Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:53:35 (3195041): wrapper (7.7.26015): starting
09:53:35 (3195041): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 09:53:35] Arguments: --nthreads 8
[2026-02-02 09:53:35] Threads: 8
[2026-02-02 09:53:35] Checking for CVMFS
[2026-02-02 09:53:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 09:53:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 09:53:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 09:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 09:53:36] 2.13.3.0 779065 51633 115252 155789 3 188 21782553 39288833 3664 16776704 0 56134252 99.983 2303474 32597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 09:53:36] CVMFS is ok
[2026-02-02 09:53:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 09:53:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 09:53:36] Further information can be found at the LHC@home message board.
[2026-02-02 09:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 09:53:36] Checking for apptainer binary...
[2026-02-02 09:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 09:53:36] Running /usr/bin/apptainer --version
[2026-02-02 09:53:36] apptainer version 1.4.5-2.el9
[2026-02-02 09:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 09:53:36] c-210-16.aglt2.org
[2026-02-02 09:53:36] apptainer works
[2026-02-02 09:53:36] Set ATHENA_PROC_NUMBER=8
[2026-02-02 09:53:36] Set ATHENA_CORE_NUMBER=8
[2026-02-02 09:53:36] Starting ATLAS job with PandaID=6993187104
[2026-02-02 09:53:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 12:13:10]  *** The last 200 lines of the pilot log: ***
[2026-02-02 12:13:10] 2026-02-02 17:12:19,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 12:13:10] 2026-02-02 17:12:19,059 | INFO     | fitting pss+swap vs Time
[2026-02-02 12:13:10] 2026-02-02 17:12:19,059 | INFO     | sum of square deviations: 779958810.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,059 | INFO     | sum of deviations: 18949023956.999996
[2026-02-02 12:13:10] 2026-02-02 17:12:19,059 | INFO     | mean x: 1770048168.5
[2026-02-02 12:13:10] 2026-02-02 17:12:19,060 | INFO     | mean y: 2543007.1470588236
[2026-02-02 12:13:10] 2026-02-02 17:12:19,060 | INFO     | intersect: -43000606287.30154
[2026-02-02 12:13:10] 2026-02-02 17:12:19,060 | INFO     | chi2: 1.4036671423719265
[2026-02-02 12:13:10] 2026-02-02 17:12:19,060 | INFO     | sum of square deviations: 697054930.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,060 | INFO     | sum of deviations: 17964195976.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,060 | INFO     | mean x: 1770048016.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,061 | INFO     | mean y: 2541194.282442748
[2026-02-02 12:13:10] 2026-02-02 17:12:19,061 | INFO     | intersect: -45614365132.38823
[2026-02-02 12:13:10] 2026-02-02 17:12:19,061 | INFO     | chi2: 1.4055415423005937
[2026-02-02 12:13:10] 2026-02-02 17:12:19,061 | INFO     | current chi2=1.4055415423005937 (change=-0.13353592686510074 %)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,061 | INFO     | right removable region: 130
[2026-02-02 12:13:10] 2026-02-02 17:12:19,061 | INFO     | sum of square deviations: 697054930.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,061 | INFO     | sum of deviations: -1536091813.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,062 | INFO     | mean x: 1770048321.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,062 | INFO     | mean y: 2580074.717557252
[2026-02-02 12:13:10] 2026-02-02 17:12:19,062 | INFO     | intersect: 3903214899.153124
[2026-02-02 12:13:10] 2026-02-02 17:12:19,062 | INFO     | chi2: 0.0370476632245511
