Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:25:28 (1215729): wrapper (7.7.26015): starting
09:25:28 (1215729): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 09:25:28] Arguments: --nthreads 8
[2026-02-02 09:25:28] Threads: 8
[2026-02-02 09:25:28] Checking for CVMFS
[2026-02-02 09:25:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 09:25:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 09:25:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 09:25:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 09:25:30] 2.13.3.0 7100 128024 240652 155789 1 633 32388539 40960001 28039 16776704 0 1446382104 99.720 1027237929 48854 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-02 09:25:30] CVMFS is ok
[2026-02-02 09:25:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 09:25:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 09:25:30] Further information can be found at the LHC@home message board.
[2026-02-02 09:25:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 09:25:30] Checking for apptainer binary...
[2026-02-02 09:25:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 09:25:30] Running /usr/bin/apptainer --version
[2026-02-02 09:25:30] apptainer version 1.4.5-2.el9
[2026-02-02 09:25:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 09:25:30] c8-6-10.aglt2.org
[2026-02-02 09:25:30] apptainer works
[2026-02-02 09:25:31] Set ATHENA_PROC_NUMBER=8
[2026-02-02 09:25:31] Set ATHENA_CORE_NUMBER=8
[2026-02-02 09:25:31] Starting ATLAS job with PandaID=6983450119
[2026-02-02 09:25:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 11:26:44]  *** The last 200 lines of the pilot log: ***
[2026-02-02 11:26:44] 2026-02-02 16:25:35,847 | INFO     | intersect: -48544018744.82871
[2026-02-02 11:26:44] 2026-02-02 16:25:35,847 | INFO     | chi2: 2.407684475429781
[2026-02-02 11:26:44] 2026-02-02 16:25:35,847 | INFO     | sum of square deviations: 412683213.2727272
[2026-02-02 11:26:44] 2026-02-02 16:25:35,848 | INFO     | sum of deviations: 12356083551.09091
[2026-02-02 11:26:44] 2026-02-02 16:25:35,848 | INFO     | mean x: 1770045856.5454545
[2026-02-02 11:26:44] 2026-02-02 16:25:35,848 | INFO     | mean y: 2487118.381818182
[2026-02-02 11:26:44] 2026-02-02 16:25:35,848 | INFO     | intersect: -52994179063.63775
[2026-02-02 11:26:44] 2026-02-02 16:25:35,848 | INFO     | chi2: 2.41344444146344
[2026-02-02 11:26:44] 2026-02-02 16:25:35,848 | INFO     | current chi2=2.41344444146344 (change=-0.23923259432201807 %)
[2026-02-02 11:26:44] 2026-02-02 16:25:35,848 | INFO     | right removable region: 109
[2026-02-02 11:26:44] 2026-02-02 16:25:35,848 | INFO     | sum of square deviations: 412680163.2727272
[2026-02-02 11:26:44] 2026-02-02 16:25:35,849 | INFO     | sum of deviations: -12029157195.36364
[2026-02-02 11:26:44] 2026-02-02 16:25:35,849 | INFO     | mean x: 1770046161.5454545
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | mean y: 2552467.9727272727
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | intersect: 51597384047.529366
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | chi2: 0.1147081913266618
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | current chi2=0.1147081913266618 (change=95.23574652338172 %)
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | sum of square deviations: 358919490.7619043
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | sum of deviations: -13397943422.238096
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | mean x: 1770046314.047619
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | mean y: 2556261.8476190474
[2026-02-02 11:26:44] 2026-02-02 16:25:35,853 | INFO     | intersect: 66075814975.1306
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | chi2: 0.08322856590326551
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | current chi2=0.08322856590326551 (change=27.44322359137349 %)
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | sum of square deviations: 310042630.7500002
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | sum of deviations: -9850927876.450008
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | mean x: 1770046466.55
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | mean y: 2545058.19
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | intersect: 56241908134.71177
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | chi2: 0.06225828000326618
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | current chi2=0.06225828000326618 (change=25.196019746840975 %)
[2026-02-02 11:26:44] 2026-02-02 16:25:35,854 | INFO     | sum of square deviations: 265817020.73684216
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | sum of deviations: -5725959254.263157
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | mean x: 1770046619.0526316
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | mean y: 2530907.052631579
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | intersect: 38131070572.22123
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | chi2: 0.030793614427140775
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | current chi2=0.030793614427140775 (change=50.53892522323892 %)
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | sum of square deviations: 226010098.22222188
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | sum of deviations: -3804993961.111111
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | mean x: 1770046771.5555556
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | mean y: 2523540.5222222223
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | intersect: 29802153422.683407
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | chi2: 0.02584212234612275
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | current chi2=0.02584212234612275 (change=16.07960667538233 %)
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | left removable region: 50
[2026-02-02 11:26:44] 2026-02-02 16:25:35,855 | INFO     | sum of square deviations: 63657162.847457595
[2026-02-02 11:26:44] 2026-02-02 16:25:35,856 | INFO     | sum of deviations: 110004437.59322034
[2026-02-02 11:26:44] 2026-02-02 16:25:35,856 | INFO     | mean x: 1770047351.0508475
[2026-02-02 11:26:44] 2026-02-02 16:25:35,856 | INFO     | mean y: 2503450.13559322
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | intersect: -3056273514.717696
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | chi2: 4.7330175492489114e-05
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | current memory leak: 1.73 B/s (using 59 data points, chi2=0.00)
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | ..............................
