Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:03:33 (29254): wrapper (7.7.26015): starting
22:03:33 (29254): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 22:03:33] Arguments: --nthreads 8
[2026-02-02 22:03:33] Threads: 8
[2026-02-02 22:03:33] Checking for CVMFS
[2026-02-02 22:03:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 22:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 22:03:36] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 22:03:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 22:03:37] 2.11.2.0 6904 70491 134460 155805 1 87 19584244 25165824 3415 130560 0 26670462 99.840 17226699 3067 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-02 22:03:37] CVMFS is ok
[2026-02-02 22:03:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 22:03:37] Checking for apptainer binary...
[2026-02-02 22:03:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 22:03:37] Running /usr/bin/apptainer --version
[2026-02-02 22:03:37] apptainer version 1.3.2-1.el7
[2026-02-02 22:03:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 22:03:56] cg-vwn474.simple-grid.lan
[2026-02-02 22:03:56] apptainer works
[2026-02-02 22:03:56] Set ATHENA_PROC_NUMBER=8
[2026-02-02 22:03:56] Set ATHENA_CORE_NUMBER=8
[2026-02-02 22:03:56] Starting ATLAS job with PandaID=6991519687
[2026-02-02 22:03:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 01:54:17]  *** The last 200 lines of the pilot log: ***
[2026-02-03 01:54:17] 2026-02-03 00:53:03,365 | INFO     | job 6991519687 has state=finished
[2026-02-03 01:54:17] 2026-02-03 00:53:03,365 | INFO     | preparing for final server update for job 6991519687 in state='finished'
[2026-02-03 01:54:17] 2026-02-03 00:53:03,366 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-6991519687/jobReport.json
[2026-02-03 01:54:17] 2026-02-03 00:53:03,368 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-02-03 01:54:17] 2026-02-03 00:53:03,369 | INFO     | this job has now completed (state=finished)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,369 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,369 | INFO     | log transfer has been attempted: DONE
[2026-02-03 01:54:17] 2026-02-03 00:53:03,369 | INFO     | job 6991519687 has finished - writing final server update
[2026-02-03 01:54:17] 2026-02-03 00:53:03,370 | INFO     | total number of processed events: 400 (read)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,372 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6991519687/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,373 | INFO     | extracted standard info from prmon json
[2026-02-03 01:54:17] 2026-02-03 00:53:03,373 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 01:54:17] 2026-02-03 00:53:03,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 01:54:17] 2026-02-03 00:53:03,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 01:54:17] 2026-02-03 00:53:03,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 01:54:17] 2026-02-03 00:53:03,378 | INFO     | fitting pss+swap vs Time
[2026-02-03 01:54:17] 2026-02-03 00:53:03,379 | INFO     | sum of square deviations: 3168461268.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,381 | INFO     | sum of deviations: 51168084049.99999
[2026-02-03 01:54:17] 2026-02-03 00:53:03,384 | INFO     | mean x: 1770073335.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,384 | INFO     | mean y: 2445432.801843318
[2026-02-03 01:54:17] 2026-02-03 00:53:03,385 | INFO     | intersect: -28582805740.90567
[2026-02-03 01:54:17] 2026-02-03 00:53:03,385 | INFO     | chi2: 4.410103392978112
