Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:39:15 (29658): wrapper (7.7.26015): starting
06:39:15 (29658): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 06:39:15] Arguments: --nthreads 8
[2026-02-02 06:39:15] Threads: 8
[2026-02-02 06:39:15] Checking for CVMFS
[2026-02-02 06:39:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 06:39:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 06:39:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 06:39:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 06:39:16] 2.11.2.0 2795 145288 97996 155785 2 51 18557588 20275201 1 130560 0 33209816 99.791 10189803 28722 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 06:39:16] CVMFS is ok
[2026-02-02 06:39:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 06:39:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 06:39:16] Further information can be found at the LHC@home message board.
[2026-02-02 06:39:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 06:39:16] Checking for apptainer binary...
[2026-02-02 06:39:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 06:39:16] Running /usr/bin/apptainer --version
[2026-02-02 06:39:16] apptainer version 1.3.2-1.el7
[2026-02-02 06:39:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 06:39:17] c-204-18.aglt2.org
[2026-02-02 06:39:17] apptainer works
[2026-02-02 06:39:17] Set ATHENA_PROC_NUMBER=8
[2026-02-02 06:39:17] Set ATHENA_CORE_NUMBER=8
[2026-02-02 06:39:17] Starting ATLAS job with PandaID=6996583995
[2026-02-02 06:39:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 08:45:58]  *** The last 200 lines of the pilot log: ***
[2026-02-02 08:45:58] 2026-02-02 13:45:44,183 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6996583995/jobReport.json
[2026-02-02 08:45:58] 2026-02-02 13:45:44,187 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-02 08:45:58] 2026-02-02 13:45:44,187 | INFO     | this job has now completed (state=finished)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,187 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,188 | INFO     | log transfer has been attempted: DONE
[2026-02-02 08:45:58] 2026-02-02 13:45:44,188 | INFO     | job 6996583995 has finished - writing final server update
[2026-02-02 08:45:58] 2026-02-02 13:45:44,188 | INFO     | total number of processed events: 400 (read)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,191 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996583995/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,191 | INFO     | extracted standard info from prmon json
[2026-02-02 08:45:58] 2026-02-02 13:45:44,192 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 08:45:58] 2026-02-02 13:45:44,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 08:45:58] 2026-02-02 13:45:44,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 08:45:58] 2026-02-02 13:45:44,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 08:45:58] 2026-02-02 13:45:44,195 | INFO     | fitting pss+swap vs Time
[2026-02-02 08:45:58] 2026-02-02 13:45:44,195 | INFO     | sum of square deviations: 591173875.0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,196 | INFO     | sum of deviations: 991004108.9999993
[2026-02-02 08:45:58] 2026-02-02 13:45:44,196 | INFO     | mean x: 1770036157.5
[2026-02-02 08:45:58] 2026-02-02 13:45:44,196 | INFO     | mean y: 2522545.9032258065
[2026-02-02 08:45:58] 2026-02-02 13:45:44,196 | INFO     | intersect: -2964646977.887165
[2026-02-02 08:45:58] 2026-02-02 13:45:44,196 | INFO     | chi2: 1.531379682613808
[2026-02-02 08:45:58] 2026-02-02 13:45:44,197 | INFO     | sum of square deviations: 522502820.0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,197 | INFO     | sum of deviations: 942544001.0000015