[2026-02-02 12:13:10] 2026-02-02 17:12:19,062 | INFO     | current chi2=0.0370476632245511 (change=97.36065181650204 %)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,062 | INFO     | sum of square deviations: 620244187.5
[2026-02-02 12:13:10] 2026-02-02 17:12:19,062 | INFO     | sum of deviations: -513671392.4999995
[2026-02-02 12:13:10] 2026-02-02 17:12:19,063 | INFO     | mean x: 1770048473.5
[2026-02-02 12:13:10] 2026-02-02 17:12:19,063 | INFO     | mean y: 2577952.5317460317
[2026-02-02 12:13:10] 2026-02-02 17:12:19,063 | INFO     | intersect: 1468489737.759469
[2026-02-02 12:13:10] 2026-02-02 17:12:19,063 | INFO     | chi2: 0.021547769729530576
[2026-02-02 12:13:10] 2026-02-02 17:12:19,063 | INFO     | current chi2=0.021547769729530576 (change=41.83770890237662 %)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,063 | INFO     | sum of square deviations: 549294020.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,063 | INFO     | sum of deviations: 2529182365.9999995
[2026-02-02 12:13:10] 2026-02-02 17:12:19,063 | INFO     | mean x: 1770048626.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,064 | INFO     | mean y: 2571401.826446281
[2026-02-02 12:13:10] 2026-02-02 17:12:19,064 | INFO     | intersect: -8147482319.569843
[2026-02-02 12:13:10] 2026-02-02 17:12:19,064 | INFO     | chi2: 0.00016393099381944686
[2026-02-02 12:13:10] 2026-02-02 17:12:19,064 | INFO     | current chi2=0.00016393099381944686 (change=99.2392205974116 %)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,064 | INFO     | sum of square deviations: 483971865.0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,064 | INFO     | sum of deviations: 2169288496.4999995
[2026-02-02 12:13:10] 2026-02-02 17:12:19,064 | INFO     | mean x: 1770048778.5
[2026-02-02 12:13:10] 2026-02-02 17:12:19,064 | INFO     | mean y: 2572240.7327586208
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | intersect: -7931249394.630127
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | chi2: 0.00014981942026745897
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | current chi2=0.00014981942026745897 (change=8.608240103473253 %)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | left removable region: 40
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | sum of square deviations: 226022842.5
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | sum of deviations: 1012356427.0000001
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | mean x: 1770049205.5
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | mean y: 2573839.1333333333
[2026-02-02 12:13:10] 2026-02-02 17:12:19,065 | INFO     | intersect: -7925477456.36424
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | chi2: 0.00012593638619646415
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | current memory leak: 4.48 B/s (using 90 data points, chi2=0.00)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | could have reported an average CPU frequency of 2600 MHz (8 samples)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | ..............................
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | . Timing measurements:
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | . get job = 0 s
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | . initial setup = 6 s
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | . payload setup = 5 s
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | . stage-in = 0 s
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | . payload execution = 8286 s
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | . stage-out = 0 s
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | . log creation = 0 s
[2026-02-02 12:13:10] 2026-02-02 17:12:19,066 | INFO     | ..............................