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | . Timing measurements:
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | . get job = 0 s
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | . initial setup = 38 s
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | . payload setup = 45 s
[2026-02-02 11:26:44] 2026-02-02 16:25:35,860 | INFO     | . stage-in = 0 s
[2026-02-02 11:26:44] 2026-02-02 16:25:35,861 | INFO     | . payload execution = 7020 s
[2026-02-02 11:26:44] 2026-02-02 16:25:35,861 | INFO     | . stage-out = 2 s
[2026-02-02 11:26:44] 2026-02-02 16:25:35,861 | INFO     | . log creation = 0 s
[2026-02-02 11:26:44] 2026-02-02 16:25:35,861 | INFO     | ..............................
[2026-02-02 11:26:44] 2026-02-02 16:25:36,336 | INFO     | 
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | job summary report
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | --------------------------------------------------
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | PanDA job id: 6983450119
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | task id: 48298567
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | errors: (none)
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | pilot state: finished 
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | transexitcode: 0
[2026-02-02 11:26:44] 2026-02-02 16:25:36,337 | INFO     | exeerrorcode: 0
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | exeerrordiag: 
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | exitcode: 0
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | exitmsg: OK
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | cpuconsumptiontime: 27612 s
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | nevents: 400
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | neventsw: 0
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | pid: 1238016
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | pgrp: 1238016
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | corecount: 8
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | event service: False
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | sizes: {0: 2277306, 1: 2277991, 2: 2278452, 12: 2278452, 7070: 2305794, 7071: 2305793, 7074: 2315003, 7077: 2315059, 7079: 2315253}
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | --------------------------------------------------
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | 
[2026-02-02 11:26:44] 2026-02-02 16:25:36,338 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-02 11:26:44] 2026-02-02 16:25:36,454 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 11:26:44] 2026-02-02 16:25:36,455 | INFO     | job 6983450119 has completed (purged errors)
[2026-02-02 11:26:44] 2026-02-02 16:25:36,456 | INFO     | overall cleanup function is called
[2026-02-02 11:26:44] 2026-02-02 16:25:37,470 | INFO     | --- collectZombieJob: --- 10, [1238016]
[2026-02-02 11:26:44] 2026-02-02 16:25:37,472 | INFO     | zombie collector waiting for pid 1238016
[2026-02-02 11:26:44] 2026-02-02 16:25:37,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 11:26:44] 2026-02-02 16:25:37,472 | INFO     | collected zombie processes
[2026-02-02 11:26:44] 2026-02-02 16:25:37,472 | INFO     | will attempt to kill all subprocesses of pid=1238016
[2026-02-02 11:26:44] 2026-02-02 16:25:38,642 | INFO     | process IDs to be killed: [1238016] (in reverse order)
[2026-02-02 11:26:44] 2026-02-02 16:25:38,900 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 11:26:44] 2026-02-02 16:25:38,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 11:26:44] 2026-02-02 16:25:38,986 | INFO     | did not find any defunct processes belonging to 1238016
[2026-02-02 11:26:44] 2026-02-02 16:25:39,038 | INFO     | did not find any defunct processes belonging to 1238016
[2026-02-02 11:26:44] 2026-02-02 16:25:39,039 | INFO     | ready for new job
[2026-02-02 11:26:44] 2026-02-02 16:25:39,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 11:26:44] 2026-02-02 16:25:39,040 | INFO     | **************************************
[2026-02-02 11:26:44] 2026-02-02 16:25:39,040 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 11:26:44] 2026-02-02 16:25:39,040 | INFO     | **************************************
[2026-02-02 11:26:44] 2026-02-02 16:25:39,040 | INFO     | 
[2026-02-02 11:26:44] 2026-02-02 16:25:39,049 | INFO     | architecture information:
[2026-02-02 11:26:44] 2026-02-02 16:25:39,054 | INFO     | executing command: cat /etc/os-release
[2026-02-02 11:26:44] 2026-02-02 16:25:39,141 | INFO     | cat /etc/os-release:
[2026-02-02 11:26:44] NAME="CentOS Linux"
[2026-02-02 11:26:44] VERSION="7 (Core)"
[2026-02-02 11:26:44] ID="centos"
[2026-02-02 11:26:44] ID_LIKE="rhel fedora"
[2026-02-02 11:26:44] VERSION_ID="7"
[2026-02-02 11:26:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 11:26:44] ANSI_COLOR="0;31"
