Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:57:08 (4100052): wrapper (7.7.26015): starting
12:57:08 (4100052): wrapper: running run_atlas (--nthreads 3)
[2026-02-02 12:57:08] Arguments: --nthreads 3
[2026-02-02 12:57:08] Threads: 3
[2026-02-02 12:57:08] Checking for CVMFS
[2026-02-02 12:57:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 12:57:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 12:57:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 12:57:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 12:57:09] 2.9.2.0 2988217 6931 83880 155785 2 50 14297090 36864001 0 130560 0 3160204 99.986 224875 17239 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 12:57:09] CVMFS is ok
[2026-02-02 12:57:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 12:57:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 12:57:09] Further information can be found at the LHC@home message board.
[2026-02-02 12:57:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 12:57:09] Checking for apptainer binary...
[2026-02-02 12:57:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 12:57:09] Running /usr/bin/apptainer --version
[2026-02-02 12:57:09] apptainer version 1.4.1-1.1
[2026-02-02 12:57:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 12:57:09] thA330a
[2026-02-02 12:57:09] apptainer works
[2026-02-02 12:57:09] Set ATHENA_PROC_NUMBER=3
[2026-02-02 12:57:09] Set ATHENA_CORE_NUMBER=3
[2026-02-02 12:57:09] Starting ATLAS job with PandaID=6981242552
[2026-02-02 12:57:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 14:13:28]  *** The last 200 lines of the pilot log: ***
[2026-02-02 14:13:28] 2026-02-02 13:12:40,942 | INFO     | aborting loop
[2026-02-02 14:13:28] 2026-02-02 13:12:41,212 | INFO     | all job control threads have been joined
[2026-02-02 14:13:28] 2026-02-02 13:12:41,413 | INFO     | all payload control threads have been joined
[2026-02-02 14:13:28] 2026-02-02 13:12:41,479 | INFO     | [job] retrieve thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:41,479 | INFO     | [job] queue monitor thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:41,640 | INFO     | [payload] failed_post thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:41,715 | INFO     | [data] control thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:41,947 | INFO     | [job] job monitor thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,218 | INFO     | [job] control thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,331 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,419 | INFO     | [payload] control thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,479 | INFO     | [data] copytool_out thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,660 | INFO     | [payload] validate_post thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,741 | INFO     | [job] validate thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,741 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,853 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:42,965 | INFO     | [data] copytool_in thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:43,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 14:13:28] 2026-02-02 13:12:47,476 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:12:50,717 | INFO     | job.realtimelogging is not enabled
[2026-02-02 14:13:28] 2026-02-02 13:12:51,723 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 14:13:28] 2026-02-02 13:13:10,673 | INFO     | PID=4104090 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 14:13:28] 2026-02-02 13:13:10,673 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 14:13:28] 2026-02-02 13:13:10,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 14:13:28] 2026-02-02 13:13:10,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 14:13:28] 2026-02-02 13:13:23,015 | INFO     | [monitor] cgroup control has ended
[2026-02-02 14:13:28] 2026-02-02 13:13:23,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157688072000)>', '<ExcThread(monitor, started 140156895999744)>']
[2026-02-02 14:13:28] 2026-02-02 13:13:23,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 14:13:28] 2026-02-02 13:13:23,733 | INFO     | [monitor] control thread has ended
[2026-02-02 14:13:28] 2026-02-02 13:13:28,125 | INFO     | all workflow threads have been joined
[2026-02-02 14:13:28] 2026-02-02 13:13:28,126 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 14:13:28] 2026-02-02 13:13:28,127 | INFO     | traces error code: 0
[2026-02-02 14:13:28] 2026-02-02 13:13:28,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 14:13:28] 2026-02-02 13:13:28,177 [wrapper] ==== pilot stdout END ====
[2026-02-02 14:13:28] 2026-02-02 13:13:28,179 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 14:13:28] 2026-02-02 13:13:28,182 [wrapper] pilotpid: 4104090
[2026-02-02 14:13:28] 2026-02-02 13:13:28,184 [wrapper] Pilot exit status: 0