[2026-02-02 08:45:58] 2026-02-02 13:45:44,197 | INFO     | mean x: 1770036005.0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,197 | INFO     | mean y: 2522446.6974789915
[2026-02-02 08:45:58] 2026-02-02 13:45:44,198 | INFO     | intersect: -3190449445.907347
[2026-02-02 08:45:58] 2026-02-02 13:45:44,198 | INFO     | chi2: 1.5315807416866616
[2026-02-02 08:45:58] 2026-02-02 13:45:44,198 | INFO     | current chi2=1.5315807416866616 (change=-0.013129276503815264 %)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,198 | INFO     | right removable region: 118
[2026-02-02 08:45:58] 2026-02-02 13:45:44,198 | INFO     | sum of square deviations: 522502820.0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,199 | INFO     | sum of deviations: -16644260469.0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,199 | INFO     | mean x: 1770036310.0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,199 | INFO     | mean y: 2560951.5966386553
[2026-02-02 08:45:58] 2026-02-02 13:45:44,199 | INFO     | intersect: 56386841103.85999
[2026-02-02 08:45:58] 2026-02-02 13:45:44,200 | INFO     | chi2: 0.1325556162902197
[2026-02-02 08:45:58] 2026-02-02 13:45:44,200 | INFO     | current chi2=0.1325556162902197 (change=91.3440397704657 %)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,200 | INFO     | sum of square deviations: 459366752.5
[2026-02-02 08:45:58] 2026-02-02 13:45:44,200 | INFO     | sum of deviations: -14761728916.0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,201 | INFO     | mean x: 1770036462.5
[2026-02-02 08:45:58] 2026-02-02 13:45:44,201 | INFO     | mean y: 2556298.403508772
[2026-02-02 08:45:58] 2026-02-02 13:45:44,201 | INFO     | intersect: 56882594500.25531
[2026-02-02 08:45:58] 2026-02-02 13:45:44,201 | INFO     | chi2: 0.12171283010698448
[2026-02-02 08:45:58] 2026-02-02 13:45:44,201 | INFO     | current chi2=0.12171283010698448 (change=8.179801419726958 %)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,201 | INFO     | left removable region: 20
[2026-02-02 08:45:58] 2026-02-02 13:45:44,202 | INFO     | sum of square deviations: 291817564.5
[2026-02-02 08:45:58] 2026-02-02 13:45:44,202 | INFO     | sum of deviations: -6849757344.0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,202 | INFO     | mean x: 1770036584.5
[2026-02-02 08:45:58] 2026-02-02 13:45:44,202 | INFO     | mean y: 2535644.448979592
[2026-02-02 08:45:58] 2026-02-02 13:45:44,202 | INFO     | intersect: 41550141302.11854
[2026-02-02 08:45:58] 2026-02-02 13:45:44,203 | INFO     | chi2: 0.08980265985296511
[2026-02-02 08:45:58] 2026-02-02 13:45:44,203 | INFO     | current memory leak: -23.47 B/s (using 98 data points, chi2=0.09)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,203 | INFO     | could have reported an average CPU frequency of 1695 MHz (8 samples)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,203 | INFO     | ..............................
[2026-02-02 08:45:58] 2026-02-02 13:45:44,203 | INFO     | . Timing measurements:
[2026-02-02 08:45:58] 2026-02-02 13:45:44,204 | INFO     | . get job = 0 s
[2026-02-02 08:45:58] 2026-02-02 13:45:44,204 | INFO     | . initial setup = 8 s
[2026-02-02 08:45:58] 2026-02-02 13:45:44,204 | INFO     | . payload setup = 8 s
[2026-02-02 08:45:58] 2026-02-02 13:45:44,204 | INFO     | . stage-in = 0 s
[2026-02-02 08:45:58] 2026-02-02 13:45:44,204 | INFO     | . payload execution = 7534 s
[2026-02-02 08:45:58] 2026-02-02 13:45:44,204 | INFO     | . stage-out = 0 s
[2026-02-02 08:45:58] 2026-02-02 13:45:44,204 | INFO     | . log creation = 0 s
[2026-02-02 08:45:58] 2026-02-02 13:45:44,204 | INFO     | ..............................