[2026-02-03 01:54:17] 2026-02-03 00:53:03,385 | INFO     | sum of square deviations: 2954447953.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,387 | INFO     | sum of deviations: 64635113250.49998
[2026-02-03 01:54:17] 2026-02-03 00:53:03,387 | INFO     | mean x: 1770073182.5
[2026-02-03 01:54:17] 2026-02-03 00:53:03,387 | INFO     | mean y: 2454833.495283019
[2026-02-03 01:54:17] 2026-02-03 00:53:03,388 | INFO     | intersect: -38721828833.9112
[2026-02-03 01:54:17] 2026-02-03 00:53:03,388 | INFO     | chi2: 3.621171910790644
[2026-02-03 01:54:17] 2026-02-03 00:53:03,388 | INFO     | current chi2=3.621171910790644 (change=17.889183356644793 %)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,388 | INFO     | right removable region: 211
[2026-02-03 01:54:17] 2026-02-03 00:53:03,389 | INFO     | sum of square deviations: 2954447953.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,391 | INFO     | sum of deviations: -10961346962.5
[2026-02-03 01:54:17] 2026-02-03 00:53:03,391 | INFO     | mean x: 1770073487.5
[2026-02-03 01:54:17] 2026-02-03 00:53:03,391 | INFO     | mean y: 2489550.853773585
[2026-02-03 01:54:17] 2026-02-03 00:53:03,391 | INFO     | intersect: 6569668920.491464
[2026-02-03 01:54:17] 2026-02-03 00:53:03,391 | INFO     | chi2: 1.062663080207849
[2026-02-03 01:54:17] 2026-02-03 00:53:03,392 | INFO     | current chi2=1.062663080207849 (change=75.90389645059456 %)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,392 | INFO     | sum of square deviations: 2750295288.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,394 | INFO     | sum of deviations: -25550952819.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,394 | INFO     | mean x: 1770073640.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,394 | INFO     | mean y: 2500394.657004831
[2026-02-03 01:54:17] 2026-02-03 00:53:03,394 | INFO     | intersect: 16446941200.387531
[2026-02-03 01:54:17] 2026-02-03 00:53:03,394 | INFO     | chi2: 0.8524528319963441
[2026-02-03 01:54:17] 2026-02-03 00:53:03,395 | INFO     | current chi2=0.8524528319963441 (change=19.781457747679468 %)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,395 | INFO     | left removable region: 20
[2026-02-03 01:54:17] 2026-02-03 00:53:03,395 | INFO     | sum of square deviations: 2160561440.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,397 | INFO     | sum of deviations: -10535133039.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,397 | INFO     | mean x: 1770073762.0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,397 | INFO     | mean y: 2511353.602094241
[2026-02-03 01:54:17] 2026-02-03 00:53:03,397 | INFO     | intersect: 8633583919.40389
[2026-02-03 01:54:17] 2026-02-03 00:53:03,397 | INFO     | chi2: 0.013535978074416486
[2026-02-03 01:54:17] 2026-02-03 00:53:03,398 | INFO     | current memory leak: -4.88 B/s (using 191 data points, chi2=0.01)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,398 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,398 | INFO     | ..............................
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | . Timing measurements:
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | . get job = 0 s
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | . initial setup = 88 s
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | . payload setup = 113 s
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | . stage-in = 0 s
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | . payload execution = 13334 s
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | . stage-out = 3 s
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | . log creation = 1 s
[2026-02-03 01:54:17] 2026-02-03 00:53:03,399 | INFO     | ..............................
