Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:21:08 (801321): wrapper (7.7.26015): starting
05:21:08 (801321): wrapper: running run_atlas (--nthreads 2)
[2026-02-07 05:21:08] Arguments: --nthreads 2
[2026-02-07 05:21:08] Threads: 2
[2026-02-07 05:21:08] Checking for CVMFS
[2026-02-07 05:21:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 05:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 05:21:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 05:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 05:21:10] 2.13.3.0 278028 15618 97716 155971 0 49 5575323 10240000 0 130560 0 1673133 99.947 543864 77 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-02-07 05:21:10] CVMFS is ok
[2026-02-07 05:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 05:21:10] Checking for apptainer binary...
[2026-02-07 05:21:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 05:21:10] Running /usr/bin/apptainer --version
[2026-02-07 05:21:10] apptainer version 1.4.5-2.el9
[2026-02-07 05:21:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 05:21:10] ahanllin02
[2026-02-07 05:21:10] apptainer works
[2026-02-07 05:21:10] Set ATHENA_PROC_NUMBER=2
[2026-02-07 05:21:10] Set ATHENA_CORE_NUMBER=2
[2026-02-07 05:21:10] Starting ATLAS job with PandaID=6982378874
[2026-02-07 05:21:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 11:28:04]  *** The last 200 lines of the pilot log: ***
[2026-02-07 11:28:04] 2026-02-07 10:27:14,731 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 11:28:04] 2026-02-07 10:27:15,106 | INFO     | monitor loop #1662: job 0:6982378874 is in state 'finished'
[2026-02-07 11:28:04] 2026-02-07 10:27:15,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,229 | INFO     | job 6982378874 has state=finished
[2026-02-07 11:28:04] 2026-02-07 10:27:15,229 | INFO     | preparing for final server update for job 6982378874 in state='finished'
[2026-02-07 11:28:04] 2026-02-07 10:27:15,230 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-6982378874/jobReport.json
[2026-02-07 11:28:04] 2026-02-07 10:27:15,231 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-02-07 11:28:04] 2026-02-07 10:27:15,232 | INFO     | this job has now completed (state=finished)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,232 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,232 | INFO     | log transfer has been attempted: DONE
[2026-02-07 11:28:04] 2026-02-07 10:27:15,232 | INFO     | job 6982378874 has finished - writing final server update
[2026-02-07 11:28:04] 2026-02-07 10:27:15,232 | INFO     | total number of processed events: 400 (read)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,233 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6982378874/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,234 | INFO     | extracted standard info from prmon json
[2026-02-07 11:28:04] 2026-02-07 10:27:15,234 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 11:28:04] 2026-02-07 10:27:15,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 11:28:04] 2026-02-07 10:27:15,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 11:28:04] 2026-02-07 10:27:15,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 11:28:04] 2026-02-07 10:27:15,238 | INFO     | fitting pss+swap vs Time
[2026-02-07 11:28:04] 2026-02-07 10:27:15,239 | INFO     | sum of square deviations: 14467136370.0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,242 | INFO     | sum of deviations: -123615006872.5
[2026-02-07 11:28:04] 2026-02-07 10:27:15,242 | INFO     | mean x: 1770449052.5
[2026-02-07 11:28:04] 2026-02-07 10:27:15,242 | INFO     | mean y: 2329437.6694444446
[2026-02-07 11:28:04] 2026-02-07 10:27:15,242 | INFO     | intersect: 15129999917.504606
[2026-02-07 11:28:04] 2026-02-07 10:27:15,242 | INFO     | chi2: 1.7779676765005898
[2026-02-07 11:28:04] 2026-02-07 10:27:15,243 | INFO     | sum of square deviations: 13872669410.0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,245 | INFO     | sum of deviations: -121674545480.0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,245 | INFO     | mean x: 1770448900.0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,245 | INFO     | mean y: 2329935.6253521126
[2026-02-07 11:28:04] 2026-02-07 10:27:15,245 | INFO     | intersect: 15530600583.218473
[2026-02-07 11:28:04] 2026-02-07 10:27:15,246 | INFO     | chi2: 1.7729162593959586
[2026-02-07 11:28:04] 2026-02-07 10:27:15,246 | INFO     | current chi2=1.7729162593959586 (change=0.2841118638654576 %)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,246 | INFO     | right removable region: 354
[2026-02-07 11:28:04] 2026-02-07 10:27:15,246 | INFO     | sum of square deviations: 13872669410.0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,249 | INFO     | sum of deviations: -147865005951.00003
[2026-02-07 11:28:04] 2026-02-07 10:27:15,249 | INFO     | mean x: 1770449205.0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,249 | INFO     | mean y: 2335567.416901408
[2026-02-07 11:28:04] 2026-02-07 10:27:15,249 | INFO     | intersect: 18873071580.527752
[2026-02-07 11:28:04] 2026-02-07 10:27:15,249 | INFO     | chi2: 0.7163697943330573
[2026-02-07 11:28:04] 2026-02-07 10:27:15,250 | INFO     | current chi2=0.7163697943330573 (change=59.70850292717233 %)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,250 | INFO     | sum of square deviations: 13294714387.5
[2026-02-07 11:28:04] 2026-02-07 10:27:15,252 | INFO     | sum of deviations: -129563103117.0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,252 | INFO     | mean x: 1770449357.5
[2026-02-07 11:28:04] 2026-02-07 10:27:15,253 | INFO     | mean y: 2330737.022857143
[2026-02-07 11:28:04] 2026-02-07 10:27:15,253 | INFO     | intersect: 17256173578.872242
[2026-02-07 11:28:04] 2026-02-07 10:27:15,253 | INFO     | chi2: 0.675102396193336
[2026-02-07 11:28:04] 2026-02-07 10:27:15,253 | INFO     | current chi2=0.675102396193336 (change=5.760627886068442 %)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,253 | INFO     | left removable region: 20
[2026-02-07 11:28:04] 2026-02-07 10:27:15,253 | INFO     | sum of square deviations: 11553509647.5
[2026-02-07 11:28:04] 2026-02-07 10:27:15,256 | INFO     | sum of deviations: -89907836224.5
[2026-02-07 11:28:04] 2026-02-07 10:27:15,256 | INFO     | mean x: 1770449479.5
[2026-02-07 11:28:04] 2026-02-07 10:27:15,256 | INFO     | mean y: 2320736.278443114
[2026-02-07 11:28:04] 2026-02-07 10:27:15,256 | INFO     | intersect: 13779717103.544275
[2026-02-07 11:28:04] 2026-02-07 10:27:15,256 | INFO     | chi2: 0.555496782029633
[2026-02-07 11:28:04] 2026-02-07 10:27:15,257 | INFO     | current memory leak: -7.78 B/s (using 334 data points, chi2=0.56)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,257 | INFO     | could have reported an average CPU frequency of 2494 MHz (16 samples)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,257 | INFO     | ..............................
[2026-02-07 11:28:04] 2026-02-07 10:27:15,257 | INFO     | . Timing measurements:
[2026-02-07 11:28:04] 2026-02-07 10:27:15,257 | INFO     | . get job = 0 s
[2026-02-07 11:28:04] 2026-02-07 10:27:15,257 | INFO     | . initial setup = 4 s
[2026-02-07 11:28:04] 2026-02-07 10:27:15,257 | INFO     | . payload setup = 3 s
[2026-02-07 11:28:04] 2026-02-07 10:27:15,258 | INFO     | . stage-in = 0 s
[2026-02-07 11:28:04] 2026-02-07 10:27:15,258 | INFO     | . payload execution = 21926 s
[2026-02-07 11:28:04] 2026-02-07 10:27:15,258 | INFO     | . stage-out = 0 s
[2026-02-07 11:28:04] 2026-02-07 10:27:15,258 | INFO     | . log creation = 0 s
[2026-02-07 11:28:04] 2026-02-07 10:27:15,258 | INFO     | ..............................
[2026-02-07 11:28:04] 2026-02-07 10:27:15,322 | INFO     | 
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | job summary report
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | --------------------------------------------------
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | PanDA job id: 6982378874
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | task id: 48310724
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | errors: (none)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | pilot state: finished 
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | transexitcode: 0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,323 | INFO     | exeerrorcode: 0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | exeerrordiag: 
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | exitcode: 0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | exitmsg: OK
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | cpuconsumptiontime: 43329 s
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | nevents: 400
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | neventsw: 0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | pid: 809719
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | pgrp: 809719
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | corecount: 2
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | event service: False
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | sizes: {0: 2282665, 1: 2283126, 11: 2283126, 21933: 2317658, 21934: 2317685, 21936: 2326739, 21939: 2327117}
[2026-02-07 11:28:04] 2026-02-07 10:27:15,324 | INFO     | --------------------------------------------------
[2026-02-07 11:28:04] 2026-02-07 10:27:15,325 | INFO     | 
[2026-02-07 11:28:04] 2026-02-07 10:27:15,325 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-07 11:28:04] 2026-02-07 10:27:15,338 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,338 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,338 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,338 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,340 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,340 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 11:28:04] 2026-02-07 10:27:15,340 | INFO     | job 6982378874 has completed (purged errors)