[2026-02-02 08:45:58] 2026-02-02 13:45:44,286 | INFO     | 
[2026-02-02 08:45:58] 2026-02-02 13:45:44,286 | INFO     | job summary report
[2026-02-02 08:45:58] 2026-02-02 13:45:44,287 | INFO     | --------------------------------------------------
[2026-02-02 08:45:58] 2026-02-02 13:45:44,287 | INFO     | PanDA job id: 6996583995
[2026-02-02 08:45:58] 2026-02-02 13:45:44,287 | INFO     | task id: 48317931
[2026-02-02 08:45:58] 2026-02-02 13:45:44,287 | INFO     | errors: (none)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,287 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 08:45:58] 2026-02-02 13:45:44,288 | INFO     | pilot state: finished 
[2026-02-02 08:45:58] 2026-02-02 13:45:44,288 | INFO     | transexitcode: 0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,288 | INFO     | exeerrorcode: 0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,288 | INFO     | exeerrordiag: 
[2026-02-02 08:45:58] 2026-02-02 13:45:44,288 | INFO     | exitcode: 0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,289 | INFO     | exitmsg: OK
[2026-02-02 08:45:58] 2026-02-02 13:45:44,289 | INFO     | cpuconsumptiontime: 56082 s
[2026-02-02 08:45:58] 2026-02-02 13:45:44,289 | INFO     | nevents: 400
[2026-02-02 08:45:58] 2026-02-02 13:45:44,289 | INFO     | neventsw: 0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,289 | INFO     | pid: 5366
[2026-02-02 08:45:58] 2026-02-02 13:45:44,290 | INFO     | pgrp: 5366
[2026-02-02 08:45:58] 2026-02-02 13:45:44,290 | INFO     | corecount: 8
[2026-02-02 08:45:58] 2026-02-02 13:45:44,290 | INFO     | event service: False
[2026-02-02 08:45:58] 2026-02-02 13:45:44,290 | INFO     | sizes: {0: 2278007, 1: 2278241, 11: 2278241, 7547: 2305780, 7549: 2314778, 7551: 2314834, 7552: 2315156}
[2026-02-02 08:45:58] 2026-02-02 13:45:44,290 | INFO     | --------------------------------------------------
[2026-02-02 08:45:58] 2026-02-02 13:45:44,290 | INFO     | 
[2026-02-02 08:45:58] 2026-02-02 13:45:44,291 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 08:45:58] 2026-02-02 13:45:44,323 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,323 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,324 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,324 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,327 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,327 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 08:45:58] 2026-02-02 13:45:44,328 | INFO     | job 6996583995 has completed (purged errors)
[2026-02-02 08:45:58] 2026-02-02 13:45:44,328 | INFO     | overall cleanup function is called
[2026-02-02 08:45:58] 2026-02-02 13:45:44,946 | WARNING  | process 5366 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 08:45:58] 2026-02-02 13:45:45,016 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 08:45:58] 2026-02-02 13:45:45,098 | INFO     | number of running child processes to parent process 5366: 1
[2026-02-02 08:45:58] 2026-02-02 13:45:45,098 | INFO     | maximum number of monitored processes: 6
[2026-02-02 08:45:58] 2026-02-02 13:45:45,099 | INFO     | aborting job monitoring since job object (job id=6996583995) has expired
[2026-02-02 08:45:58] 2026-02-02 13:45:45,336 | INFO     | --- collectZombieJob: --- 10, [5366]
[2026-02-02 08:45:58] 2026-02-02 13:45:45,336 | INFO     | zombie collector waiting for pid 5366
[2026-02-02 08:45:58] 2026-02-02 13:45:45,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 08:45:58] 2026-02-02 13:45:45,343 | INFO     | collected zombie processes
[2026-02-02 08:45:58] 2026-02-02 13:45:45,343 | INFO     | will attempt to kill all subprocesses of pid=5366
[2026-02-02 08:45:58] 2026-02-02 13:45:45,428 | INFO     | process IDs to be killed: [5366] (in reverse order)
[2026-02-02 08:45:58] 2026-02-02 13:45:45,490 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 08:45:58] 2026-02-02 13:45:45,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 08:45:58] 2026-02-02 13:45:45,494 | INFO     | did not find any defunct processes belonging to 5366
[2026-02-02 08:45:58] 2026-02-02 13:45:45,497 | INFO     | did not find any defunct processes belonging to 5366
[2026-02-02 08:45:58] 2026-02-02 13:45:45,497 | INFO     | ready for new job
[2026-02-02 08:45:58] 2026-02-02 13:45:45,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 08:45:58] 2026-02-02 13:45:45,499 | INFO     | **************************************
[2026-02-02 08:45:58] 2026-02-02 13:45:45,499 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 08:45:58] 2026-02-02 13:45:45,499 | INFO     | **************************************
[2026-02-02 08:45:58] 2026-02-02 13:45:45,499 | INFO     | 
[2026-02-02 08:45:58] 2026-02-02 13:45:45,500 | INFO     | architecture information:
[2026-02-02 08:45:58] 2026-02-02 13:45:45,500 | INFO     | executing command: cat /etc/os-release
[2026-02-02 08:45:58] 2026-02-02 13:45:45,519 | INFO     | cat /etc/os-release:
[2026-02-02 08:45:58] NAME="CentOS Linux"