[2026-02-02 11:26:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 11:26:44] HOME_URL="https://www.centos.org/"
[2026-02-02 11:26:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 11:26:44] 
[2026-02-02 11:26:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 11:26:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 11:26:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 11:26:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 11:26:44] 
[2026-02-02 11:26:44] 2026-02-02 16:25:39,142 | INFO     | **************************************
[2026-02-02 11:26:44] 2026-02-02 16:25:39,646 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-02 11:26:44] 2026-02-02 16:25:39,727 | INFO     | sufficient remaining disk space (165187420160 B)
[2026-02-02 11:26:44] 2026-02-02 16:25:39,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 11:26:44] 2026-02-02 16:25:39,736 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 11:26:44] 2026-02-02 16:25:39,736 | INFO     | update_server=False
[2026-02-02 11:26:44] 2026-02-02 16:25:39,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 11:26:44] 2026-02-02 16:25:39,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 11:26:44] 2026-02-02 16:25:39,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 11:26:44] 2026-02-02 16:25:39,737 | INFO     | aborting loop
[2026-02-02 11:26:44] 2026-02-02 16:25:39,762 | INFO     | all job control threads have been joined
[2026-02-02 11:26:44] 2026-02-02 16:25:40,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 11:26:44] 2026-02-02 16:25:40,743 | INFO     | [job] retrieve thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:40,743 | INFO     | [job] job monitor thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:40,769 | INFO     | [job] control thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:40,795 | INFO     | all payload control threads have been joined
[2026-02-02 11:26:44] 2026-02-02 16:25:40,855 | INFO     | all data control threads have been joined
[2026-02-02 11:26:44] 2026-02-02 16:25:40,888 | INFO     | [data] copytool_in thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 11:26:44] 2026-02-02 16:25:41,121 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,382 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,386 | INFO     | [job] validate thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,606 | INFO     | [payload] failed_post thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,655 | INFO     | [payload] validate_post thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,746 | INFO     | [data] copytool_out thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,800 | INFO     | [payload] control thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,860 | INFO     | [data] control thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:41,900 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:42,036 | INFO     | [job] queue monitor thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:42,184 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:25:44,406 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 11:26:44] 2026-02-02 16:26:11,257 | INFO     | PID=1226430 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 11:26:44] 2026-02-02 16:26:11,298 | INFO     | .. there are 31 such processes running
[2026-02-02 11:26:44] 2026-02-02 16:26:11,299 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 11:26:44] 2026-02-02 16:26:11,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 11:26:44] 2026-02-02 16:26:11,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 11:26:44] 2026-02-02 16:26:36,417 | INFO     | [monitor] cgroup control has ended
[2026-02-02 11:26:44] 2026-02-02 16:26:36,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963690407744)>', '<ExcThread(monitor, started 139962959775488)>']
[2026-02-02 11:26:44] 2026-02-02 16:26:36,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 11:26:44] 2026-02-02 16:26:36,477 | INFO     | [monitor] control thread has ended
[2026-02-02 11:26:44] 2026-02-02 16:26:41,467 | INFO     | all workflow threads have been joined
[2026-02-02 11:26:44] 2026-02-02 16:26:41,467 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 11:26:44] 2026-02-02 16:26:41,467 | INFO     | traces error code: 0
[2026-02-02 11:26:44] 2026-02-02 16:26:41,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 11:26:44] 2026-02-02 16:26:42,112 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-02-02 11:26:44] 2026-02-02 16:26:42,448 [wrapper] ==== pilot stdout END ====
[2026-02-02 11:26:44] 2026-02-02 16:26:42,462 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 11:26:44] 2026-02-02 16:26:42,484 [wrapper] pilotpid: 1226430
[2026-02-02 11:26:44] 2026-02-02 16:26:42,508 [wrapper] Pilot exit status: 0
[2026-02-02 11:26:44] 2026-02-02 16:26:42,653 [wrapper] pandaids: 6983450119
[2026-02-02 11:26:44] 2026-02-02 16:26:43,046 [wrapper] cleanup supervisor_pilot 1907807 1226431
