Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:59:14 (47203): wrapper (7.7.26015): starting
08:59:14 (47203): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 08:59:14] Arguments: --nthreads 8
[2026-02-02 08:59:14] Threads: 8
[2026-02-02 08:59:14] Checking for CVMFS
[2026-02-02 08:59:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 08:59:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 08:59:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 08:59:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 08:59:14] 2.11.2.0 5808 268383 118716 155788 1 52 10216931 18432001 2749 130560 0 195710470 99.962 12891697 8455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-02-02 08:59:14] CVMFS is ok
[2026-02-02 08:59:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 08:59:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 08:59:14] Further information can be found at the LHC@home message board.
[2026-02-02 08:59:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 08:59:14] Checking for apptainer binary...
[2026-02-02 08:59:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 08:59:14] Running /usr/bin/apptainer --version
[2026-02-02 08:59:14] apptainer version 1.3.2-1.el7
[2026-02-02 08:59:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 08:59:15] c-9-34.aglt2.org
[2026-02-02 08:59:15] apptainer works
[2026-02-02 08:59:15] Set ATHENA_PROC_NUMBER=8
[2026-02-02 08:59:15] Set ATHENA_CORE_NUMBER=8
[2026-02-02 08:59:15] Starting ATLAS job with PandaID=6993186805
[2026-02-02 08:59:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:00:06 (47203): BOINC client no longer exists - exiting
11:00:06 (47203): timer handler: client dead, exiting
11:14:14 (45267): wrapper (7.7.26015): starting
11:14:14 (45267): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 11:14:14] Arguments: --nthreads 8
[2026-02-02 11:14:14] Threads: 8
[2026-02-02 11:14:14] This job has been restarted, cleaning up previous attempt
[2026-02-02 11:14:14] Checking for CVMFS
[2026-02-02 11:14:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 11:14:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 11:14:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 11:14:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 11:14:15] 2.11.2.0 5808 268518 117240 155792 2 32 10234556 18432000 1 130560 0 195868909 99.962 12895798 8457 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-02-02 11:14:15] CVMFS is ok
[2026-02-02 11:14:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 11:14:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 11:14:15] Further information can be found at the LHC@home message board.
[2026-02-02 11:14:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 11:14:15] Checking for apptainer binary...
[2026-02-02 11:14:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 11:14:15] Running /usr/bin/apptainer --version
[2026-02-02 11:14:15] apptainer version 1.3.2-1.el7
[2026-02-02 11:14:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 11:14:16] c-9-34.aglt2.org
[2026-02-02 11:14:16] apptainer works
[2026-02-02 11:14:16] Set ATHENA_PROC_NUMBER=8
[2026-02-02 11:14:16] Set ATHENA_CORE_NUMBER=8
[2026-02-02 11:14:16] Starting ATLAS job with PandaID=6993186805
[2026-02-02 11:14:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 14:07:48]  *** The last 200 lines of the pilot log: ***
[2026-02-02 14:07:48] 2026-02-02 19:07:16,820 | INFO     | intersect: -34016566839.719982
[2026-02-02 14:07:48] 2026-02-02 19:07:16,820 | INFO     | chi2: 1.2269937578531926
[2026-02-02 14:07:48] 2026-02-02 19:07:16,820 | INFO     | current chi2=1.2269937578531926 (change=0.0004702875002402792 %)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,820 | INFO     | right removable region: 164
[2026-02-02 14:07:48] 2026-02-02 19:07:16,820 | INFO     | sum of square deviations: 1392881930.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,821 | INFO     | sum of deviations: 4890347003.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,821 | INFO     | mean x: 1770054190.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,821 | INFO     | mean y: 2494956.521212121
[2026-02-02 14:07:48] 2026-02-02 19:07:16,821 | INFO     | intersect: -6212087210.693846
[2026-02-02 14:07:48] 2026-02-02 19:07:16,821 | INFO     | chi2: 0.04440685057157254