[2026-02-02 08:45:58] VERSION="7 (Core)"
[2026-02-02 08:45:58] ID="centos"
[2026-02-02 08:45:58] ID_LIKE="rhel fedora"
[2026-02-02 08:45:58] VERSION_ID="7"
[2026-02-02 08:45:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 08:45:58] ANSI_COLOR="0;31"
[2026-02-02 08:45:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 08:45:58] HOME_URL="https://www.centos.org/"
[2026-02-02 08:45:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 08:45:58] 
[2026-02-02 08:45:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 08:45:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 08:45:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 08:45:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 08:45:58] 
[2026-02-02 08:45:58] 2026-02-02 13:45:45,519 | INFO     | **************************************
[2026-02-02 08:45:58] 2026-02-02 13:45:46,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 08:45:58] 2026-02-02 13:45:46,041 | INFO     | sufficient remaining disk space (17977835520 B)
[2026-02-02 08:45:58] 2026-02-02 13:45:46,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 08:45:58] 2026-02-02 13:45:46,042 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 08:45:58] 2026-02-02 13:45:46,042 | INFO     | update_server=False
[2026-02-02 08:45:58] 2026-02-02 13:45:46,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 08:45:58] 2026-02-02 13:45:46,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 08:45:58] 2026-02-02 13:45:46,043 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-02 08:45:58] 2026-02-02 13:45:46,043 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 08:45:58] 2026-02-02 13:45:46,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 08:45:58] 2026-02-02 13:45:46,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 08:45:58] 2026-02-02 13:45:46,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 08:45:58] 2026-02-02 13:45:46,045 | INFO     | will abort loop
[2026-02-02 08:45:58] 2026-02-02 13:45:46,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 08:45:58] 2026-02-02 13:45:46,789 | INFO     | all payload control threads have been joined
[2026-02-02 08:45:58] 2026-02-02 13:45:47,043 | INFO     | [job] queue monitor thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,048 | INFO     | [job] retrieve thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,048 | INFO     | [job] job monitor thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,080 | INFO     | all data control threads have been joined
[2026-02-02 08:45:58] 2026-02-02 13:45:47,083 | INFO     | [payload] failed_post thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,139 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,226 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,250 | INFO     | [job] validate thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,404 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,471 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,589 | INFO     | all job control threads have been joined
[2026-02-02 08:45:58] 2026-02-02 13:45:47,705 | INFO     | [payload] validate_post thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:47,794 | INFO     | [payload] control thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:48,085 | INFO     | [data] control thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:48,358 | INFO     | [data] copytool_in thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:48,594 | INFO     | [job] control thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:48,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 08:45:58] 2026-02-02 13:45:48,692 | INFO     | [data] copytool_out thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:52,350 | INFO     | [monitor] cgroup control has ended
[2026-02-02 08:45:58] 2026-02-02 13:45:52,601 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 08:45:58] 2026-02-02 13:45:53,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440192657216)>', '<ExcThread(monitor, started 140439214597888)>']
[2026-02-02 08:45:58] 2026-02-02 13:45:54,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 08:45:58] 2026-02-02 13:45:54,080 | INFO     | [monitor] control thread has ended
[2026-02-02 08:45:58] 2026-02-02 13:45:58,636 | INFO     | all workflow threads have been joined
[2026-02-02 08:45:58] 2026-02-02 13:45:58,636 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 08:45:58] 2026-02-02 13:45:58,636 | INFO     | traces error code: 0
[2026-02-02 08:45:58] 2026-02-02 13:45:58,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 08:45:58] 2026-02-02 13:45:58,756 [wrapper] ==== pilot stdout END ====
[2026-02-02 08:45:58] 2026-02-02 13:45:58,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 08:45:59] 2026-02-02 13:45:58,765 [wrapper] pilotpid: 873
[2026-02-02 08:45:59] 2026-02-02 13:45:58,770 [wrapper] Pilot exit status: 0
[2026-02-02 08:45:59] 2026-02-02 13:45:58,789 [wrapper] pandaids: 6996583995
[2026-02-02 08:45:59] 2026-02-02 13:45:58,831 [wrapper] cleanup supervisor_pilot 17910 874