[2026-02-02 12:13:10] 2026-02-02 17:12:19,117 | INFO     | 
[2026-02-02 12:13:10] 2026-02-02 17:12:19,117 | INFO     | job summary report
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | --------------------------------------------------
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | PanDA job id: 6993187104
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | task id: 48431113
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | errors: (none)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | pilot state: finished 
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | transexitcode: 0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | exeerrorcode: 0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,118 | INFO     | exeerrordiag: 
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | exitcode: 0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | exitmsg: OK
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | cpuconsumptiontime: 62266 s
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | nevents: 400
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | neventsw: 0
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | pid: 3204349
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | pgrp: 3204349
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | corecount: 8
[2026-02-02 12:13:10] 2026-02-02 17:12:19,119 | INFO     | event service: False
[2026-02-02 12:13:10] 2026-02-02 17:12:19,120 | INFO     | sizes: {0: 2277207, 1: 2278325, 12: 2278325, 8295: 2306195, 8297: 2315387}
[2026-02-02 12:13:10] 2026-02-02 17:12:19,120 | INFO     | --------------------------------------------------
[2026-02-02 12:13:10] 2026-02-02 17:12:19,120 | INFO     | 
[2026-02-02 12:13:10] 2026-02-02 17:12:19,120 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-02 12:13:10] 2026-02-02 17:12:19,132 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,132 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,132 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,133 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,134 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 12:13:10] 2026-02-02 17:12:19,135 | INFO     | job 6993187104 has completed (purged errors)
[2026-02-02 12:13:10] 2026-02-02 17:12:19,135 | INFO     | overall cleanup function is called
[2026-02-02 12:13:10] 2026-02-02 17:12:20,143 | INFO     | --- collectZombieJob: --- 10, [3204349]
[2026-02-02 12:13:10] 2026-02-02 17:12:20,143 | INFO     | zombie collector waiting for pid 3204349
[2026-02-02 12:13:10] 2026-02-02 17:12:20,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 12:13:10] 2026-02-02 17:12:20,144 | INFO     | collected zombie processes
[2026-02-02 12:13:10] 2026-02-02 17:12:20,144 | INFO     | will attempt to kill all subprocesses of pid=3204349
[2026-02-02 12:13:10] 2026-02-02 17:12:20,344 | INFO     | process IDs to be killed: [3204349] (in reverse order)
[2026-02-02 12:13:10] 2026-02-02 17:12:20,385 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 12:13:10] 2026-02-02 17:12:20,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 12:13:10] 2026-02-02 17:12:20,391 | INFO     | did not find any defunct processes belonging to 3204349
[2026-02-02 12:13:10] 2026-02-02 17:12:20,396 | INFO     | did not find any defunct processes belonging to 3204349
[2026-02-02 12:13:10] 2026-02-02 17:12:20,397 | INFO     | ready for new job
[2026-02-02 12:13:10] 2026-02-02 17:12:20,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 12:13:10] 2026-02-02 17:12:20,399 | INFO     | **************************************
[2026-02-02 12:13:10] 2026-02-02 17:12:20,399 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 12:13:10] 2026-02-02 17:12:20,399 | INFO     | **************************************
[2026-02-02 12:13:10] 2026-02-02 17:12:20,399 | INFO     | 
[2026-02-02 12:13:10] 2026-02-02 17:12:20,401 | INFO     | architecture information:
[2026-02-02 12:13:10] 2026-02-02 17:12:20,401 | INFO     | executing command: cat /etc/os-release
[2026-02-02 12:13:10] 2026-02-02 17:12:20,414 | INFO     | cat /etc/os-release:
[2026-02-02 12:13:10] NAME="CentOS Linux"
[2026-02-02 12:13:10] VERSION="7 (Core)"
[2026-02-02 12:13:10] ID="centos"
[2026-02-02 12:13:10] ID_LIKE="rhel fedora"
[2026-02-02 12:13:10] VERSION_ID="7"
[2026-02-02 12:13:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 12:13:10] ANSI_COLOR="0;31"
[2026-02-02 12:13:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 12:13:10] HOME_URL="https://www.centos.org/"
[2026-02-02 12:13:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 12:13:10] 
[2026-02-02 12:13:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 12:13:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 12:13:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 12:13:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 12:13:10] 