[2026-02-02 14:07:48] 2026-02-02 19:07:16,821 | INFO     | current chi2=0.04440685057157254 (change=96.3808583827353 %)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,822 | INFO     | sum of square deviations: 1270051720.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,822 | INFO     | sum of deviations: 292578844.49999964
[2026-02-02 14:07:48] 2026-02-02 19:07:16,822 | INFO     | mean x: 1770054342.5
[2026-02-02 14:07:48] 2026-02-02 19:07:16,823 | INFO     | mean y: 2500598.50625
[2026-02-02 14:07:48] 2026-02-02 19:07:16,823 | INFO     | intersect: -405262680.7961524
[2026-02-02 14:07:48] 2026-02-02 19:07:16,823 | INFO     | chi2: 0.0032697853079009086
[2026-02-02 14:07:48] 2026-02-02 19:07:16,823 | INFO     | current chi2=0.0032697853079009086 (change=92.63675476685552 %)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,823 | INFO     | sum of square deviations: 1154663510.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,824 | INFO     | sum of deviations: -600256835.9999996
[2026-02-02 14:07:48] 2026-02-02 19:07:16,824 | INFO     | mean x: 1770054495.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,824 | INFO     | mean y: 2501775.7032258064
[2026-02-02 14:07:48] 2026-02-02 19:07:16,824 | INFO     | intersect: 922672285.5656854
[2026-02-02 14:07:48] 2026-02-02 19:07:16,824 | INFO     | chi2: 0.0020982133915654175
[2026-02-02 14:07:48] 2026-02-02 19:07:16,824 | INFO     | current chi2=0.0020982133915654175 (change=35.830239786831775 %)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,825 | INFO     | sum of square deviations: 1046484737.5
[2026-02-02 14:07:48] 2026-02-02 19:07:16,825 | INFO     | sum of deviations: -1128810947.5
[2026-02-02 14:07:48] 2026-02-02 19:07:16,825 | INFO     | mean x: 1770054647.5
[2026-02-02 14:07:48] 2026-02-02 19:07:16,825 | INFO     | mean y: 2502520.1133333333
[2026-02-02 14:07:48] 2026-02-02 19:07:16,825 | INFO     | intersect: 1911806107.803023
[2026-02-02 14:07:48] 2026-02-02 19:07:16,826 | INFO     | chi2: 0.0015378869435702753
[2026-02-02 14:07:48] 2026-02-02 19:07:16,826 | INFO     | current chi2=0.0015378869435702753 (change=26.70493145490309 %)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,826 | INFO     | sum of square deviations: 945282840.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,827 | INFO     | sum of deviations: -1492638646.0000002
[2026-02-02 14:07:48] 2026-02-02 19:07:16,827 | INFO     | mean x: 1770054800.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,827 | INFO     | mean y: 2503066.379310345
[2026-02-02 14:07:48] 2026-02-02 19:07:16,827 | INFO     | intersect: 2797488956.5471687
[2026-02-02 14:07:48] 2026-02-02 19:07:16,827 | INFO     | chi2: 0.0011369963506195702
[2026-02-02 14:07:48] 2026-02-02 19:07:16,827 | INFO     | current chi2=0.0011369963506195702 (change=26.067624452290307 %)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,827 | INFO     | sum of square deviations: 850825255.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,828 | INFO     | sum of deviations: -1677018740.5000002
[2026-02-02 14:07:48] 2026-02-02 19:07:16,828 | INFO     | mean x: 1770054952.5
[2026-02-02 14:07:48] 2026-02-02 19:07:16,828 | INFO     | mean y: 2503364.0785714285
[2026-02-02 14:07:48] 2026-02-02 19:07:16,828 | INFO     | intersect: 3491369391.0482783
[2026-02-02 14:07:48] 2026-02-02 19:07:16,828 | INFO     | chi2: 0.0009283845944744799
[2026-02-02 14:07:48] 2026-02-02 19:07:16,828 | INFO     | current chi2=0.0009283845944744799 (change=18.347618796789796 %)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,829 | INFO     | left removable region: 60
[2026-02-02 14:07:48] 2026-02-02 19:07:16,829 | INFO     | sum of square deviations: 348769330.0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,829 | INFO     | sum of deviations: -993445237.5
[2026-02-02 14:07:48] 2026-02-02 19:07:16,829 | INFO     | mean x: 1770055684.5
[2026-02-02 14:07:48] 2026-02-02 19:07:16,829 | INFO     | mean y: 2501853.9326923075
[2026-02-02 14:07:48] 2026-02-02 19:07:16,829 | INFO     | intersect: 5044382657.718759
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | chi2: 0.0005896442738931549
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | current memory leak: -2.85 B/s (using 104 data points, chi2=0.00)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | ..............................
