Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:08:50 (3023715): wrapper (7.7.26015): starting
10:08:50 (3023715): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 10:08:50] Arguments: --nthreads 12
[2026-02-02 10:08:50] Threads: 12
[2026-02-02 10:08:50] Checking for CVMFS
[2026-02-02 10:08:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 10:08:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 10:08:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 10:08:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 10:08:51] 2.11.5.0 709636 91467 261200 155796 3 507 38061571 45568000 15105 130560 0 775723224 99.824 408951326 26260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-02 10:08:51] CVMFS is ok
[2026-02-02 10:08:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 10:08:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 10:08:51] Further information can be found at the LHC@home message board.
[2026-02-02 10:08:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 10:08:51] Checking for apptainer binary...
[2026-02-02 10:08:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 10:08:51] Running /usr/bin/apptainer --version
[2026-02-02 10:08:51] apptainer version 1.4.1-1.el9
[2026-02-02 10:08:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 10:08:52] wns0033.triumf.lcg
[2026-02-02 10:08:52] apptainer works
[2026-02-02 10:08:52] Set ATHENA_PROC_NUMBER=12
[2026-02-02 10:08:52] Set ATHENA_CORE_NUMBER=12
[2026-02-02 10:08:52] Starting ATLAS job with PandaID=6993188215
[2026-02-02 10:08:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 10:13:45]  *** The last 200 lines of the pilot log: ***
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | WARNING  | wrong length of table data, x=[1770055826.0], y=[1283.0] (must be same and length>=4)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | ..............................
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . Timing measurements:
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . get job = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . initial setup = 19 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . payload setup = 14 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . stage-in = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . payload execution = 61 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . stage-out = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . log creation = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | ..............................
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-02 10:13:45] 2026-02-02 18:13:00,332 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993188215/pilotlog.txt
[2026-02-02 10:13:45] 2026-02-02 18:13:00,344 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-02 10:13:45] - Log from pilotlog.txt -
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6993188215/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | INFO     | extracted standard info from prmon json
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | WARNING  | wrong length of table data, x=[1770055826.0], y=[1283.0] (must be same and length>=4)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | ..............................
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . Timing measurements:
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . get job = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . initial setup = 19 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . payload setup = 14 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . stage-in = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . payload execution = 61 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . stage-out = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . log creation = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | ..............................
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-02 10:13:45] 2026-02-02 18:13:00,332 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993188215/pilotlog.txt
[2026-02-02 10:13:45] 2026-02-02 18:13:00,344 | WARNING  | 
[2026-02-02 10:13:45] [begin log extracts]
[2026-02-02 10:13:45] - Log from pilotlog.txt -
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6993188215/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | INFO     | extracted standard info from prmon json
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 10:13:45] 2026-02-02 18:13:00,330 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | WARNING  | wrong length of table data, x=[1770055826.0], y=[1283.0] (must be same and length>=4)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | ..............................
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . Timing measurements:
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . get job = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . initial setup = 19 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . payload setup = 14 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . stage-in = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . payload execution = 61 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . stage-out = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | . log creation = 0 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | ..............................