[2026-02-02 12:13:10] 2026-02-02 17:12:20,414 | INFO     | **************************************
[2026-02-02 12:13:10] 2026-02-02 17:12:20,917 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-02 12:13:10] 2026-02-02 17:12:20,929 | INFO     | sufficient remaining disk space (48616177664 B)
[2026-02-02 12:13:10] 2026-02-02 17:12:20,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 12:13:10] 2026-02-02 17:12:20,930 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 12:13:10] 2026-02-02 17:12:20,930 | INFO     | update_server=False
[2026-02-02 12:13:10] 2026-02-02 17:12:20,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 12:13:10] 2026-02-02 17:12:20,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 12:13:10] 2026-02-02 17:12:20,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 12:13:10] 2026-02-02 17:12:21,007 | INFO     | all payload control threads have been joined
[2026-02-02 12:13:10] 2026-02-02 17:12:21,066 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 12:13:10] 2026-02-02 17:12:21,067 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 12:13:10] 2026-02-02 17:12:21,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 12:13:10] 2026-02-02 17:12:21,067 | INFO     | will abort loop
[2026-02-02 12:13:10] 2026-02-02 17:12:21,915 | INFO     | all data control threads have been joined
[2026-02-02 12:13:10] 2026-02-02 17:12:21,936 | INFO     | [job] retrieve thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:21,936 | INFO     | [job] queue monitor thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:21,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 12:13:10] 2026-02-02 17:12:22,009 | INFO     | [payload] control thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:22,072 | INFO     | [job] job monitor thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:22,161 | INFO     | [data] copytool_in thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:22,239 | INFO     | all job control threads have been joined
[2026-02-02 12:13:10] 2026-02-02 17:12:22,390 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:22,771 | INFO     | [payload] validate_post thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:22,895 | INFO     | [job] validate thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:22,916 | INFO     | [data] control thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:23,098 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:23,155 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:23,218 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:23,240 | INFO     | [job] control thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:23,271 | INFO     | [payload] failed_post thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:23,964 | INFO     | [data] copytool_out thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:24,936 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 12:13:10] 2026-02-02 17:12:51,655 | INFO     | PID=3198755 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 12:13:10] 2026-02-02 17:12:51,655 | INFO     | .. there are 5 such processes running
[2026-02-02 12:13:10] 2026-02-02 17:12:51,656 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 12:13:10] 2026-02-02 17:12:51,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 12:13:10] 2026-02-02 17:12:51,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 12:13:10] 2026-02-02 17:13:03,229 | INFO     | [monitor] cgroup control has ended
[2026-02-02 12:13:10] 2026-02-02 17:13:05,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804921202496)>', '<ExcThread(monitor, started 139804398315264)>']
[2026-02-02 12:13:10] 2026-02-02 17:13:05,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 12:13:10] 2026-02-02 17:13:05,721 | INFO     | [monitor] control thread has ended
[2026-02-02 12:13:10] 2026-02-02 17:13:10,228 | INFO     | all workflow threads have been joined
[2026-02-02 12:13:10] 2026-02-02 17:13:10,228 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 12:13:10] 2026-02-02 17:13:10,229 | INFO     | traces error code: 0
[2026-02-02 12:13:10] 2026-02-02 17:13:10,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 12:13:10] 2026-02-02 17:13:10,327 [wrapper] ==== pilot stdout END ====
[2026-02-02 12:13:10] 2026-02-02 17:13:10,329 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 12:13:10] 2026-02-02 17:13:10,331 [wrapper] pilotpid: 3198755
[2026-02-02 12:13:10] 2026-02-02 17:13:10,333 [wrapper] Pilot exit status: 0
[2026-02-02 12:13:10] 2026-02-02 17:13:10,341 [wrapper] pandaids: 6993187104
[2026-02-02 12:13:10] 2026-02-02 17:13:10,368 [wrapper] cleanup supervisor_pilot 3421700 3198756
[2026-02-02 12:13:10] 2026-02-02 17:13:10,370 [wrapper] Test setup, not cleaning
