2026-02-03 01:53:26,054 | INFO     | job summary report
[2026-02-03 10:54:12] 2026-02-03 01:53:26,054 | INFO     | --------------------------------------------------
[2026-02-03 10:54:12] 2026-02-03 01:53:26,054 | INFO     | PanDA job id: 6996649841
[2026-02-03 10:54:12] 2026-02-03 01:53:26,054 | INFO     | task id: 48317892
[2026-02-03 10:54:12] 2026-02-03 01:53:26,054 | INFO     | errors: (none)
[2026-02-03 10:54:12] 2026-02-03 01:53:26,054 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | pilot state: finished 
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | transexitcode: 0
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | exeerrorcode: 0
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | exeerrordiag: 
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | exitcode: 0
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | exitmsg: OK
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | cpuconsumptiontime: 20810 s
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | nevents: 400
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | neventsw: 0
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | pid: 2012838
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | pgrp: 2012838
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | corecount: 3
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | event service: False
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | sizes: {0: 2277959, 1: 2278221, 11: 2278249, 7755: 2305989, 7756: 2314987, 7759: 2315043, 7762: 2315365}
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | --------------------------------------------------
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | 
[2026-02-03 10:54:12] 2026-02-03 01:53:26,055 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | job 6996649841 has completed (purged errors)
[2026-02-03 10:54:12] 2026-02-03 01:53:26,066 | INFO     | overall cleanup function is called
[2026-02-03 10:54:12] 2026-02-03 01:53:27,072 | INFO     | --- collectZombieJob: --- 10, [2012838]
[2026-02-03 10:54:12] 2026-02-03 01:53:27,072 | INFO     | zombie collector waiting for pid 2012838
[2026-02-03 10:54:12] 2026-02-03 01:53:27,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 10:54:12] 2026-02-03 01:53:27,072 | INFO     | collected zombie processes
[2026-02-03 10:54:12] 2026-02-03 01:53:27,072 | INFO     | will attempt to kill all subprocesses of pid=2012838
[2026-02-03 10:54:12] 2026-02-03 01:53:27,103 | INFO     | process IDs to be killed: [2012838] (in reverse order)
[2026-02-03 10:54:12] 2026-02-03 01:53:27,121 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 10:54:12] 2026-02-03 01:53:27,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 10:54:12] 2026-02-03 01:53:27,122 | INFO     | did not find any defunct processes belonging to 2012838
[2026-02-03 10:54:12] 2026-02-03 01:53:27,123 | INFO     | did not find any defunct processes belonging to 2012838
[2026-02-03 10:54:12] 2026-02-03 01:53:27,123 | INFO     | ready for new job
[2026-02-03 10:54:12] 2026-02-03 01:53:27,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 10:54:12] 2026-02-03 01:53:27,124 | INFO     | **************************************
[2026-02-03 10:54:12] 2026-02-03 01:53:27,124 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 10:54:12] 2026-02-03 01:53:27,124 | INFO     | **************************************
[2026-02-03 10:54:12] 2026-02-03 01:53:27,124 | INFO     | 
[2026-02-03 10:54:12] 2026-02-03 01:53:27,124 | INFO     | architecture information:
[2026-02-03 10:54:12] 2026-02-03 01:53:27,125 | INFO     | executing command: cat /etc/os-release
[2026-02-03 10:54:12] 2026-02-03 01:53:27,132 | INFO     | cat /etc/os-release:
[2026-02-03 10:54:12] NAME="CentOS Linux"
[2026-02-03 10:54:12] VERSION="7 (Core)"
[2026-02-03 10:54:12] ID="centos"
[2026-02-03 10:54:12] ID_LIKE="rhel fedora"
[2026-02-03 10:54:12] VERSION_ID="7"
[2026-02-03 10:54:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 10:54:12] ANSI_COLOR="0;31"
[2026-02-03 10:54:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 10:54:12] HOME_URL="https://www.centos.org/"
[2026-02-03 10:54:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 10:54:12] 
[2026-02-03 10:54:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 10:54:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 10:54:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 10:54:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 10:54:12] 
[2026-02-03 10:54:12] 2026-02-03 01:53:27,132 | INFO     | **************************************
