Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:52:45 (7402): wrapper (7.7.26015): starting
09:52:45 (7402): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 09:52:45] Arguments: --nthreads 12
[2026-02-02 09:52:45] Threads: 12
[2026-02-02 09:52:45] Checking for CVMFS
[2026-02-02 09:52:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 09:52:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 09:52:45] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 09:52:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 09:52:45] 2.11.2.0 3103 175721 101888 155789 3 50 15604651 20275200 1 130560 0 74952410 99.922 9329022 30575 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 09:52:45] CVMFS is ok
[2026-02-02 09:52:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 09:52:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 09:52:45] Further information can be found at the LHC@home message board.
[2026-02-02 09:52:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 09:52:45] Checking for apptainer binary...
[2026-02-02 09:52:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 09:52:45] Running /usr/bin/apptainer --version
[2026-02-02 09:52:45] apptainer version 1.3.2-1.el7
[2026-02-02 09:52:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 09:52:47] c-115-41.aglt2.org
[2026-02-02 09:52:47] apptainer works
[2026-02-02 09:52:47] Set ATHENA_PROC_NUMBER=12
[2026-02-02 09:52:47] Set ATHENA_CORE_NUMBER=12
[2026-02-02 09:52:47] Starting ATLAS job with PandaID=6996649219
[2026-02-02 09:52:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 11:04:37]  *** The last 200 lines of the pilot log: ***
[2026-02-02 11:04:37]  filetype=log
[2026-02-02 11:04:37]  guid=2a46eac5-9506-4cb5-b382-76e0a7a08994
[2026-02-02 11:04:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 11:04:37]  is_altstaged=None
[2026-02-02 11:04:37]  is_tar=False
[2026-02-02 11:04:37]  lfn=log.48317892._009376.job.log.tgz.1
[2026-02-02 11:04:37]  mtime=0
[2026-02-02 11:04:37]  protocol_id=None
[2026-02-02 11:04:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 11:04:37]  replicas=None
[2026-02-02 11:04:37]  scope=mc23_13p6TeV
[2026-02-02 11:04:37]  status=None
[2026-02-02 11:04:37]  status_code=0
[2026-02-02 11:04:37]  storage_token=
[2026-02-02 11:04:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6996649219/log.48317892._009376.job.log.tgz.1
[2026-02-02 11:04:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/d6/log.48317892._009376.job.log.tgz.1
[2026-02-02 11:04:37]  workdir=None
[2026-02-02 11:04:37] ]
[2026-02-02 11:04:37] 2026-02-02 16:04:02,090 | INFO     | transferring file log.48317892._009376.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6996649219/log.48317892._009376.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-02 11:04:37] 2026-02-02 16:04:02,090 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6996649219/log.48317892._009376.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317892._009376.job
[2026-02-02 11:04:37] 2026-02-02 16:04:02,113 | INFO     | adding to output.list: log.48317892._009376.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/d6/log.48317892._009376.job.log.tg
[2026-02-02 11:04:37] 2026-02-02 16:04:02,113 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 11:04:37] 2026-02-02 16:04:02,114 | INFO     | summary of transferred files:
[2026-02-02 11:04:37] 2026-02-02 16:04:02,114 | INFO     |  -- lfn=log.48317892._009376.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 11:04:37] 2026-02-02 16:04:02,114 | INFO     | stage-out finished correctly
[2026-02-02 11:04:37] 2026-02-02 16:04:02,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 11:04:37] 2026-02-02 16:04:02,910 | INFO     | monitor loop #324: job 0:6996649219 is in state 'finished'
[2026-02-02 11:04:37] 2026-02-02 16:04:02,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 11:04:37] 2026-02-02 16:04:03,828 | INFO     | time since job start (4257s) is within the limit (349056.0s)
[2026-02-02 11:04:37] 2026-02-02 16:04:03,828 | INFO     | 4264s have passed since pilot start - server update state is 'RUNNING'
[2026-02-02 11:04:37] 2026-02-02 16:04:04,411 | INFO     | job 6996649219 has state=finished
[2026-02-02 11:04:37] 2026-02-02 16:04:04,412 | INFO     | preparing for final server update for job 6996649219 in state='finished'
[2026-02-02 11:04:37] 2026-02-02 16:04:04,412 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6996649219/jobReport.json