[2026-02-02 10:13:45] 2026-02-02 18:13:00,331 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-02 10:13:45] 2026-02-02 18:13:00,332 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993188215/pilotlog.txt
[2026-02-02 10:13:45] [end log extracts]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,344 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,345 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-02 10:13:45] 2026-02-02 18:13:00,842 | INFO     | 
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | job summary report
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | --------------------------------------------------
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | PanDA job id: 6993188215
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | task id: 48318034
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-02 10:10:52,539 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | pilot state: failed 
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | transexitcode: 65
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | exeerrorcode: 65
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | exitcode: 65
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | cpuconsumptiontime: 13 s
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | nevents: 0
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | neventsw: 0
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | pid: 3032394
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | pgrp: 3032394
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | corecount: 12
[2026-02-02 10:13:45] 2026-02-02 18:13:00,843 | INFO     | event service: False
[2026-02-02 10:13:45] 2026-02-02 18:13:00,844 | INFO     | sizes: {0: 2277798, 1: 2278259, 79: 2301457, 81: 2305749, 82: 2305805, 198: 2305999}
[2026-02-02 10:13:45] 2026-02-02 18:13:00,844 | INFO     | --------------------------------------------------
[2026-02-02 10:13:45] 2026-02-02 18:13:00,844 | INFO     | 
[2026-02-02 10:13:45] 2026-02-02 18:13:00,844 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-02 10:13:45] 2026-02-02 18:13:00,869 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,869 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,869 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 10:13:45] 2026-02-02 18:13:00,870 | INFO     | job 6993188215 has completed (purged errors)
[2026-02-02 10:13:45] 2026-02-02 18:13:00,871 | INFO     | overall cleanup function is called
[2026-02-02 10:13:45] 2026-02-02 18:13:01,878 | INFO     | --- collectZombieJob: --- 10, [3032394]
[2026-02-02 10:13:45] 2026-02-02 18:13:01,879 | INFO     | zombie collector waiting for pid 3032394
[2026-02-02 10:13:45] 2026-02-02 18:13:01,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 10:13:45] 2026-02-02 18:13:01,879 | INFO     | collected zombie processes
[2026-02-02 10:13:45] 2026-02-02 18:13:01,879 | INFO     | will attempt to kill all subprocesses of pid=3032394
[2026-02-02 10:13:45] 2026-02-02 18:13:02,284 | INFO     | process IDs to be killed: [3032394] (in reverse order)
[2026-02-02 10:13:45] 2026-02-02 18:13:02,394 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 10:13:45] 2026-02-02 18:13:02,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 10:13:45] 2026-02-02 18:13:02,416 | INFO     | did not find any defunct processes belonging to 3032394
[2026-02-02 10:13:45] 2026-02-02 18:13:02,438 | INFO     | did not find any defunct processes belonging to 3032394
[2026-02-02 10:13:45] 2026-02-02 18:13:02,438 | INFO     | ready for new job
[2026-02-02 10:13:45] 2026-02-02 18:13:02,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 10:13:45] 2026-02-02 18:13:02,444 | INFO     | **************************************
[2026-02-02 10:13:45] 2026-02-02 18:13:02,445 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 10:13:45] 2026-02-02 18:13:02,445 | INFO     | **************************************
[2026-02-02 10:13:45] 2026-02-02 18:13:02,445 | INFO     | 
[2026-02-02 10:13:45] 2026-02-02 18:13:02,447 | INFO     | architecture information:
[2026-02-02 10:13:45] 2026-02-02 18:13:02,455 | INFO     | executing command: cat /etc/os-release
[2026-02-02 10:13:45] 2026-02-02 18:13:02,469 | INFO     | cat /etc/os-release:
[2026-02-02 10:13:45] NAME="CentOS Linux"
[2026-02-02 10:13:45] VERSION="7 (Core)"
[2026-02-02 10:13:45] ID="centos"
[2026-02-02 10:13:45] ID_LIKE="rhel fedora"
[2026-02-02 10:13:45] VERSION_ID="7"
[2026-02-02 10:13:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 10:13:45] ANSI_COLOR="0;31"
[2026-02-02 10:13:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 10:13:45] HOME_URL="https://www.centos.org/"