[2026-02-03 10:54:12] 2026-02-03 01:53:27,635 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-02-03 10:54:12] 2026-02-03 01:53:27,643 | INFO     | sufficient remaining disk space (132821024768 B)
[2026-02-03 10:54:12] 2026-02-03 01:53:27,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 10:54:12] 2026-02-03 01:53:27,643 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 10:54:12] 2026-02-03 01:53:27,643 | INFO     | update_server=False
[2026-02-03 10:54:12] 2026-02-03 01:53:27,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 10:54:12] 2026-02-03 01:53:27,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 10:54:12] 2026-02-03 01:53:27,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 10:54:12] 2026-02-03 01:53:27,644 | INFO     | aborting loop
[2026-02-03 10:54:12] 2026-02-03 01:53:28,023 | INFO     | all payload control threads have been joined
[2026-02-03 10:54:12] 2026-02-03 01:53:28,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 10:54:12] 2026-02-03 01:53:28,429 | INFO     | all data control threads have been joined
[2026-02-03 10:54:12] 2026-02-03 01:53:28,648 | INFO     | [job] retrieve thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:28,649 | INFO     | [job] job monitor thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:28,649 | INFO     | [job] validate thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:28,649 | INFO     | [job] queue monitor thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:29,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 10:54:12] 2026-02-03 01:53:29,029 | INFO     | [payload] control thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:29,073 | INFO     | all job control threads have been joined
[2026-02-03 10:54:12] 2026-02-03 01:53:29,127 | INFO     | [payload] validate_post thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:29,162 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:29,170 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:29,280 | INFO     | [payload] failed_post thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:29,285 | INFO     | [data] copytool_in thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:29,434 | INFO     | [data] control thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:29,993 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:30,068 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:30,079 | INFO     | [job] control thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:30,110 | INFO     | [data] copytool_out thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:33,010 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 10:54:12] 2026-02-03 01:53:58,329 | INFO     | PID=2008359 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 10:54:12] 2026-02-03 01:53:58,330 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 10:54:12] 2026-02-03 01:53:58,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 10:54:12] 2026-02-03 01:53:58,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 10:54:12] 2026-02-03 01:54:06,111 | INFO     | [monitor] cgroup control has ended
[2026-02-03 10:54:12] 2026-02-03 01:54:07,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813364115264)>', '<ExcThread(monitor, started 139812912748288)>']
[2026-02-03 10:54:12] 2026-02-03 01:54:07,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 10:54:12] 2026-02-03 01:54:07,375 | INFO     | [monitor] control thread has ended
[2026-02-03 10:54:12] 2026-02-03 01:54:12,141 | INFO     | all workflow threads have been joined
[2026-02-03 10:54:12] 2026-02-03 01:54:12,142 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 10:54:12] 2026-02-03 01:54:12,142 | INFO     | traces error code: 0
[2026-02-03 10:54:12] 2026-02-03 01:54:12,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 10:54:12] 2026-02-03 01:54:12,202 [wrapper] ==== pilot stdout END ====
[2026-02-03 10:54:12] 2026-02-03 01:54:12,203 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 10:54:12] 2026-02-03 01:54:12,205 [wrapper] pilotpid: 2008359
[2026-02-03 10:54:12] 2026-02-03 01:54:12,206 [wrapper] Pilot exit status: 0
[2026-02-03 10:54:12] 2026-02-03 01:54:12,211 [wrapper] pandaids: 6996649841
[2026-02-03 10:54:12] 2026-02-03 01:54:12,223 [wrapper] cleanup supervisor_pilot 2017712 2008360
[2026-02-03 10:54:12] 2026-02-03 01:54:12,224 [wrapper] Test setup, not cleaning
[2026-02-03 10:54:12] 2026-02-03 01:54:12,226 [wrapper] apfmon messages muted