[2026-02-02 11:26:44] 2026-02-02 16:26:43,081 [wrapper] Test setup, not cleaning
[2026-02-02 11:26:44] 2026-02-02 16:26:43,124 [wrapper] apfmon messages muted
[2026-02-02 11:26:44] 2026-02-02 16:26:43,174 [wrapper] ==== wrapper stdout END ====
[2026-02-02 11:26:44] 2026-02-02 16:26:43,219 [wrapper] ==== wrapper stderr END ====
[2026-02-02 11:26:44]  *** Error codes and diagnostics ***
[2026-02-02 11:26:44]     "exeErrorCode": 0,
[2026-02-02 11:26:44]     "exeErrorDiag": "",
[2026-02-02 11:26:44]     "pilotErrorCode": 0,
[2026-02-02 11:26:44]     "pilotErrorDiag": "",
[2026-02-02 11:26:44]  *** Listing of results directory ***
[2026-02-02 11:26:44] total 413216
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-02-02 11:26:44] -rwx------. 1 boincer umatlas     36322 Jan 25 15:51 runpilot2-wrapper.sh
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 15:54 queuedata.json
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas       100 Feb  2 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 11:26:44] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 09:25 run_atlas
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas       105 Feb  2 09:25 job.xml
[2026-02-02 11:26:44] -rw-r--r--. 2 boincer umatlas 249018966 Feb  2 09:25 EVNT.48298565._000019.pool.root.1
[2026-02-02 11:26:44] -rw-r--r--. 2 boincer umatlas    597770 Feb  2 09:25 input.tar.gz
[2026-02-02 11:26:44] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 09:25 start_atlas.sh
[2026-02-02 11:26:44] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 09:25 shared
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas         0 Feb  2 09:25 boinc_lockfile
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas      2614 Feb  2 09:25 pandaJob.out
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas        57 Feb  2 09:25 setup.sh.local
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas   1009833 Feb  2 09:26 agis_schedconf.cvmfs.json
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas   1511668 Feb  2 09:26 agis_ddmendpoints.agis.ALL.json
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas       430 Feb  2 09:27 workernode_map.json
[2026-02-02 11:26:44] drwx------. 5 boincer umatlas      4096 Feb  2 09:27 pilot3
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas      7171 Feb  2 11:20 init_data.xml
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas 167546472 Feb  2 11:24 HITS.48298567._000462.pool.root.1
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas       529 Feb  2 11:24 boinc_task_state.xml
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas      1045 Feb  2 11:25 memory_monitor_summary.json
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas    357072 Feb  2 11:25 log.48298567._000462.job.log.tgz.1
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas      6350 Feb  2 11:25 heartbeat.json
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas        95 Feb  2 11:26 pilot_heartbeat.json
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas      4821 Feb  2 11:26 pilotlog.txt
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas    952355 Feb  2 11:26 log.48298567._000462.job.log.1
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas        27 Feb  2 11:26 wrapper_checkpoint.txt
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas       357 Feb  2 11:26 output.list
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 11:26 boinc_mmap_file
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas       620 Feb  2 11:26 runtime_log
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas   1331200 Feb  2 11:26 result.tar.gz
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas      9336 Feb  2 11:26 runtime_log.err
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas       656 Feb  2 11:26 NsJMDmQGM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvo1KDmGTVnPn.diag
[2026-02-02 11:26:44] -rw-r--r--. 1 boincer umatlas     21019 Feb  2 11:26 stderr.txt
[2026-02-02 11:26:44] HITS file was successfully produced:
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas 167546472 Feb  2 11:24 shared/HITS.pool.root.1
[2026-02-02 11:26:44]  *** Contents of shared directory: ***
[2026-02-02 11:26:44] total 408712
[2026-02-02 11:26:44] -rw-r--r--. 2 boincer umatlas 249018966 Feb  2 09:25 ATLAS.root_0
[2026-02-02 11:26:44] -rw-r--r--. 2 boincer umatlas    597770 Feb  2 09:25 input.tar.gz
[2026-02-02 11:26:44] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 09:25 start_atlas.sh
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas 167546472 Feb  2 11:24 HITS.pool.root.1
[2026-02-02 11:26:44] -rw-------. 1 boincer umatlas   1331200 Feb  2 11:26 result.tar.gz
11:26:46 (1215729): run_atlas exited; CPU time 27844.085732
11:26:46 (1215729): called boinc_finish(0)

</stderr_txt>
]]>

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