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | . Timing measurements:
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | . get job = 0 s
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | . initial setup = 0 s
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | . payload setup = 4 s
[2026-02-02 14:07:48] 2026-02-02 19:07:16,830 | INFO     | . stage-in = 0 s
[2026-02-02 14:07:48] 2026-02-02 19:07:16,831 | INFO     | . payload execution = 10349 s
[2026-02-02 14:07:48] 2026-02-02 19:07:16,831 | INFO     | . stage-out = 2 s
[2026-02-02 14:07:48] 2026-02-02 19:07:16,831 | INFO     | . log creation = 0 s
[2026-02-02 14:07:48] 2026-02-02 19:07:16,831 | INFO     | ..............................
[2026-02-02 14:07:48] 2026-02-02 19:07:16,909 | INFO     | 
[2026-02-02 14:07:48] 2026-02-02 19:07:16,909 | INFO     | job summary report
[2026-02-02 14:07:48] 2026-02-02 19:07:16,909 | INFO     | --------------------------------------------------
[2026-02-02 14:07:48] 2026-02-02 19:07:16,909 | INFO     | PanDA job id: 6993186805
[2026-02-02 14:07:48] 2026-02-02 19:07:16,909 | INFO     | task id: 48318034
[2026-02-02 14:07:48] 2026-02-02 19:07:16,909 | INFO     | errors: (none)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,910 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 14:07:48] 2026-02-02 19:07:16,910 | INFO     | pilot state: finished 
[2026-02-02 14:07:48] 2026-02-02 19:07:16,910 | INFO     | transexitcode: 0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,910 | INFO     | exeerrorcode: 0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,910 | INFO     | exeerrordiag: 
[2026-02-02 14:07:48] 2026-02-02 19:07:16,910 | INFO     | exitcode: 0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,911 | INFO     | exitmsg: OK
[2026-02-02 14:07:48] 2026-02-02 19:07:16,911 | INFO     | cpuconsumptiontime: 78026 s
[2026-02-02 14:07:48] 2026-02-02 19:07:16,911 | INFO     | nevents: 400
[2026-02-02 14:07:48] 2026-02-02 19:07:16,911 | INFO     | neventsw: 0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,911 | INFO     | pid: 21367
[2026-02-02 14:07:48] 2026-02-02 19:07:16,911 | INFO     | pgrp: 21367
[2026-02-02 14:07:48] 2026-02-02 19:07:16,911 | INFO     | corecount: 8
[2026-02-02 14:07:48] 2026-02-02 19:07:16,912 | INFO     | event service: False
[2026-02-02 14:07:48] 2026-02-02 19:07:16,912 | INFO     | sizes: {0: 2277748, 1: 2278265, 11: 2278265, 10357: 2306930, 10361: 2316012, 10362: 2316214}
[2026-02-02 14:07:48] 2026-02-02 19:07:16,912 | INFO     | --------------------------------------------------
[2026-02-02 14:07:48] 2026-02-02 19:07:16,912 | INFO     | 
[2026-02-02 14:07:48] 2026-02-02 19:07:16,912 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 14:07:48] 2026-02-02 19:07:16,930 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,931 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,931 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,931 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,932 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,932 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,932 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,933 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,934 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 14:07:48] 2026-02-02 19:07:16,934 | INFO     | job 6993186805 has completed (purged errors)
[2026-02-02 14:07:48] 2026-02-02 19:07:16,934 | INFO     | overall cleanup function is called
[2026-02-02 14:07:48] 2026-02-02 19:07:17,941 | INFO     | --- collectZombieJob: --- 10, [21367]
[2026-02-02 14:07:48] 2026-02-02 19:07:17,941 | INFO     | zombie collector waiting for pid 21367
[2026-02-02 14:07:48] 2026-02-02 19:07:17,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 14:07:48] 2026-02-02 19:07:17,942 | INFO     | collected zombie processes