[2026-02-03 10:54:12] 2026-02-03 01:54:12,227 [wrapper] ==== wrapper stdout END ====
[2026-02-03 10:54:12] 2026-02-03 01:54:12,228 [wrapper] ==== wrapper stderr END ====
[2026-02-03 10:54:12]  *** Error codes and diagnostics ***
[2026-02-03 10:54:12]     "exeErrorCode": 0,
[2026-02-03 10:54:12]     "exeErrorDiag": "",
[2026-02-03 10:54:12]     "pilotErrorCode": 0,
[2026-02-03 10:54:12]     "pilotErrorDiag": "",
[2026-02-03 10:54:12]  *** Listing of results directory ***
[2026-02-03 10:54:12] total 667480
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc      5111 Feb  2 19:55 queuedata.json
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc    584422 Feb  2 19:55 pilot3.tar.gz
[2026-02-03 10:54:12] -rwx------. 1 boinc boinc     36322 Feb  2 19:56 runpilot2-wrapper.sh
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc       100 Feb  3 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 10:54:12] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 08:40 run_atlas
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc       105 Feb  3 08:40 job.xml
[2026-02-03 10:54:12] drwxrwx--x. 2 boinc boinc        68 Feb  3 08:40 shared
[2026-02-03 10:54:12] -rw-r--r--. 2 boinc boinc    597758 Feb  3 08:40 input.tar.gz
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc      9312 Feb  3 08:40 init_data.xml
[2026-02-03 10:54:12] -rw-r--r--. 2 boinc boinc 491025322 Feb  3 08:40 EVNT.48317889._000186.pool.root.1
[2026-02-03 10:54:12] -rw-r--r--. 2 boinc boinc     15845 Feb  3 08:40 start_atlas.sh
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc         0 Feb  3 08:40 boinc_lockfile
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc      2521 Feb  3 08:42 pandaJob.out
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc   1009316 Feb  3 08:43 agis_schedconf.cvmfs.json
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc   1511668 Feb  3 08:43 agis_ddmendpoints.agis.ALL.json
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc       426 Feb  3 08:43 workernode_map.json
[2026-02-03 10:54:12] drwx------. 5 boinc boinc      4096 Feb  3 08:43 pilot3
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc 185725670 Feb  3 10:52 HITS.48317892._009696.pool.root.1
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc       530 Feb  3 10:53 boinc_task_state.xml
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc      1009 Feb  3 10:53 memory_monitor_summary.json
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc    306459 Feb  3 10:53 log.48317892._009696.job.log.tgz.1
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc      6325 Feb  3 10:53 heartbeat.json
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc        95 Feb  3 10:53 pilot_heartbeat.json
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc      8192 Feb  3 10:54 boinc_mmap_file
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc        27 Feb  3 10:54 wrapper_checkpoint.txt
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc      4745 Feb  3 10:54 pilotlog.txt
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc   1103636 Feb  3 10:54 log.48317892._009696.job.log.1
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc       357 Feb  3 10:54 output.list
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc       620 Feb  3 10:54 runtime_log
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc   1423360 Feb  3 10:54 result.tar.gz
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc      8774 Feb  3 10:54 runtime_log.err
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc       643 Feb  3 10:54 PlvMDmjm668nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXWSKDmPXk6On.diag
[2026-02-03 10:54:12] -rw-r--r--. 1 boinc boinc     21024 Feb  3 10:54 stderr.txt
[2026-02-03 10:54:12] HITS file was successfully produced:
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc 185725670 Feb  3 10:52 shared/HITS.pool.root.1
[2026-02-03 10:54:12]  *** Contents of shared directory: ***
[2026-02-03 10:54:12] total 662888
[2026-02-03 10:54:12] -rw-r--r--. 2 boinc boinc    597758 Feb  3 08:40 input.tar.gz
[2026-02-03 10:54:12] -rw-r--r--. 2 boinc boinc 491025322 Feb  3 08:40 ATLAS.root_0
[2026-02-03 10:54:12] -rw-r--r--. 2 boinc boinc     15845 Feb  3 08:40 start_atlas.sh
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc 185725670 Feb  3 10:52 HITS.pool.root.1
[2026-02-03 10:54:12] -rw-------. 1 boinc boinc   1423360 Feb  3 10:54 result.tar.gz
10:54:13 (2004074): run_atlas exited; CPU time 20843.606595
10:54:13 (2004074): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN