Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:13:20 (13772): wrapper (7.7.26015): starting
04:13:20 (13772): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 04:13:20] Arguments: --nthreads 12
[2026-02-02 04:13:20] Threads: 12
[2026-02-02 04:13:20] Checking for CVMFS
[2026-02-02 04:13:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 04:13:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 04:13:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 04:13:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 04:13:21] 2.11.2.0 3103 175382 103852 155780 2 50 15061963 20275201 1 130560 0 74692930 99.921 9316497 30563 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 04:13:21] CVMFS is ok
[2026-02-02 04:13:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 04:13:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 04:13:21] Further information can be found at the LHC@home message board.
[2026-02-02 04:13:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 04:13:21] Checking for apptainer binary...
[2026-02-02 04:13:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 04:13:21] Running /usr/bin/apptainer --version
[2026-02-02 04:13:21] apptainer version 1.3.2-1.el7
[2026-02-02 04:13:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 04:13:22] c-115-41.aglt2.org
[2026-02-02 04:13:22] apptainer works
[2026-02-02 04:13:22] Set ATHENA_PROC_NUMBER=12
[2026-02-02 04:13:22] Set ATHENA_CORE_NUMBER=12
[2026-02-02 04:13:22] Starting ATLAS job with PandaID=6993186431
[2026-02-02 04:13:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 05:18:54]  *** The last 200 lines of the pilot log: ***
[2026-02-02 05:18:54]  lfn=log.48442031._000787.job.log.tgz.1
[2026-02-02 05:18:54]  mtime=0
[2026-02-02 05:18:54]  protocol_id=None
[2026-02-02 05:18:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 05:18:54]  replicas=None
[2026-02-02 05:18:54]  scope=mc23_13p6TeV
[2026-02-02 05:18:54]  status=None
[2026-02-02 05:18:54]  status_code=0
[2026-02-02 05:18:54]  storage_token=
[2026-02-02 05:18:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6993186431/log.48442031._000787.job.log.tgz.1
[2026-02-02 05:18:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/7d/log.48442031._000787.job.log.tgz.1
[2026-02-02 05:18:54]  workdir=None
[2026-02-02 05:18:54] ]
[2026-02-02 05:18:54] 2026-02-02 10:17:57,231 | INFO     | transferring file log.48442031._000787.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6993186431/log.48442031._000787.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-02 05:18:54] 2026-02-02 10:17:57,231 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6993186431/log.48442031._000787.job.log.tgz.1 /tmp/boinchome/slots/0/log.48442031._000787.job
[2026-02-02 05:18:54] 2026-02-02 10:17:57,254 | INFO     | adding to output.list: log.48442031._000787.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/7d/log.48442031._000787.job.log.tg
[2026-02-02 05:18:54] 2026-02-02 10:17:57,255 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 05:18:54] 2026-02-02 10:17:57,255 | INFO     | summary of transferred files:
[2026-02-02 05:18:54] 2026-02-02 10:17:57,255 | INFO     |  -- lfn=log.48442031._000787.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 05:18:54] 2026-02-02 10:17:57,256 | INFO     | stage-out finished correctly
[2026-02-02 05:18:54] 2026-02-02 10:17:58,638 | INFO     | time since job start (3856s) is within the limit (349056.0s)
[2026-02-02 05:18:54] 2026-02-02 10:17:58,649 | INFO     | monitor loop #295: job 0:6993186431 is in state 'finished'
[2026-02-02 05:18:54] 2026-02-02 10:17:58,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 05:18:54] 2026-02-02 10:17:59,750 | INFO     | PID=17740 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 05:18:54] 2026-02-02 10:18:00,751 | INFO     | time since job start (3858s) is within the limit (349056.0s)
[2026-02-02 05:18:54] 2026-02-02 10:18:00,780 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 05:18:54] 2026-02-02 10:18:01,153 | INFO     | monitor loop #296: job 0:6993186431 is in state 'finished'
[2026-02-02 05:18:54] 2026-02-02 10:18:01,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 05:18:54] 2026-02-02 10:18:02,756 | INFO     | time since job start (3860s) is within the limit (349056.0s)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,656 | INFO     | monitor loop #297: job 0:6993186431 is in state 'finished'
[2026-02-02 05:18:54] 2026-02-02 10:18:03,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,802 | INFO     | job 6993186431 has state=finished
[2026-02-02 05:18:54] 2026-02-02 10:18:03,802 | INFO     | preparing for final server update for job 6993186431 in state='finished'
[2026-02-02 05:18:54] 2026-02-02 10:18:03,803 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6993186431/jobReport.json
[2026-02-02 05:18:54] 2026-02-02 10:18:03,807 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-02 05:18:54] 2026-02-02 10:18:03,807 | INFO     | this job has now completed (state=finished)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,807 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,807 | INFO     | log transfer has been attempted: DONE
[2026-02-02 05:18:54] 2026-02-02 10:18:03,808 | INFO     | job 6993186431 has finished - writing final server update
[2026-02-02 05:18:54] 2026-02-02 10:18:03,808 | INFO     | total number of processed events: 400 (read)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,810 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6993186431/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,810 | INFO     | extracted standard info from prmon json
[2026-02-02 05:18:54] 2026-02-02 10:18:03,811 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 05:18:54] 2026-02-02 10:18:03,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 05:18:54] 2026-02-02 10:18:03,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 05:18:54] 2026-02-02 10:18:03,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 05:18:54] 2026-02-02 10:18:03,812 | INFO     | fitting pss+swap vs Time
[2026-02-02 05:18:54] 2026-02-02 10:18:03,812 | INFO     | sum of square deviations: 54438230.0
[2026-02-02 05:18:54] 2026-02-02 10:18:03,813 | INFO     | sum of deviations: 1194437370.4999998
[2026-02-02 05:18:54] 2026-02-02 10:18:03,813 | INFO     | mean x: 1770025628.5
[2026-02-02 05:18:54] 2026-02-02 10:18:03,813 | INFO     | mean y: 2774361.4464285714
[2026-02-02 05:18:54] 2026-02-02 10:18:03,813 | INFO     | intersect: -38833623468.224915
[2026-02-02 05:18:54] 2026-02-02 10:18:03,813 | INFO     | chi2: 0.0024071640324366253
[2026-02-02 05:18:54] 2026-02-02 10:18:03,813 | INFO     | current memory leak: 21.94 B/s (using 56 data points, chi2=0.00)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,813 | INFO     | could have reported an average CPU frequency of 1729 MHz (6 samples)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | ..............................
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | . Timing measurements:
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | . get job = 0 s
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | . initial setup = 7 s
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | . payload setup = 6 s
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | . stage-in = 0 s
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | . payload execution = 3830 s
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | . stage-out = 0 s
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | . log creation = 0 s
[2026-02-02 05:18:54] 2026-02-02 10:18:03,814 | INFO     | ..............................
[2026-02-02 05:18:54] 2026-02-02 10:18:03,885 | INFO     | 
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | job summary report
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | --------------------------------------------------
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | PanDA job id: 6993186431
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | task id: 48442031
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | errors: (none)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | pilot state: finished 
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | transexitcode: 0
[2026-02-02 05:18:54] 2026-02-02 10:18:03,886 | INFO     | exeerrorcode: 0
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | exeerrordiag: 
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | exitcode: 0
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | exitmsg: OK
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | cpuconsumptiontime: 41295 s
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | nevents: 400
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | neventsw: 0
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | pid: 22203
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | pgrp: 22203
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | corecount: 12
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | event service: False
[2026-02-02 05:18:54] 2026-02-02 10:18:03,887 | INFO     | sizes: {0: 2277841, 1: 2278302, 11: 2278302, 3841: 2304054, 3842: 2304053, 3844: 2313107, 3847: 2313291, 3850: 2313485}
[2026-02-02 05:18:54] 2026-02-02 10:18:03,888 | INFO     | --------------------------------------------------
[2026-02-02 05:18:54] 2026-02-02 10:18:03,888 | INFO     | 
[2026-02-02 05:18:54] 2026-02-02 10:18:03,888 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 05:18:54] 2026-02-02 10:18:03,912 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,912 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,912 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,912 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,915 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,915 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 05:18:54] 2026-02-02 10:18:03,915 | INFO     | job 6993186431 has completed (purged errors)
[2026-02-02 05:18:54] 2026-02-02 10:18:03,916 | INFO     | overall cleanup function is called
[2026-02-02 05:18:54] 2026-02-02 10:18:04,924 | INFO     | --- collectZombieJob: --- 10, [22203]
[2026-02-02 05:18:54] 2026-02-02 10:18:04,924 | INFO     | zombie collector waiting for pid 22203
[2026-02-02 05:18:54] 2026-02-02 10:18:04,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 05:18:54] 2026-02-02 10:18:04,925 | INFO     | collected zombie processes
[2026-02-02 05:18:54] 2026-02-02 10:18:04,925 | INFO     | will attempt to kill all subprocesses of pid=22203
[2026-02-02 05:18:54] 2026-02-02 10:18:05,010 | INFO     | process IDs to be killed: [22203] (in reverse order)
[2026-02-02 05:18:54] 2026-02-02 10:18:05,064 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 05:18:54] 2026-02-02 10:18:05,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 05:18:54] 2026-02-02 10:18:05,069 | INFO     | did not find any defunct processes belonging to 22203
[2026-02-02 05:18:54] 2026-02-02 10:18:05,071 | INFO     | did not find any defunct processes belonging to 22203
[2026-02-02 05:18:54] 2026-02-02 10:18:05,071 | INFO     | ready for new job
[2026-02-02 05:18:54] 2026-02-02 10:18:05,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 05:18:54] 2026-02-02 10:18:05,072 | INFO     | **************************************
[2026-02-02 05:18:54] 2026-02-02 10:18:05,072 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 05:18:54] 2026-02-02 10:18:05,072 | INFO     | **************************************
[2026-02-02 05:18:54] 2026-02-02 10:18:05,072 | INFO     | 
[2026-02-02 05:18:54] 2026-02-02 10:18:05,073 | INFO     | architecture information:
[2026-02-02 05:18:54] 2026-02-02 10:18:05,073 | INFO     | executing command: cat /etc/os-release
[2026-02-02 05:18:54] 2026-02-02 10:18:05,091 | INFO     | cat /etc/os-release:
[2026-02-02 05:18:54] NAME="CentOS Linux"
[2026-02-02 05:18:54] VERSION="7 (Core)"
[2026-02-02 05:18:54] ID="centos"
[2026-02-02 05:18:54] ID_LIKE="rhel fedora"
[2026-02-02 05:18:54] VERSION_ID="7"
[2026-02-02 05:18:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 05:18:54] ANSI_COLOR="0;31"
[2026-02-02 05:18:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 05:18:54] HOME_URL="https://www.centos.org/"
[2026-02-02 05:18:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 05:18:54] 
[2026-02-02 05:18:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 05:18:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 05:18:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 05:18:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 05:18:54] 
[2026-02-02 05:18:54] 2026-02-02 10:18:05,091 | INFO     | **************************************
[2026-02-02 05:18:54] 2026-02-02 10:18:05,594 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 05:18:54] 2026-02-02 10:18:05,638 | INFO     | sufficient remaining disk space (18005098496 B)
[2026-02-02 05:18:54] 2026-02-02 10:18:05,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 05:18:54] 2026-02-02 10:18:05,638 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 05:18:54] 2026-02-02 10:18:05,638 | INFO     | update_server=False
[2026-02-02 05:18:54] 2026-02-02 10:18:05,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 05:18:54] 2026-02-02 10:18:05,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:18:54] 2026-02-02 10:18:05,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 05:18:54] 2026-02-02 10:18:05,639 | INFO     | aborting loop
[2026-02-02 05:18:54] 2026-02-02 10:18:05,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:18:54] 2026-02-02 10:18:06,438 | INFO     | all payload control threads have been joined
[2026-02-02 05:18:54] 2026-02-02 10:18:06,482 | INFO     | all job control threads have been joined
[2026-02-02 05:18:54] 2026-02-02 10:18:06,588 | INFO     | all data control threads have been joined
[2026-02-02 05:18:54] 2026-02-02 10:18:06,640 | INFO     | [job] job monitor thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:06,643 | INFO     | [job] queue monitor thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:06,644 | INFO     | [job] retrieve thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:06,690 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:06,788 | INFO     | [data] copytool_in thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:06,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 05:18:54] 2026-02-02 10:18:07,354 | INFO     | [payload] failed_post thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:07,443 | INFO     | [payload] control thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:07,451 | INFO     | [payload] validate_post thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:07,486 | INFO     | [job] control thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:07,583 | INFO     | [job] validate thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:07,593 | INFO     | [data] control thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:07,645 | INFO     | [data] copytool_out thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:07,902 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:07,902 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:10,866 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:15,820 | INFO     | job.realtimelogging is not enabled
[2026-02-02 05:18:54] 2026-02-02 10:18:16,825 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 05:18:54] 2026-02-02 10:18:35,961 | INFO     | PID=17740 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 05:18:54] 2026-02-02 10:18:35,971 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 05:18:54] 2026-02-02 10:18:35,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 05:18:54] 2026-02-02 10:18:35,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 05:18:54] 2026-02-02 10:18:48,568 | INFO     | [monitor] cgroup control has ended
[2026-02-02 05:18:54] 2026-02-02 10:18:48,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083377555264)>', '<ExcThread(monitor, started 140082933638912)>']
[2026-02-02 05:18:54] 2026-02-02 10:18:49,038 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 05:18:54] 2026-02-02 10:18:49,038 | INFO     | [monitor] control thread has ended
[2026-02-02 05:18:54] 2026-02-02 10:18:53,970 | INFO     | all workflow threads have been joined
[2026-02-02 05:18:54] 2026-02-02 10:18:53,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 05:18:54] 2026-02-02 10:18:53,980 | INFO     | traces error code: 0
[2026-02-02 05:18:54] 2026-02-02 10:18:53,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 05:18:54] 2026-02-02 10:18:54,085 [wrapper] ==== pilot stdout END ====
[2026-02-02 05:18:54] 2026-02-02 10:18:54,088 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 05:18:54] 2026-02-02 10:18:54,092 [wrapper] pilotpid: 17740
[2026-02-02 05:18:54] 2026-02-02 10:18:54,096 [wrapper] Pilot exit status: 0
[2026-02-02 05:18:54] 2026-02-02 10:18:54,111 [wrapper] pandaids: 6993186431
[2026-02-02 05:18:54] 2026-02-02 10:18:54,158 [wrapper] cleanup supervisor_pilot 13917 17741
[2026-02-02 05:18:54] 2026-02-02 10:18:54,162 [wrapper] Test setup, not cleaning
[2026-02-02 05:18:54] 2026-02-02 10:18:54,166 [wrapper] apfmon messages muted
[2026-02-02 05:18:54] 2026-02-02 10:18:54,169 [wrapper] ==== wrapper stdout END ====
[2026-02-02 05:18:54] 2026-02-02 10:18:54,173 [wrapper] ==== wrapper stderr END ====
[2026-02-02 05:18:54]  *** Error codes and diagnostics ***
[2026-02-02 05:18:54]     "exeErrorCode": 0,
[2026-02-02 05:18:54]     "exeErrorDiag": "",
[2026-02-02 05:18:54]     "pilotErrorCode": 0,
[2026-02-02 05:18:54]     "pilotErrorDiag": "",
[2026-02-02 05:18:54]  *** Listing of results directory ***
[2026-02-02 05:18:54] total 677944
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas    584422 Feb  1 22:02 pilot3.tar.gz
[2026-02-02 05:18:54] -rwx------ 1 boincer umatlas     36322 Feb  1 22:06 runpilot2-wrapper.sh
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas      5111 Feb  1 22:10 queuedata.json
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas       100 Feb  2 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 05:18:54] -rwxr-xr-x 1 boincer umatlas      7986 Feb  2 04:13 run_atlas
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas       105 Feb  2 04:13 job.xml
[2026-02-02 05:18:54] -rw-r--r-- 2 boincer umatlas 504282813 Feb  2 04:13 EVNT.48442027._000016.pool.root.1
[2026-02-02 05:18:54] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 04:13 start_atlas.sh
[2026-02-02 05:18:54] drwxrwx--x 2 boincer umatlas      4096 Feb  2 04:13 shared
[2026-02-02 05:18:54] -rw-r--r-- 2 boincer umatlas    597759 Feb  2 04:13 input.tar.gz
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas         0 Feb  2 04:13 boinc_lockfile
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas      2527 Feb  2 04:13 pandaJob.out
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas        57 Feb  2 04:13 setup.sh.local
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas   1008375 Feb  2 04:13 agis_schedconf.cvmfs.json
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas   1511668 Feb  2 04:13 agis_ddmendpoints.agis.ALL.json
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas       445 Feb  2 04:13 workernode_map.json
[2026-02-02 05:18:54] drwx------ 5 boincer umatlas      4096 Feb  2 04:13 pilot3
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas      5954 Feb  2 05:09 init_data.xml
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas 184036885 Feb  2 05:17 HITS.48442031._000787.pool.root.1
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas       530 Feb  2 05:17 boinc_task_state.xml
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas      1044 Feb  2 05:17 memory_monitor_summary.json
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas    404414 Feb  2 05:17 log.48442031._000787.job.log.tgz.1
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas      6409 Feb  2 05:18 heartbeat.json
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas      8192 Feb  2 05:18 boinc_mmap_file
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas        27 Feb  2 05:18 wrapper_checkpoint.txt
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas        95 Feb  2 05:18 pilot_heartbeat.json
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas      4814 Feb  2 05:18 pilotlog.txt
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas    570198 Feb  2 05:18 log.48442031._000787.job.log.1
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas       357 Feb  2 05:18 output.list
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas       620 Feb  2 05:18 runtime_log
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas    993280 Feb  2 05:18 result.tar.gz
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas      9343 Feb  2 05:18 runtime_log.err
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas       659 Feb  2 05:18 9oLODmzRz68n9Rq4apOajLDm4fhM0noT9bVooX4SDmPYRKDmm3r8Zm.diag
[2026-02-02 05:18:54] -rw-r--r-- 1 boincer umatlas     21779 Feb  2 05:18 stderr.txt
[2026-02-02 05:18:54] HITS file was successfully produced:
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas 184036885 Feb  2 05:17 shared/HITS.pool.root.1
[2026-02-02 05:18:54]  *** Contents of shared directory: ***
[2026-02-02 05:18:54] total 673768
[2026-02-02 05:18:54] -rw-r--r-- 2 boincer umatlas 504282813 Feb  2 04:13 ATLAS.root_0
[2026-02-02 05:18:54] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 04:13 start_atlas.sh
[2026-02-02 05:18:54] -rw-r--r-- 2 boincer umatlas    597759 Feb  2 04:13 input.tar.gz
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas 184036885 Feb  2 05:17 HITS.pool.root.1
[2026-02-02 05:18:54] -rw------- 1 boincer umatlas    993280 Feb  2 05:18 result.tar.gz
05:18:56 (13772): run_atlas exited; CPU time 41258.926061
05:18:56 (13772): called boinc_finish(0)

</stderr_txt>
]]>

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