[2026-02-02 11:04:37] 2026-02-02 16:04:04,415 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-02 11:04:37] 2026-02-02 16:04:04,415 | INFO     | this job has now completed (state=finished)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,415 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,416 | INFO     | log transfer has been attempted: DONE
[2026-02-02 11:04:37] 2026-02-02 16:04:04,416 | INFO     | job 6996649219 has finished - writing final server update
[2026-02-02 11:04:37] 2026-02-02 16:04:04,416 | INFO     | total number of processed events: 400 (read)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,418 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996649219/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,419 | INFO     | extracted standard info from prmon json
[2026-02-02 11:04:37] 2026-02-02 16:04:04,419 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 11:04:37] 2026-02-02 16:04:04,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 11:04:37] 2026-02-02 16:04:04,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 11:04:37] 2026-02-02 16:04:04,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 11:04:37] 2026-02-02 16:04:04,421 | INFO     | fitting pss+swap vs Time
[2026-02-02 11:04:37] 2026-02-02 16:04:04,421 | INFO     | sum of square deviations: 77515872.0
[2026-02-02 11:04:37] 2026-02-02 16:04:04,421 | INFO     | sum of deviations: -3761497656.0
[2026-02-02 11:04:37] 2026-02-02 16:04:04,421 | INFO     | mean x: 1770046206.0
[2026-02-02 11:04:37] 2026-02-02 16:04:04,421 | INFO     | mean y: 2748198.301587302
[2026-02-02 11:04:37] 2026-02-02 16:04:04,421 | INFO     | intersect: 85895152980.64981
[2026-02-02 11:04:37] 2026-02-02 16:04:04,422 | INFO     | chi2: 0.05182965746013639
[2026-02-02 11:04:37] 2026-02-02 16:04:04,422 | INFO     | current memory leak: -48.53 B/s (using 63 data points, chi2=0.05)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,422 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,422 | INFO     | ..............................
[2026-02-02 11:04:37] 2026-02-02 16:04:04,422 | INFO     | . Timing measurements:
[2026-02-02 11:04:37] 2026-02-02 16:04:04,422 | INFO     | . get job = 0 s
[2026-02-02 11:04:37] 2026-02-02 16:04:04,422 | INFO     | . initial setup = 7 s
[2026-02-02 11:04:37] 2026-02-02 16:04:04,423 | INFO     | . payload setup = 6 s
[2026-02-02 11:04:37] 2026-02-02 16:04:04,423 | INFO     | . stage-in = 0 s
[2026-02-02 11:04:37] 2026-02-02 16:04:04,423 | INFO     | . payload execution = 4232 s
[2026-02-02 11:04:37] 2026-02-02 16:04:04,423 | INFO     | . stage-out = 0 s
[2026-02-02 11:04:37] 2026-02-02 16:04:04,423 | INFO     | . log creation = 0 s
[2026-02-02 11:04:37] 2026-02-02 16:04:04,423 | INFO     | ..............................
[2026-02-02 11:04:37] 2026-02-02 16:04:04,754 | INFO     | 
[2026-02-02 11:04:37] 2026-02-02 16:04:04,755 | INFO     | job summary report
[2026-02-02 11:04:37] 2026-02-02 16:04:04,755 | INFO     | --------------------------------------------------
[2026-02-02 11:04:37] 2026-02-02 16:04:04,755 | INFO     | PanDA job id: 6996649219
[2026-02-02 11:04:37] 2026-02-02 16:04:04,755 | INFO     | task id: 48317892
[2026-02-02 11:04:37] 2026-02-02 16:04:04,755 | INFO     | errors: (none)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,755 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 11:04:37] 2026-02-02 16:04:04,756 | INFO     | pilot state: finished 
[2026-02-02 11:04:37] 2026-02-02 16:04:04,756 | INFO     | transexitcode: 0
[2026-02-02 11:04:37] 2026-02-02 16:04:04,756 | INFO     | exeerrorcode: 0
[2026-02-02 11:04:37] 2026-02-02 16:04:04,756 | INFO     | exeerrordiag: 
[2026-02-02 11:04:37] 2026-02-02 16:04:04,756 | INFO     | exitcode: 0
[2026-02-02 11:04:37] 2026-02-02 16:04:04,756 | INFO     | exitmsg: OK
[2026-02-02 11:04:37] 2026-02-02 16:04:04,757 | INFO     | cpuconsumptiontime: 45825 s
[2026-02-02 11:04:37] 2026-02-02 16:04:04,757 | INFO     | nevents: 400
[2026-02-02 11:04:37] 2026-02-02 16:04:04,757 | INFO     | neventsw: 0
[2026-02-02 11:04:37] 2026-02-02 16:04:04,757 | INFO     | pid: 15952
[2026-02-02 11:04:37] 2026-02-02 16:04:04,757 | INFO     | pgrp: 15952
[2026-02-02 11:04:37] 2026-02-02 16:04:04,757 | INFO     | corecount: 12
[2026-02-02 11:04:37] 2026-02-02 16:04:04,757 | INFO     | event service: False