[2026-02-02 14:13:28] 2026-02-02 13:13:28,191 [wrapper] pandaids: 6981242552
[2026-02-02 14:13:28] 2026-02-02 13:13:28,208 [wrapper] cleanup supervisor_pilot 4113835 4104091
[2026-02-02 14:13:28] 2026-02-02 13:13:28,210 [wrapper] Test setup, not cleaning
[2026-02-02 14:13:28] 2026-02-02 13:13:28,212 [wrapper] apfmon messages muted
[2026-02-02 14:13:28] 2026-02-02 13:13:28,215 [wrapper] ==== wrapper stdout END ====
[2026-02-02 14:13:28] 2026-02-02 13:13:28,217 [wrapper] ==== wrapper stderr END ====
[2026-02-02 14:13:28]  *** Error codes and diagnostics ***
[2026-02-02 14:13:28]     "exeErrorCode": 0,
[2026-02-02 14:13:28]     "exeErrorDiag": "",
[2026-02-02 14:13:28]     "pilotErrorCode": 0,
[2026-02-02 14:13:28]     "pilotErrorDiag": "",
[2026-02-02 14:13:28]  *** Listing of results directory ***
[2026-02-02 14:13:28] total 667632
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc    584422 Jan 24 17:59 pilot3.tar.gz
[2026-02-02 14:13:28] -rwx------ 1 boinc boinc     36322 Jan 24 18:03 runpilot2-wrapper.sh
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc      5111 Jan 24 18:05 queuedata.json
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc       100 Feb  2 12:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 14:13:28] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 12:57 run_atlas
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc       105 Feb  2 12:57 job.xml
[2026-02-02 14:13:28] -rw-r--r-- 2 boinc boinc 493306120 Feb  2 12:57 EVNT.48310824._000038.pool.root.1
[2026-02-02 14:13:28] -rw-r--r-- 2 boinc boinc    597756 Feb  2 12:57 input.tar.gz
[2026-02-02 14:13:28] drwxrwx--x 2 boinc boinc      4096 Feb  2 12:57 shared
[2026-02-02 14:13:28] -rw-r--r-- 2 boinc boinc     15845 Feb  2 12:57 start_atlas.sh
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc         0 Feb  2 12:57 boinc_setup_complete
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc      6440 Feb  2 12:57 init_data.xml
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc         0 Feb  2 12:57 boinc_lockfile
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc      2522 Feb  2 12:57 pandaJob.out
[2026-02-02 14:13:28] -rw------- 1 boinc boinc   1008351 Feb  2 12:57 agis_schedconf.cvmfs.json
[2026-02-02 14:13:28] -rw------- 1 boinc boinc   1511668 Feb  2 12:57 agis_ddmendpoints.agis.ALL.json
[2026-02-02 14:13:28] -rw------- 1 boinc boinc       428 Feb  2 12:57 workernode_map.json
[2026-02-02 14:13:28] drwx------ 5 boinc boinc      4096 Feb  2 12:57 pilot3
[2026-02-02 14:13:28] -rw------- 1 boinc boinc 184594676 Feb  2 14:12 HITS.48310826._005913.pool.root.1
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc       530 Feb  2 14:12 boinc_task_state.xml
[2026-02-02 14:13:28] -rw------- 1 boinc boinc      1017 Feb  2 14:12 memory_monitor_summary.json
[2026-02-02 14:13:28] -rw------- 1 boinc boinc    246967 Feb  2 14:12 log.48310826._005913.job.log.tgz.1
[2026-02-02 14:13:28] -rw------- 1 boinc boinc        95 Feb  2 14:12 pilot_heartbeat.json
[2026-02-02 14:13:28] -rw------- 1 boinc boinc      6306 Feb  2 14:12 heartbeat.json
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc        27 Feb  2 14:13 wrapper_checkpoint.txt
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc      8192 Feb  2 14:13 boinc_mmap_file
[2026-02-02 14:13:28] -rw------- 1 boinc boinc      4820 Feb  2 14:13 pilotlog.txt
[2026-02-02 14:13:28] -rw------- 1 boinc boinc    667292 Feb  2 14:13 log.48310826._005913.job.log.1
[2026-02-02 14:13:28] -rw------- 1 boinc boinc       357 Feb  2 14:13 output.list
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc       620 Feb  2 14:13 runtime_log
[2026-02-02 14:13:28] -rw------- 1 boinc boinc    931840 Feb  2 14:13 result.tar.gz
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc      8901 Feb  2 14:13 runtime_log.err
[2026-02-02 14:13:28] -rw------- 1 boinc boinc       658 Feb  2 14:13 qekLDmsDw38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE2yKDmY1WPhm.diag
[2026-02-02 14:13:28] -rw-r--r-- 1 boinc boinc      6805 Feb  2 14:13 stderr.txt
[2026-02-02 14:13:28] HITS file was successfully produced:
[2026-02-02 14:13:28] -rw------- 1 boinc boinc 184594676 Feb  2 14:12 shared/HITS.pool.root.1
[2026-02-02 14:13:28]  *** Contents of shared directory: ***
[2026-02-02 14:13:28] total 663536
[2026-02-02 14:13:28] -rw-r--r-- 2 boinc boinc 493306120 Feb  2 12:57 ATLAS.root_0
[2026-02-02 14:13:28] -rw-r--r-- 2 boinc boinc    597756 Feb  2 12:57 input.tar.gz
[2026-02-02 14:13:28] -rw-r--r-- 2 boinc boinc     15845 Feb  2 12:57 start_atlas.sh
[2026-02-02 14:13:28] -rw------- 1 boinc boinc 184594676 Feb  2 14:12 HITS.pool.root.1
[2026-02-02 14:13:28] -rw------- 1 boinc boinc    931840 Feb  2 14:13 result.tar.gz
14:13:30 (4100052): run_atlas exited; CPU time 12850.854665
14:13:30 (4100052): called boinc_finish(0)

</stderr_txt>
]]>

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