[2026-02-02 14:07:48] 2026-02-02 19:07:17,942 | INFO     | will attempt to kill all subprocesses of pid=21367
[2026-02-02 14:07:48] 2026-02-02 19:07:18,192 | INFO     | process IDs to be killed: [21367] (in reverse order)
[2026-02-02 14:07:48] 2026-02-02 19:07:18,269 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 14:07:48] 2026-02-02 19:07:18,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 14:07:48] 2026-02-02 19:07:18,277 | INFO     | did not find any defunct processes belonging to 21367
[2026-02-02 14:07:48] 2026-02-02 19:07:18,285 | INFO     | did not find any defunct processes belonging to 21367
[2026-02-02 14:07:48] 2026-02-02 19:07:18,285 | INFO     | ready for new job
[2026-02-02 14:07:48] 2026-02-02 19:07:18,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 14:07:48] 2026-02-02 19:07:18,287 | INFO     | **************************************
[2026-02-02 14:07:48] 2026-02-02 19:07:18,288 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 14:07:48] 2026-02-02 19:07:18,288 | INFO     | **************************************
[2026-02-02 14:07:48] 2026-02-02 19:07:18,288 | INFO     | 
[2026-02-02 14:07:48] 2026-02-02 19:07:18,290 | INFO     | architecture information:
[2026-02-02 14:07:48] 2026-02-02 19:07:18,290 | INFO     | executing command: cat /etc/os-release
[2026-02-02 14:07:48] 2026-02-02 19:07:18,305 | INFO     | cat /etc/os-release:
[2026-02-02 14:07:48] NAME="CentOS Linux"
[2026-02-02 14:07:48] VERSION="7 (Core)"
[2026-02-02 14:07:48] ID="centos"
[2026-02-02 14:07:48] ID_LIKE="rhel fedora"
[2026-02-02 14:07:48] VERSION_ID="7"
[2026-02-02 14:07:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 14:07:48] ANSI_COLOR="0;31"
[2026-02-02 14:07:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 14:07:48] HOME_URL="https://www.centos.org/"
[2026-02-02 14:07:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 14:07:48] 
[2026-02-02 14:07:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 14:07:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 14:07:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 14:07:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 14:07:48] 
[2026-02-02 14:07:48] 2026-02-02 19:07:18,306 | INFO     | **************************************
[2026-02-02 14:07:48] 2026-02-02 19:07:18,808 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 14:07:48] 2026-02-02 19:07:18,834 | INFO     | sufficient remaining disk space (102085165056 B)
[2026-02-02 14:07:48] 2026-02-02 19:07:18,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 14:07:48] 2026-02-02 19:07:18,835 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 14:07:48] 2026-02-02 19:07:18,835 | INFO     | update_server=False
[2026-02-02 14:07:48] 2026-02-02 19:07:18,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 14:07:48] 2026-02-02 19:07:18,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 14:07:48] 2026-02-02 19:07:19,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 14:07:48] 2026-02-02 19:07:19,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 14:07:48] 2026-02-02 19:07:19,267 | INFO     | aborting loop
[2026-02-02 14:07:48] 2026-02-02 19:07:19,608 | INFO     | all payload control threads have been joined
[2026-02-02 14:07:48] 2026-02-02 19:07:19,695 | INFO     | all data control threads have been joined
[2026-02-02 14:07:48] 2026-02-02 19:07:19,840 | INFO     | [job] queue monitor thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:19,841 | INFO     | [job] retrieve thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:19,886 | INFO     | [payload] validate_post thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,094 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,095 | INFO     | [data] copytool_in thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,103 | INFO     | [payload] failed_post thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,218 | INFO     | all job control threads have been joined