[2026-02-02 11:04:37] 2026-02-02 16:04:04,758 | INFO     | sizes: {0: 2277786, 1: 2278247, 11: 2278247, 4243: 2304168, 4245: 2313222, 4247: 2313360}
[2026-02-02 11:04:37] 2026-02-02 16:04:04,758 | INFO     | --------------------------------------------------
[2026-02-02 11:04:37] 2026-02-02 16:04:04,758 | INFO     | 
[2026-02-02 11:04:37] 2026-02-02 16:04:04,758 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 11:04:37] 2026-02-02 16:04:04,782 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,782 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,782 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,782 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,783 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,783 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,783 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,783 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,783 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,785 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,785 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,785 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 11:04:37] 2026-02-02 16:04:04,785 | INFO     | job 6996649219 has completed (purged errors)
[2026-02-02 11:04:37] 2026-02-02 16:04:04,786 | INFO     | overall cleanup function is called
[2026-02-02 11:04:37] 2026-02-02 16:04:04,943 | INFO     | PID=11528 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 11:04:37] 2026-02-02 16:04:05,794 | INFO     | --- collectZombieJob: --- 10, [15952]
[2026-02-02 11:04:37] 2026-02-02 16:04:05,794 | INFO     | zombie collector waiting for pid 15952
[2026-02-02 11:04:37] 2026-02-02 16:04:05,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 11:04:37] 2026-02-02 16:04:05,794 | INFO     | collected zombie processes
[2026-02-02 11:04:37] 2026-02-02 16:04:05,794 | INFO     | will attempt to kill all subprocesses of pid=15952
[2026-02-02 11:04:37] 2026-02-02 16:04:05,877 | INFO     | process IDs to be killed: [15952] (in reverse order)
[2026-02-02 11:04:37] 2026-02-02 16:04:05,936 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 11:04:37] 2026-02-02 16:04:05,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 11:04:37] 2026-02-02 16:04:05,940 | INFO     | did not find any defunct processes belonging to 15952
[2026-02-02 11:04:37] 2026-02-02 16:04:05,942 | INFO     | did not find any defunct processes belonging to 15952
[2026-02-02 11:04:37] 2026-02-02 16:04:05,943 | INFO     | ready for new job
[2026-02-02 11:04:37] 2026-02-02 16:04:05,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 11:04:37] 2026-02-02 16:04:05,944 | INFO     | **************************************
[2026-02-02 11:04:37] 2026-02-02 16:04:05,944 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 11:04:37] 2026-02-02 16:04:05,944 | INFO     | **************************************
[2026-02-02 11:04:37] 2026-02-02 16:04:05,944 | INFO     | 
[2026-02-02 11:04:37] 2026-02-02 16:04:05,945 | INFO     | architecture information:
[2026-02-02 11:04:37] 2026-02-02 16:04:05,946 | INFO     | executing command: cat /etc/os-release
[2026-02-02 11:04:37] 2026-02-02 16:04:05,961 | INFO     | cat /etc/os-release:
[2026-02-02 11:04:37] NAME="CentOS Linux"
[2026-02-02 11:04:37] VERSION="7 (Core)"
[2026-02-02 11:04:37] ID="centos"
[2026-02-02 11:04:37] ID_LIKE="rhel fedora"
[2026-02-02 11:04:37] VERSION_ID="7"
[2026-02-02 11:04:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 11:04:37] ANSI_COLOR="0;31"
[2026-02-02 11:04:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 11:04:37] HOME_URL="https://www.centos.org/"
[2026-02-02 11:04:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 11:04:37] 
[2026-02-02 11:04:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 11:04:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 11:04:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 11:04:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 11:04:37] 
[2026-02-02 11:04:37] 2026-02-02 16:04:05,961 | INFO     | **************************************
[2026-02-02 11:04:37] 2026-02-02 16:04:06,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 11:04:37] 2026-02-02 16:04:06,481 | INFO     | sufficient remaining disk space (18021875712 B)
[2026-02-02 11:04:37] 2026-02-02 16:04:06,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 11:04:37] 2026-02-02 16:04:06,482 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 11:04:37] 2026-02-02 16:04:06,482 | INFO     | update_server=False