[2026-02-02 12:13:10] 2026-02-02 17:13:10,372 [wrapper] apfmon messages muted
[2026-02-02 12:13:10] 2026-02-02 17:13:10,374 [wrapper] ==== wrapper stdout END ====
[2026-02-02 12:13:10] 2026-02-02 17:13:10,376 [wrapper] ==== wrapper stderr END ====
[2026-02-02 12:13:10]  *** Error codes and diagnostics ***
[2026-02-02 12:13:10]     "exeErrorCode": 0,
[2026-02-02 12:13:10]     "exeErrorDiag": "",
[2026-02-02 12:13:10]     "pilotErrorCode": 0,
[2026-02-02 12:13:10]     "pilotErrorDiag": "",
[2026-02-02 12:13:10]  *** Listing of results directory ***
[2026-02-02 12:13:10] total 897528
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 02:08 pilot3.tar.gz
[2026-02-02 12:13:10] -rwx------. 1 boincer umatlas     36322 Feb  2 02:12 runpilot2-wrapper.sh
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 02:14 queuedata.json
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas       100 Feb  2 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 12:13:10] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 09:53 run_atlas
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas       105 Feb  2 09:53 job.xml
[2026-02-02 12:13:10] -rw-r--r--. 2 boincer umatlas 652893458 Feb  2 09:53 EVNT.48431111._000020.pool.root.1
[2026-02-02 12:13:10] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 09:53 start_atlas.sh
[2026-02-02 12:13:10] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 09:53 shared
[2026-02-02 12:13:10] -rw-r--r--. 2 boincer umatlas    597763 Feb  2 09:53 input.tar.gz
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas         0 Feb  2 09:53 boinc_lockfile
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas      2542 Feb  2 09:53 pandaJob.out
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas        57 Feb  2 09:53 setup.sh.local
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas   1009833 Feb  2 09:53 agis_schedconf.cvmfs.json
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas   1511668 Feb  2 09:53 agis_ddmendpoints.agis.ALL.json
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas       434 Feb  2 09:53 workernode_map.json
[2026-02-02 12:13:10] drwx------. 5 boincer umatlas      4096 Feb  2 09:53 pilot3
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas       530 Feb  2 12:11 boinc_task_state.xml
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas 259048387 Feb  2 12:11 HITS.48431113._000978.pool.root.1
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas      6660 Feb  2 12:11 init_data.xml
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas      1036 Feb  2 12:12 memory_monitor_summary.json
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas    399476 Feb  2 12:12 log.48431113._000978.job.log.tgz.1
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas      6365 Feb  2 12:12 heartbeat.json
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas        95 Feb  2 12:12 pilot_heartbeat.json
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas        27 Feb  2 12:13 wrapper_checkpoint.txt
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 12:13 boinc_mmap_file
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas      5005 Feb  2 12:13 pilotlog.txt
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas   1191104 Feb  2 12:13 log.48431113._000978.job.log.1
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas       357 Feb  2 12:13 output.list
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas       620 Feb  2 12:13 runtime_log
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas   1607680 Feb  2 12:13 result.tar.gz
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas      9341 Feb  2 12:13 runtime_log.err
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas       652 Feb  2 12:13 oBXNDmqH368n9Rq4apOajLDm4fhM0noT9bVooX4SDmA7RKDmmJ2O2m.diag
[2026-02-02 12:13:10] -rw-r--r--. 1 boincer umatlas     20908 Feb  2 12:13 stderr.txt
[2026-02-02 12:13:10] HITS file was successfully produced:
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas 259048387 Feb  2 12:11 shared/HITS.pool.root.1
[2026-02-02 12:13:10]  *** Contents of shared directory: ***
[2026-02-02 12:13:10] total 892752
[2026-02-02 12:13:10] -rw-r--r--. 2 boincer umatlas 652893458 Feb  2 09:53 ATLAS.root_0
[2026-02-02 12:13:10] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 09:53 start_atlas.sh
[2026-02-02 12:13:10] -rw-r--r--. 2 boincer umatlas    597763 Feb  2 09:53 input.tar.gz
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas 259048387 Feb  2 12:11 HITS.pool.root.1
[2026-02-02 12:13:10] -rw-------. 1 boincer umatlas   1607680 Feb  2 12:13 result.tar.gz
12:13:11 (3195041): run_atlas exited; CPU time 62463.520909
12:13:11 (3195041): called boinc_finish(0)

</stderr_txt>
]]>

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