[2026-02-07 11:28:04] 2026-02-07 10:27:15,340 | INFO     | overall cleanup function is called
[2026-02-07 11:28:04] 2026-02-07 10:27:16,344 | INFO     | --- collectZombieJob: --- 10, [809719]
[2026-02-07 11:28:04] 2026-02-07 10:27:16,344 | INFO     | zombie collector waiting for pid 809719
[2026-02-07 11:28:04] 2026-02-07 10:27:16,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 11:28:04] 2026-02-07 10:27:16,345 | INFO     | collected zombie processes
[2026-02-07 11:28:04] 2026-02-07 10:27:16,345 | INFO     | will attempt to kill all subprocesses of pid=809719
[2026-02-07 11:28:04] 2026-02-07 10:27:16,397 | INFO     | process IDs to be killed: [809719] (in reverse order)
[2026-02-07 11:28:04] 2026-02-07 10:27:16,421 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 11:28:04] 2026-02-07 10:27:16,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 11:28:04] 2026-02-07 10:27:16,423 | INFO     | did not find any defunct processes belonging to 809719
[2026-02-07 11:28:04] 2026-02-07 10:27:16,425 | INFO     | did not find any defunct processes belonging to 809719
[2026-02-07 11:28:04] 2026-02-07 10:27:16,425 | INFO     | ready for new job
[2026-02-07 11:28:04] 2026-02-07 10:27:16,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 11:28:04] 2026-02-07 10:27:16,427 | INFO     | **************************************
[2026-02-07 11:28:04] 2026-02-07 10:27:16,427 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-07 11:28:04] 2026-02-07 10:27:16,427 | INFO     | **************************************
[2026-02-07 11:28:04] 2026-02-07 10:27:16,427 | INFO     | 
[2026-02-07 11:28:04] 2026-02-07 10:27:16,427 | INFO     | architecture information:
[2026-02-07 11:28:04] 2026-02-07 10:27:16,428 | INFO     | executing command: cat /etc/os-release
[2026-02-07 11:28:04] 2026-02-07 10:27:16,436 | INFO     | cat /etc/os-release:
[2026-02-07 11:28:04] NAME="CentOS Linux"
[2026-02-07 11:28:04] VERSION="7 (Core)"
[2026-02-07 11:28:04] ID="centos"
[2026-02-07 11:28:04] ID_LIKE="rhel fedora"
[2026-02-07 11:28:04] VERSION_ID="7"
[2026-02-07 11:28:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 11:28:04] ANSI_COLOR="0;31"
[2026-02-07 11:28:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 11:28:04] HOME_URL="https://www.centos.org/"
[2026-02-07 11:28:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 11:28:04] 
[2026-02-07 11:28:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 11:28:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 11:28:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 11:28:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 11:28:04] 
[2026-02-07 11:28:04] 2026-02-07 10:27:16,437 | INFO     | **************************************
[2026-02-07 11:28:04] 2026-02-07 10:27:16,940 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-07 11:28:04] 2026-02-07 10:27:16,949 | INFO     | sufficient remaining disk space (463246196736 B)
[2026-02-07 11:28:04] 2026-02-07 10:27:16,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 11:28:04] 2026-02-07 10:27:16,950 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 11:28:04] 2026-02-07 10:27:16,950 | INFO     | update_server=False
[2026-02-07 11:28:04] 2026-02-07 10:27:16,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 11:28:04] 2026-02-07 10:27:16,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:28:04] 2026-02-07 10:27:16,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 11:28:04] 2026-02-07 10:27:16,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:28:04] 2026-02-07 10:27:16,950 | INFO     | aborting loop
[2026-02-07 11:28:04] 2026-02-07 10:27:17,065 | INFO     | all data control threads have been joined
[2026-02-07 11:28:04] 2026-02-07 10:27:17,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 11:28:04] 2026-02-07 10:27:17,955 | INFO     | [job] retrieve thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:17,956 | INFO     | [job] queue monitor thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:17,956 | INFO     | [job] job monitor thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:18,038 | INFO     | [data] copytool_in thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:18,071 | INFO     | [data] control thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:18,248 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:18,255 | INFO     | all payload control threads have been joined
[2026-02-07 11:28:04] 2026-02-07 10:27:18,383 | INFO     | all job control threads have been joined