[2026-02-03 01:54:17] 2026-02-03 00:53:03,512 | INFO     | 
[2026-02-03 01:54:17] 2026-02-03 00:53:03,512 | INFO     | job summary report
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | --------------------------------------------------
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | PanDA job id: 6991519687
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | task id: 48310749
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | errors: (none)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | pilot state: finished 
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | transexitcode: 0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | exeerrorcode: 0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,513 | INFO     | exeerrordiag: 
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | exitcode: 0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | exitmsg: OK
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | cpuconsumptiontime: 49556 s
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | nevents: 400
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | neventsw: 0
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | pid: 5784
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | pgrp: 5784
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | corecount: 8
[2026-02-03 01:54:17] 2026-02-03 00:53:03,514 | INFO     | event service: False
[2026-02-03 01:54:17] 2026-02-03 00:53:03,515 | INFO     | sizes: {0: 2277732, 1: 2278249, 13452: 2308356, 13456: 2317354, 13459: 2317438, 13460: 2317632}
[2026-02-03 01:54:17] 2026-02-03 00:53:03,515 | INFO     | --------------------------------------------------
[2026-02-03 01:54:17] 2026-02-03 00:53:03,515 | INFO     | 
[2026-02-03 01:54:17] 2026-02-03 00:53:03,515 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-03 01:54:17] 2026-02-03 00:53:03,943 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,944 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,944 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,944 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 01:54:17] 2026-02-03 00:53:03,946 | INFO     | job 6991519687 has completed (purged errors)
[2026-02-03 01:54:17] 2026-02-03 00:53:03,946 | INFO     | overall cleanup function is called
[2026-02-03 01:54:17] 2026-02-03 00:53:04,955 | INFO     | --- collectZombieJob: --- 10, [5784]
[2026-02-03 01:54:17] 2026-02-03 00:53:04,955 | INFO     | zombie collector waiting for pid 5784
[2026-02-03 01:54:17] 2026-02-03 00:53:04,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 01:54:17] 2026-02-03 00:53:04,956 | INFO     | collected zombie processes
[2026-02-03 01:54:17] 2026-02-03 00:53:04,956 | INFO     | will attempt to kill all subprocesses of pid=5784
[2026-02-03 01:54:17] 2026-02-03 00:53:05,092 | INFO     | process IDs to be killed: [5784] (in reverse order)
[2026-02-03 01:54:17] 2026-02-03 00:53:05,719 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 01:54:17] 2026-02-03 00:53:05,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 01:54:17] 2026-02-03 00:53:05,722 | INFO     | did not find any defunct processes belonging to 5784
[2026-02-03 01:54:17] 2026-02-03 00:53:05,725 | INFO     | did not find any defunct processes belonging to 5784
[2026-02-03 01:54:17] 2026-02-03 00:53:05,725 | INFO     | ready for new job
[2026-02-03 01:54:17] 2026-02-03 00:53:05,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 01:54:17] 2026-02-03 00:53:05,727 | INFO     | **************************************
[2026-02-03 01:54:17] 2026-02-03 00:53:05,727 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 01:54:17] 2026-02-03 00:53:05,727 | INFO     | **************************************
[2026-02-03 01:54:17] 2026-02-03 00:53:05,727 | INFO     | 
[2026-02-03 01:54:17] 2026-02-03 00:53:05,728 | INFO     | pilot is running in a VM
[2026-02-03 01:54:17] 2026-02-03 00:53:05,728 | INFO     | architecture information:
[2026-02-03 01:54:17] 2026-02-03 00:53:05,728 | INFO     | executing command: cat /etc/os-release
[2026-02-03 01:54:17] 2026-02-03 00:53:06,006 | INFO     | cat /etc/os-release:
[2026-02-03 01:54:17] NAME="CentOS Linux"
[2026-02-03 01:54:17] VERSION="7 (Core)"
[2026-02-03 01:54:17] ID="centos"
[2026-02-03 01:54:17] ID_LIKE="rhel fedora"
[2026-02-03 01:54:17] VERSION_ID="7"
[2026-02-03 01:54:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 01:54:17] ANSI_COLOR="0;31"
[2026-02-03 01:54:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 01:54:17] HOME_URL="https://www.centos.org/"
[2026-02-03 01:54:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 01:54:17] 