[2026-02-02 14:07:48] 2026-02-02 19:07:20,272 | INFO     | [job] job monitor thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,287 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,378 | INFO     | [job] validate thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,614 | INFO     | [payload] control thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,700 | INFO     | [data] control thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,758 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:20,976 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:21,224 | INFO     | [job] control thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:21,232 | INFO     | [data] copytool_out thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:22,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 14:07:48] 2026-02-02 19:07:26,292 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 14:07:48] 2026-02-02 19:07:41,389 | INFO     | [monitor] cgroup control has ended
[2026-02-02 14:07:48] 2026-02-02 19:07:43,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140389784958784)>', '<ExcThread(monitor, started 140389352711936)>']
[2026-02-02 14:07:48] 2026-02-02 19:07:48,301 | INFO     | all workflow threads have been joined
[2026-02-02 14:07:48] 2026-02-02 19:07:48,301 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 14:07:48] 2026-02-02 19:07:48,302 | INFO     | traces error code: 0
[2026-02-02 14:07:48] 2026-02-02 19:07:48,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 14:07:48] 2026-02-02 19:07:48,653 | INFO     | PID=12077 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 14:07:48] 2026-02-02 19:07:48,653 | INFO     | .. there are 4 such processes running
[2026-02-02 14:07:48] 2026-02-02 19:07:48,653 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 14:07:48] 2026-02-02 19:07:48,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 14:07:48] 2026-02-02 19:07:48,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 14:07:48] 2026-02-02 19:07:48,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 14:07:48] 2026-02-02 19:07:48,654 | INFO     | [monitor] control thread has ended
[2026-02-02 14:07:48] 2026-02-02 19:07:48,733 [wrapper] ==== pilot stdout END ====
[2026-02-02 14:07:48] 2026-02-02 19:07:48,736 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 14:07:48] 2026-02-02 19:07:48,739 [wrapper] pilotpid: 12077
[2026-02-02 14:07:48] 2026-02-02 19:07:48,741 [wrapper] Pilot exit status: 0
[2026-02-02 14:07:48] 2026-02-02 19:07:48,751 [wrapper] pandaids: 6993186805 6993186805
[2026-02-02 14:07:48] 2026-02-02 19:07:48,806 [wrapper] cleanup supervisor_pilot   683 12079
[2026-02-02 14:07:48] 2026-02-02 19:07:48,808 [wrapper] Test setup, not cleaning
[2026-02-02 14:07:48] 2026-02-02 19:07:48,811 [wrapper] apfmon messages muted
[2026-02-02 14:07:48] 2026-02-02 19:07:48,814 [wrapper] ==== wrapper stdout END ====
[2026-02-02 14:07:48] 2026-02-02 19:07:48,817 [wrapper] ==== wrapper stderr END ====
[2026-02-02 14:07:48]  *** Error codes and diagnostics ***
[2026-02-02 14:07:48]     "exeErrorCode": 0,
[2026-02-02 14:07:48]     "exeErrorDiag": "",
[2026-02-02 14:07:48]     "pilotErrorCode": 0,
[2026-02-02 14:07:48]     "pilotErrorDiag": "",
[2026-02-02 14:07:48]  *** Listing of results directory ***
[2026-02-02 14:07:48] total 1149000
[2026-02-02 14:07:48] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas    584422 Feb  2 02:08 pilot3.tar.gz
[2026-02-02 14:07:48] -rwx------ 1 boincer umatlas     36322 Feb  2 02:10 runpilot2-wrapper.sh
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas      5111 Feb  2 02:13 queuedata.json
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas       100 Feb  2 08:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 14:07:48] -rwxr-xr-x 1 boincer umatlas      7986 Feb  2 08:59 run_atlas