[2026-02-02 08:45:59] 2026-02-02 13:45:58,836 [wrapper] Test setup, not cleaning
[2026-02-02 08:45:59] 2026-02-02 13:45:58,842 [wrapper] apfmon messages muted
[2026-02-02 08:45:59] 2026-02-02 13:45:58,846 [wrapper] ==== wrapper stdout END ====
[2026-02-02 08:45:59] 2026-02-02 13:45:58,850 [wrapper] ==== wrapper stderr END ====
[2026-02-02 08:45:59]  *** Error codes and diagnostics ***
[2026-02-02 08:45:59]     "exeErrorCode": 0,
[2026-02-02 08:45:59]     "exeErrorDiag": "",
[2026-02-02 08:45:59]     "pilotErrorCode": 0,
[2026-02-02 08:45:59]     "pilotErrorDiag": "",
[2026-02-02 08:45:59]  *** Listing of results directory ***
[2026-02-02 08:45:59] total 675144
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas    584422 Feb  2 00:08 pilot3.tar.gz
[2026-02-02 08:45:59] -rwx------ 1 boincer umatlas     36322 Feb  2 00:10 runpilot2-wrapper.sh
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas      5111 Feb  2 00:12 queuedata.json
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas       100 Feb  2 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 08:45:59] -rwxr-xr-x 1 boincer umatlas      7986 Feb  2 06:39 run_atlas
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas       105 Feb  2 06:39 job.xml
[2026-02-02 08:45:59] -rw-r--r-- 2 boincer umatlas 505479002 Feb  2 06:39 EVNT.48317929._000230.pool.root.1
[2026-02-02 08:45:59] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 06:39 start_atlas.sh
[2026-02-02 08:45:59] drwxrwx--x 2 boincer umatlas      4096 Feb  2 06:39 shared
[2026-02-02 08:45:59] -rw-r--r-- 2 boincer umatlas    597759 Feb  2 06:39 input.tar.gz
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas         0 Feb  2 06:39 boinc_lockfile
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas      2512 Feb  2 06:39 pandaJob.out
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas        57 Feb  2 06:39 setup.sh.local
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas   1008351 Feb  2 06:39 agis_schedconf.cvmfs.json
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas   1511668 Feb  2 06:39 agis_ddmendpoints.agis.ALL.json
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas       433 Feb  2 06:39 workernode_map.json
[2026-02-02 08:45:59] drwx------ 5 boincer umatlas      4096 Feb  2 06:39 pilot3
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas      5909 Feb  2 08:40 init_data.xml
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas 179075020 Feb  2 08:45 HITS.48317931._012760.pool.root.1
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas        95 Feb  2 08:45 pilot_heartbeat.json
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas       530 Feb  2 08:45 boinc_task_state.xml
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas      1049 Feb  2 08:45 memory_monitor_summary.json
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas      8192 Feb  2 08:45 boinc_mmap_file
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas        27 Feb  2 08:45 wrapper_checkpoint.txt
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas    359580 Feb  2 08:45 log.48317931._012760.job.log.tgz.1
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas      6407 Feb  2 08:45 heartbeat.json
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas      4550 Feb  2 08:45 pilotlog.txt
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas   1066675 Feb  2 08:45 log.48317931._012760.job.log.1
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas       357 Feb  2 08:45 output.list
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas       620 Feb  2 08:45 runtime_log
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas   1443840 Feb  2 08:45 result.tar.gz
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas      9341 Feb  2 08:45 runtime_log.err
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas       658 Feb  2 08:45 5K0NDmpN168nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmP3RKDmTK3Nem.diag
[2026-02-02 08:45:59] -rw-r--r-- 1 boincer umatlas     21190 Feb  2 08:45 stderr.txt
[2026-02-02 08:45:59] HITS file was successfully produced:
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas 179075020 Feb  2 08:45 shared/HITS.pool.root.1
[2026-02-02 08:45:59]  *** Contents of shared directory: ***
[2026-02-02 08:45:59] total 670528
[2026-02-02 08:45:59] -rw-r--r-- 2 boincer umatlas 505479002 Feb  2 06:39 ATLAS.root_0
[2026-02-02 08:45:59] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 06:39 start_atlas.sh
[2026-02-02 08:45:59] -rw-r--r-- 2 boincer umatlas    597759 Feb  2 06:39 input.tar.gz
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas 179075020 Feb  2 08:45 HITS.pool.root.1
[2026-02-02 08:45:59] -rw------- 1 boincer umatlas   1443840 Feb  2 08:45 result.tar.gz
08:46:00 (29658): run_atlas exited; CPU time 56047.254746
08:46:00 (29658): called boinc_finish(0)

</stderr_txt>
]]>

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