[2026-02-02 11:04:37] 2026-02-02 16:04:06,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 11:04:37] 2026-02-02 16:04:06,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 11:04:37] 2026-02-02 16:04:06,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 11:04:37] 2026-02-02 16:04:06,483 | INFO     | aborting loop
[2026-02-02 11:04:37] 2026-02-02 16:04:07,043 | INFO     | all job control threads have been joined
[2026-02-02 11:04:37] 2026-02-02 16:04:07,488 | INFO     | [job] retrieve thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:07,488 | INFO     | [job] queue monitor thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:07,489 | INFO     | [job] job monitor thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:07,503 | INFO     | [job] validate thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:07,512 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:07,543 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:07,582 | INFO     | all data control threads have been joined
[2026-02-02 11:04:37] 2026-02-02 16:04:07,697 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 11:04:37] 2026-02-02 16:04:07,799 | INFO     | all payload control threads have been joined
[2026-02-02 11:04:37] 2026-02-02 16:04:07,969 | INFO     | [data] copytool_in thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:08,018 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:08,049 | INFO     | [job] control thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:08,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 11:04:37] 2026-02-02 16:04:08,494 | INFO     | [payload] validate_post thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:08,587 | INFO     | [data] control thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:08,603 | INFO     | [payload] failed_post thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:08,804 | INFO     | [payload] control thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:09,702 | INFO     | [data] copytool_out thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:12,273 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:12,823 | INFO     | [monitor] cgroup control has ended
[2026-02-02 11:04:37] 2026-02-02 16:04:16,706 | INFO     | job.realtimelogging is not enabled
[2026-02-02 11:04:37] 2026-02-02 16:04:17,709 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 11:04:37] 2026-02-02 16:04:19,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139717588830016)>', '<ExcThread(monitor, started 139716426987264)>']
[2026-02-02 11:04:37] 2026-02-02 16:04:24,641 | INFO     | all workflow threads have been joined
[2026-02-02 11:04:37] 2026-02-02 16:04:24,641 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 11:04:37] 2026-02-02 16:04:24,647 | INFO     | traces error code: 0
[2026-02-02 11:04:37] 2026-02-02 16:04:24,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 11:04:37] 2026-02-02 16:04:37,122 | INFO     | PID=11528 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 11:04:37] 2026-02-02 16:04:37,123 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 11:04:37] 2026-02-02 16:04:37,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 11:04:37] 2026-02-02 16:04:37,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 11:04:37] 2026-02-02 16:04:37,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 11:04:37] 2026-02-02 16:04:37,123 | INFO     | [monitor] control thread has ended
[2026-02-02 11:04:37] 2026-02-02 16:04:37,218 [wrapper] ==== pilot stdout END ====
[2026-02-02 11:04:37] 2026-02-02 16:04:37,221 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 11:04:37] 2026-02-02 16:04:37,225 [wrapper] pilotpid: 11528
[2026-02-02 11:04:37] 2026-02-02 16:04:37,228 [wrapper] Pilot exit status: 0
[2026-02-02 11:04:37] 2026-02-02 16:04:37,244 [wrapper] pandaids: 6996649219
[2026-02-02 11:04:37] 2026-02-02 16:04:37,283 [wrapper] cleanup supervisor_pilot 12462 11529
[2026-02-02 11:04:37] 2026-02-02 16:04:37,287 [wrapper] Test setup, not cleaning
[2026-02-02 11:04:37] 2026-02-02 16:04:37,291 [wrapper] apfmon messages muted
[2026-02-02 11:04:37] 2026-02-02 16:04:37,294 [wrapper] ==== wrapper stdout END ====
[2026-02-02 11:04:37] 2026-02-02 16:04:37,298 [wrapper] ==== wrapper stderr END ====
[2026-02-02 11:04:37]  *** Error codes and diagnostics ***
[2026-02-02 11:04:37]     "exeErrorCode": 0,
[2026-02-02 11:04:37]     "exeErrorDiag": "",