[2026-02-02 10:13:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 10:13:45] 
[2026-02-02 10:13:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 10:13:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 10:13:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 10:13:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 10:13:45] 
[2026-02-02 10:13:45] 2026-02-02 18:13:02,470 | INFO     | **************************************
[2026-02-02 10:13:45] 2026-02-02 18:13:02,974 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-02 10:13:45] 2026-02-02 18:13:03,180 | INFO     | sufficient remaining disk space (2097157242880 B)
[2026-02-02 10:13:45] 2026-02-02 18:13:03,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 10:13:45] 2026-02-02 18:13:03,181 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 10:13:45] 2026-02-02 18:13:03,181 | INFO     | update_server=False
[2026-02-02 10:13:45] 2026-02-02 18:13:03,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 10:13:45] 2026-02-02 18:13:03,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 10:13:45] 2026-02-02 18:13:03,418 | INFO     | all data control threads have been joined
[2026-02-02 10:13:45] 2026-02-02 18:13:03,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 10:13:45] 2026-02-02 18:13:03,452 | INFO     | aborting loop
[2026-02-02 10:13:45] 2026-02-02 18:13:03,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 10:13:45] 2026-02-02 18:13:04,055 | INFO     | all payload control threads have been joined
[2026-02-02 10:13:45] 2026-02-02 18:13:04,187 | INFO     | [job] retrieve thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:04,327 | INFO     | [data] copytool_in thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:04,428 | INFO     | all job control threads have been joined
[2026-02-02 10:13:45] 2026-02-02 18:13:04,432 | INFO     | [data] control thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:04,458 | INFO     | [job] job monitor thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:04,650 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,036 | INFO     | [job] validate thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,061 | INFO     | [payload] control thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,185 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,372 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,434 | INFO     | [job] control thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 10:13:45] 2026-02-02 18:13:05,527 | INFO     | [data] copytool_out thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,531 | INFO     | [payload] failed_post thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,543 | INFO     | [payload] validate_post thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:05,686 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:06,454 | INFO     | [job] queue monitor thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:07,210 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 10:13:45] 2026-02-02 18:13:33,629 | INFO     | PID=3027790 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 10:13:45] 2026-02-02 18:13:33,629 | INFO     | .. there are 28 such processes running
[2026-02-02 10:13:45] 2026-02-02 18:13:33,630 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 10:13:45] 2026-02-02 18:13:33,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 10:13:45] 2026-02-02 18:13:33,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 10:13:45] 2026-02-02 18:13:39,754 | INFO     | [monitor] cgroup control has ended
[2026-02-02 10:13:45] 2026-02-02 18:13:39,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014668371776)>', '<ExcThread(monitor, started 140013970904832)>']
[2026-02-02 10:13:45] 2026-02-02 18:13:40,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 10:13:45] 2026-02-02 18:13:40,672 | INFO     | [monitor] control thread has ended
[2026-02-02 10:13:45] 2026-02-02 18:13:44,832 | INFO     | all workflow threads have been joined
[2026-02-02 10:13:45] 2026-02-02 18:13:44,832 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 10:13:45] 2026-02-02 18:13:44,833 | INFO     | traces error code: 0
[2026-02-02 10:13:45] 2026-02-02 18:13:44,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 10:13:45] 2026-02-02 18:13:45,027 [wrapper] ==== pilot stdout END ====
[2026-02-02 10:13:45] 2026-02-02 18:13:45,049 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 10:13:45] 2026-02-02 18:13:45,092 [wrapper] pilotpid: 3027790
[2026-02-02 10:13:45] 2026-02-02 18:13:45,105 [wrapper] Pilot exit status: 0