[2026-02-03 01:54:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 01:54:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 01:54:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 01:54:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 01:54:17] 
[2026-02-03 01:54:17] 2026-02-03 00:53:06,007 | INFO     | **************************************
[2026-02-03 01:54:17] 2026-02-03 00:53:06,510 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-03 01:54:17] 2026-02-03 00:53:06,753 | INFO     | sufficient remaining disk space (494778974208 B)
[2026-02-03 01:54:17] 2026-02-03 00:53:06,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 01:54:17] 2026-02-03 00:53:06,753 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 01:54:17] 2026-02-03 00:53:06,753 | INFO     | update_server=False
[2026-02-03 01:54:17] 2026-02-03 00:53:06,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 01:54:17] 2026-02-03 00:53:06,754 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:54:17] 2026-02-03 00:53:06,754 | INFO     | aborting loop
[2026-02-03 01:54:17] 2026-02-03 00:53:06,856 | INFO     | all job control threads have been joined
[2026-02-03 01:54:17] 2026-02-03 00:53:07,025 | INFO     | all data control threads have been joined
[2026-02-03 01:54:17] 2026-02-03 00:53:07,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 01:54:17] 2026-02-03 00:53:07,758 | INFO     | [job] retrieve thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:07,761 | INFO     | [job] job monitor thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:07,810 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:07,861 | INFO     | [job] control thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:07,947 | INFO     | [data] copytool_in thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:08,031 | INFO     | [data] control thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:08,176 | INFO     | [payload] validate_post thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:08,262 | INFO     | all payload control threads have been joined
[2026-02-03 01:54:17] 2026-02-03 00:53:08,330 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:08,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:54:17] 2026-02-03 00:53:08,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 01:54:17] 2026-02-03 00:53:08,839 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:09,044 | INFO     | [job] validate thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:09,126 | INFO     | [payload] failed_post thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:09,268 | INFO     | [payload] control thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:09,398 | INFO     | [data] copytool_out thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:09,531 | INFO     | [job] queue monitor thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:12,738 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:17,160 | INFO     | job.realtimelogging is not enabled
[2026-02-03 01:54:17] 2026-02-03 00:53:18,166 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 01:54:17] 2026-02-03 00:53:35,719 | INFO     | PID=1121 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-03 01:54:17] 2026-02-03 00:53:35,719 | INFO     | .. there are 9 such processes running
[2026-02-03 01:54:17] 2026-02-03 00:53:35,720 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 01:54:17] 2026-02-03 00:53:35,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 01:54:17] 2026-02-03 00:53:35,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 01:54:17] 2026-02-03 00:54:05,562 | INFO     | [monitor] cgroup control has ended
[2026-02-03 01:54:17] 2026-02-03 00:54:07,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139808663660352)>', '<ExcThread(monitor, started 139808064124672)>']
[2026-02-03 01:54:17] 2026-02-03 00:54:07,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 01:54:17] 2026-02-03 00:54:07,904 | INFO     | [monitor] control thread has ended
[2026-02-03 01:54:17] 2026-02-03 00:54:12,428 | INFO     | all workflow threads have been joined
[2026-02-03 01:54:17] 2026-02-03 00:54:12,428 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 01:54:17] 2026-02-03 00:54:12,429 | INFO     | traces error code: 0
[2026-02-03 01:54:17] 2026-02-03 00:54:12,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 01:54:17] 2026-02-03 00:54:12,601 [wrapper] ==== pilot stdout END ====
[2026-02-03 01:54:17] 2026-02-03 00:54:12,652 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 01:54:17] 2026-02-03 00:54:12,717 [wrapper] pilotpid: 1121
[2026-02-03 01:54:17] 2026-02-03 00:54:12,797 [wrapper] Pilot exit status: 0
[2026-02-03 01:54:17] 2026-02-03 00:54:13,227 [wrapper] pandaids: 6991519687
[2026-02-03 01:54:17] 2026-02-03 00:54:14,215 [wrapper] cleanup supervisor_pilot 21755 1122