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas       105 Feb  2 08:59 job.xml
[2026-02-02 14:07:48] -rw-r--r-- 3 boincer umatlas 493448496 Feb  2 08:59 EVNT.48318032._000102.pool.root.1
[2026-02-02 14:07:48] -rw-r--r-- 3 boincer umatlas 493448496 Feb  2 08:59 ATLAS.root_0
[2026-02-02 14:07:48] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 08:59 start_atlas.sh
[2026-02-02 14:07:48] drwxrwx--x 2 boincer umatlas      4096 Feb  2 08:59 shared
[2026-02-02 14:07:48] -rw-r--r-- 2 boincer umatlas    597778 Feb  2 08:59 input.tar.gz
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas         0 Feb  2 08:59 boinc_lockfile
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas      2537 Feb  2 11:14 pandaJob.out
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas        57 Feb  2 11:14 setup.sh.local
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas   1009772 Feb  2 11:14 agis_schedconf.cvmfs.json
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas       438 Feb  2 11:14 workernode_map.json
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas      6038 Feb  2 14:04 init_data.xml
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas 181974337 Feb  2 14:06 HITS.48318034._005264.pool.root.1
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas       532 Feb  2 14:06 boinc_task_state.xml
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas        96 Feb  2 14:07 pilot_heartbeat.json
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas      1043 Feb  2 14:07 memory_monitor_summary.json
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas   1511668 Feb  2 14:07 agis_ddmendpoints.agis.ALL.json
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas    437267 Feb  2 14:07 log.48318034._005264.job.log.tgz.1
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas      6393 Feb  2 14:07 heartbeat.json
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas        29 Feb  2 14:07 wrapper_checkpoint.txt
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas      8192 Feb  2 14:07 boinc_mmap_file
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas       820 Feb  2 14:07 pilotlog.txt
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas   1445209 Feb  2 14:07 log.48318034._005264.job.log.1
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas       357 Feb  2 14:07 output.list
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas       620 Feb  2 14:07 runtime_log
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas   1904640 Feb  2 14:07 result.tar.gz
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas      9417 Feb  2 14:07 runtime_log.err
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas       783 Feb  2 14:07 15yMDm3F368nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrMSKDmQdPZJm.diag
[2026-02-02 14:07:48] -rw-r--r-- 1 boincer umatlas     23172 Feb  2 14:07 stderr.txt
[2026-02-02 14:07:48] HITS file was successfully produced:
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas 181974337 Feb  2 14:06 shared/HITS.pool.root.1
[2026-02-02 14:07:48]  *** Contents of shared directory: ***
[2026-02-02 14:07:48] total 662060
[2026-02-02 14:07:48] -rw-r--r-- 3 boincer umatlas 493448496 Feb  2 08:59 ATLAS.root_0
[2026-02-02 14:07:48] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 08:59 start_atlas.sh
[2026-02-02 14:07:48] -rw-r--r-- 2 boincer umatlas    597778 Feb  2 08:59 input.tar.gz
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas 181974337 Feb  2 14:06 HITS.pool.root.1
[2026-02-02 14:07:48] -rw------- 1 boincer umatlas   1904640 Feb  2 14:07 result.tar.gz
14:07:50 (45267): run_atlas exited; CPU time 78273.486843
14:07:50 (45267): called boinc_finish(0)

</stderr_txt>
]]>

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