[2026-02-02 11:04:37]     "pilotErrorCode": 0,
[2026-02-02 11:04:37]     "pilotErrorDiag": "",
[2026-02-02 11:04:37]  *** Listing of results directory ***
[2026-02-02 11:04:37] total 671320
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas    584422 Feb  2 02:08 pilot3.tar.gz
[2026-02-02 11:04:37] -rwx------ 1 boincer umatlas     36322 Feb  2 02:11 runpilot2-wrapper.sh
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas      5111 Feb  2 02:14 queuedata.json
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas       100 Feb  2 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 11:04:37] -rwxr-xr-x 1 boincer umatlas      7986 Feb  2 09:52 run_atlas
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas       105 Feb  2 09:52 job.xml
[2026-02-02 11:04:37] -rw-r--r-- 2 boincer umatlas 493875788 Feb  2 09:52 EVNT.48317889._000180.pool.root.1
[2026-02-02 11:04:37] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 09:52 start_atlas.sh
[2026-02-02 11:04:37] drwxrwx--x 2 boincer umatlas      4096 Feb  2 09:52 shared
[2026-02-02 11:04:37] -rw-r--r-- 2 boincer umatlas    597757 Feb  2 09:52 input.tar.gz
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas         0 Feb  2 09:52 boinc_lockfile
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas      2520 Feb  2 09:52 pandaJob.out
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas        57 Feb  2 09:52 setup.sh.local
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas   1009833 Feb  2 09:52 agis_schedconf.cvmfs.json
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas   1511668 Feb  2 09:53 agis_ddmendpoints.agis.ALL.json
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas       445 Feb  2 09:53 workernode_map.json
[2026-02-02 11:04:37] drwx------ 5 boincer umatlas      4096 Feb  2 09:53 pilot3
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas      5954 Feb  2 11:02 init_data.xml
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas 187623959 Feb  2 11:03 HITS.48317892._009376.pool.root.1
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas       530 Feb  2 11:03 boinc_task_state.xml
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas        95 Feb  2 11:03 pilot_heartbeat.json
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas      1045 Feb  2 11:03 memory_monitor_summary.json
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas    372678 Feb  2 11:04 log.48317892._009376.job.log.tgz.1
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas      6415 Feb  2 11:04 heartbeat.json
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas      8192 Feb  2 11:04 boinc_mmap_file
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas        27 Feb  2 11:04 wrapper_checkpoint.txt
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas       745 Feb  2 11:04 pilotlog.txt
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas    623000 Feb  2 11:04 log.48317892._009376.job.log.1
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas       357 Feb  2 11:04 output.list
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas       620 Feb  2 11:04 runtime_log
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas   1013760 Feb  2 11:04 result.tar.gz
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas       659 Feb  2 11:04 STbNDmGH368n9Rq4apOajLDm4fhM0noT9bVooX4SDma3RKDmqEty2n.diag
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas      9343 Feb  2 11:04 runtime_log.err
[2026-02-02 11:04:37] -rw-r--r-- 1 boincer umatlas     21368 Feb  2 11:04 stderr.txt
[2026-02-02 11:04:37] HITS file was successfully produced:
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas 187623959 Feb  2 11:03 shared/HITS.pool.root.1
[2026-02-02 11:04:37]  *** Contents of shared directory: ***
[2026-02-02 11:04:37] total 667128
[2026-02-02 11:04:37] -rw-r--r-- 2 boincer umatlas 493875788 Feb  2 09:52 ATLAS.root_0
[2026-02-02 11:04:37] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 09:52 start_atlas.sh
[2026-02-02 11:04:37] -rw-r--r-- 2 boincer umatlas    597757 Feb  2 09:52 input.tar.gz
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas 187623959 Feb  2 11:03 HITS.pool.root.1
[2026-02-02 11:04:37] -rw------- 1 boincer umatlas   1013760 Feb  2 11:04 result.tar.gz
11:04:38 (7402): run_atlas exited; CPU time 45800.626585
11:04:38 (7402): called boinc_finish(0)

</stderr_txt>
]]>

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