[2026-02-02 10:13:45] 2026-02-02 18:13:45,199 [wrapper] pandaids: 6993188215
[2026-02-02 10:13:45] 2026-02-02 18:13:45,584 [wrapper] cleanup supervisor_pilot 3027796 3027791
[2026-02-02 10:13:45] 2026-02-02 18:13:45,588 [wrapper] Test setup, not cleaning
[2026-02-02 10:13:45] 2026-02-02 18:13:45,589 [wrapper] apfmon messages muted
[2026-02-02 10:13:45] 2026-02-02 18:13:45,591 [wrapper] ==== wrapper stdout END ====
[2026-02-02 10:13:45] 2026-02-02 18:13:45,593 [wrapper] ==== wrapper stderr END ====
[2026-02-02 10:13:45]  *** Error codes and diagnostics ***
[2026-02-02 10:13:45]     "exeErrorCode": 65,
[2026-02-02 10:13:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-02 10:13:45]     "pilotErrorCode": 1305,
[2026-02-02 10:13:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-02 10:13:45]  *** Listing of results directory ***
[2026-02-02 10:13:45] total 489380
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc    584422 Feb  2 05:12 pilot3.tar.gz
[2026-02-02 10:13:45] -rwx------. 1 boinc boinc     36322 Feb  2 05:12 runpilot2-wrapper.sh
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc      5111 Feb  2 05:13 queuedata.json
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc       100 Feb  2 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 10:13:45] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 10:08 run_atlas
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc       105 Feb  2 10:08 job.xml
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc      6593 Feb  2 10:08 init_data.xml
[2026-02-02 10:13:45] -rw-r--r--. 2 boinc boinc 496972272 Feb  2 10:08 EVNT.48318032._000109.pool.root.1
[2026-02-02 10:13:45] -rw-r--r--. 2 boinc boinc     15845 Feb  2 10:08 start_atlas.sh
[2026-02-02 10:13:45] drwxrwx--x. 2 boinc boinc      4096 Feb  2 10:08 shared
[2026-02-02 10:13:45] -rw-r--r--. 2 boinc boinc    597763 Feb  2 10:08 input.tar.gz
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc         0 Feb  2 10:08 boinc_lockfile
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc      2535 Feb  2 10:08 pandaJob.out
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc   1009774 Feb  2 10:09 agis_schedconf.cvmfs.json
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc   1511668 Feb  2 10:09 agis_ddmendpoints.agis.ALL.json
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc       445 Feb  2 10:09 workernode_map.json
[2026-02-02 10:13:45] drwx------. 5 boinc boinc      4096 Feb  2 10:09 pilot3
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc       523 Feb  2 10:10 boinc_task_state.xml
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc       965 Feb  2 10:10 memory_monitor_summary.json
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc     21865 Feb  2 10:11 log.48318034._005547.job.log.tgz.1
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc      7013 Feb  2 10:13 heartbeat.json
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc        95 Feb  2 10:13 pilot_heartbeat.json
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc      8192 Feb  2 10:13 boinc_mmap_file
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc        22 Feb  2 10:13 wrapper_checkpoint.txt
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc      4819 Feb  2 10:13 pilotlog.txt
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc     86372 Feb  2 10:13 log.48318034._005547.job.log.1
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc       188 Feb  2 10:13 output.list
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc       620 Feb  2 10:13 runtime_log
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc    122880 Feb  2 10:13 result.tar.gz
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc      8635 Feb  2 10:13 runtime_log.err
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc       643 Feb  2 10:13 7v5NDmnu868nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxoSKDmFFSYPm.diag
[2026-02-02 10:13:45] -rw-r--r--. 1 boinc boinc     21766 Feb  2 10:13 stderr.txt
[2026-02-02 10:13:45] No HITS result produced
[2026-02-02 10:13:45]  *** Contents of shared directory: ***
[2026-02-02 10:13:45] total 486052
[2026-02-02 10:13:45] -rw-r--r--. 2 boinc boinc 496972272 Feb  2 10:08 ATLAS.root_0
[2026-02-02 10:13:45] -rw-r--r--. 2 boinc boinc     15845 Feb  2 10:08 start_atlas.sh
[2026-02-02 10:13:45] -rw-r--r--. 2 boinc boinc    597763 Feb  2 10:08 input.tar.gz
[2026-02-02 10:13:45] -rw-------. 1 boinc boinc    122880 Feb  2 10:13 result.tar.gz
10:13:46 (3023715): run_atlas exited; CPU time 21.107340
10:13:46 (3023715): called boinc_finish(0)

</stderr_txt>
]]>

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