[2026-02-03 01:54:17] 2026-02-03 00:54:14,328 [wrapper] Test setup, not cleaning
[2026-02-03 01:54:17] 2026-02-03 00:54:14,375 [wrapper] apfmon messages muted
[2026-02-03 01:54:17] 2026-02-03 00:54:14,469 [wrapper] ==== wrapper stdout END ====
[2026-02-03 01:54:17] 2026-02-03 00:54:14,506 [wrapper] ==== wrapper stderr END ====
[2026-02-03 01:54:17]  *** Error codes and diagnostics ***
[2026-02-03 01:54:17]     "exeErrorCode": 0,
[2026-02-03 01:54:17]     "exeErrorDiag": "",
[2026-02-03 01:54:17]     "pilotErrorCode": 0,
[2026-02-03 01:54:17]     "pilotErrorDiag": "",
[2026-02-03 01:54:17]  *** Listing of results directory ***
[2026-02-03 01:54:17] total 671800
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc    584422 Feb  1 13:55 pilot3.tar.gz
[2026-02-03 01:54:17] -rwx------. 1 boinc boinc     36322 Feb  1 13:56 runpilot2-wrapper.sh
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc      5111 Feb  1 13:57 queuedata.json
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc       100 Feb  2 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 01:54:17] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 22:03 run_atlas
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc       105 Feb  2 22:03 job.xml
[2026-02-03 01:54:17] -rw-r--r--. 2 boinc boinc 498830794 Feb  2 22:03 EVNT.48310747._000051.pool.root.1
[2026-02-03 01:54:17] -rw-r--r--. 2 boinc boinc     15845 Feb  2 22:03 start_atlas.sh
[2026-02-03 01:54:17] drwxrwx--x. 2 boinc boinc        68 Feb  2 22:03 shared
[2026-02-03 01:54:17] -rw-r--r--. 2 boinc boinc    597752 Feb  2 22:03 input.tar.gz
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc         0 Feb  2 22:03 boinc_lockfile
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc      2522 Feb  2 22:03 pandaJob.out
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc      6393 Feb  2 22:05 init_data.xml
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc       415 Feb  2 22:08 workernode_map.json
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc   1009316 Feb  2 22:08 agis_schedconf.cvmfs.json
[2026-02-03 01:54:17] drwx------. 5 boinc boinc      4096 Feb  2 22:08 pilot3
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc 180516663 Feb  3 01:51 HITS.48310749._002507.pool.root.1
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc       532 Feb  3 01:52 boinc_task_state.xml
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc      1014 Feb  3 01:52 memory_monitor_summary.json
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc   1511668 Feb  3 01:52 agis_ddmendpoints.agis.ALL.json
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc    441862 Feb  3 01:52 log.48310749._002507.job.log.tgz.1
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc      6319 Feb  3 01:53 heartbeat.json
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc        95 Feb  3 01:53 pilot_heartbeat.json
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc      8192 Feb  3 01:54 boinc_mmap_file
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc        28 Feb  3 01:54 wrapper_checkpoint.txt
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc      4951 Feb  3 01:54 pilotlog.txt
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc   1880891 Feb  3 01:54 log.48310749._002507.job.log.1
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc       357 Feb  3 01:54 output.list
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc       620 Feb  3 01:54 runtime_log
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc   2344960 Feb  3 01:54 result.tar.gz
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc      8816 Feb  3 01:54 runtime_log.err
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc       656 Feb  3 01:54 D7aLDmRBm68n9Rq4apOajLDm4fhM0noT9bVooX4SDm7tPKDmrsmCNo.diag
[2026-02-03 01:54:17] -rw-r--r--. 1 boinc boinc     20845 Feb  3 01:54 stderr.txt
[2026-02-03 01:54:17] HITS file was successfully produced:
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc 180516663 Feb  3 01:51 shared/HITS.pool.root.1
[2026-02-03 01:54:17]  *** Contents of shared directory: ***
[2026-02-03 01:54:17] total 666320
[2026-02-03 01:54:17] -rw-r--r--. 2 boinc boinc 498830794 Feb  2 22:03 ATLAS.root_0
[2026-02-03 01:54:17] -rw-r--r--. 2 boinc boinc     15845 Feb  2 22:03 start_atlas.sh
[2026-02-03 01:54:17] -rw-r--r--. 2 boinc boinc    597752 Feb  2 22:03 input.tar.gz
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc 180516663 Feb  3 01:51 HITS.pool.root.1
[2026-02-03 01:54:17] -rw-------. 1 boinc boinc   2344960 Feb  3 01:54 result.tar.gz
01:54:19 (29254): run_atlas exited; CPU time 49759.145089
01:54:19 (29254): called boinc_finish(0)

</stderr_txt>
]]>

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