[2026-02-07 11:28:04] 2026-02-07 10:27:18,754 | INFO     | [payload] failed_post thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:18,853 | INFO     | [job] validate thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:19,011 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:19,188 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:19,256 | INFO     | [payload] validate_post thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:19,261 | INFO     | [payload] control thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:19,283 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:19,388 | INFO     | [job] control thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:19,789 | INFO     | [data] copytool_out thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:20,957 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 11:28:04] 2026-02-07 10:27:47,323 | INFO     | PID=805342 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 11:28:04] 2026-02-07 10:27:47,324 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 11:28:04] 2026-02-07 10:27:47,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 11:28:04] 2026-02-07 10:27:47,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 11:28:04] 2026-02-07 10:27:58,548 | INFO     | [monitor] cgroup control has ended
[2026-02-07 11:28:04] 2026-02-07 10:27:58,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148171773760)>', '<ExcThread(monitor, started 140147735656192)>']
[2026-02-07 11:28:04] 2026-02-07 10:27:59,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 11:28:04] 2026-02-07 10:27:59,381 | INFO     | [monitor] control thread has ended
[2026-02-07 11:28:04] 2026-02-07 10:28:03,852 | INFO     | all workflow threads have been joined
[2026-02-07 11:28:04] 2026-02-07 10:28:03,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 11:28:04] 2026-02-07 10:28:03,853 | INFO     | traces error code: 0
[2026-02-07 11:28:04] 2026-02-07 10:28:03,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 11:28:04] 2026-02-07 10:28:03,936 [wrapper] ==== pilot stdout END ====
[2026-02-07 11:28:04] 2026-02-07 10:28:03,938 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 11:28:04] 2026-02-07 10:28:03,940 [wrapper] pilotpid: 805342
[2026-02-07 11:28:04] 2026-02-07 10:28:03,942 [wrapper] Pilot exit status: 0
[2026-02-07 11:28:04] 2026-02-07 10:28:03,950 [wrapper] pandaids: 6982378874
[2026-02-07 11:28:04] 2026-02-07 10:28:03,966 [wrapper] cleanup supervisor_pilot  815139 805343
[2026-02-07 11:28:04] 2026-02-07 10:28:03,968 [wrapper] Test setup, not cleaning
[2026-02-07 11:28:04] 2026-02-07 10:28:03,970 [wrapper] apfmon messages muted
[2026-02-07 11:28:04] 2026-02-07 10:28:03,972 [wrapper] ==== wrapper stdout END ====
[2026-02-07 11:28:04] 2026-02-07 10:28:03,974 [wrapper] ==== wrapper stderr END ====
[2026-02-07 11:28:04]  *** Error codes and diagnostics ***
[2026-02-07 11:28:04]     "exeErrorCode": 0,
[2026-02-07 11:28:04]     "exeErrorDiag": "",
[2026-02-07 11:28:04]     "pilotErrorCode": 0,
[2026-02-07 11:28:04]     "pilotErrorDiag": "",
[2026-02-07 11:28:04]  *** Listing of results directory ***
[2026-02-07 11:28:04] total 666208
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc    584422 Jan 25 05:03 pilot3.tar.gz
[2026-02-07 11:28:04] -rwx------ 1 boinc boinc     36322 Jan 25 05:49 runpilot2-wrapper.sh
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc      5111 Jan 25 05:49 queuedata.json
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc       100 Feb  7 05:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 11:28:04] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 05:21 run_atlas
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc       105 Feb  7 05:21 job.xml
[2026-02-07 11:28:04] -rw-r--r-- 2 boinc boinc 488838382 Feb  7 05:21 EVNT.48310721._000102.pool.root.1
[2026-02-07 11:28:04] -rw-r--r-- 2 boinc boinc     15845 Feb  7 05:21 start_atlas.sh
[2026-02-07 11:28:04] drwxrwx--x 2 boinc boinc        68 Feb  7 05:21 shared
[2026-02-07 11:28:04] -rw-r--r-- 2 boinc boinc    597759 Feb  7 05:21 input.tar.gz
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc      6512 Feb  7 05:21 init_data.xml
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc         0 Feb  7 05:21 boinc_setup_complete
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc         0 Feb  7 05:21 boinc_lockfile
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc      2533 Feb  7 05:21 pandaJob.out
[2026-02-07 11:28:04] -rw------- 1 boinc boinc        51 Feb  7 05:21 setup.sh.local
[2026-02-07 11:28:04] -rw------- 1 boinc boinc   1009504 Feb  7 05:21 agis_schedconf.cvmfs.json
[2026-02-07 11:28:04] -rw------- 1 boinc boinc       428 Feb  7 05:21 workernode_map.json
[2026-02-07 11:28:04] drwx------ 5 boinc boinc      4096 Feb  7 05:21 pilot3
[2026-02-07 11:28:04] -rw------- 1 boinc boinc 182426296 Feb  7 11:26 HITS.48310724._005057.pool.root.1
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc       531 Feb  7 11:26 boinc_task_state.xml
[2026-02-07 11:28:04] -rw------- 1 boinc boinc      1014 Feb  7 11:27 memory_monitor_summary.json
[2026-02-07 11:28:04] -rw------- 1 boinc boinc   1513088 Feb  7 11:27 agis_ddmendpoints.agis.ALL.json
[2026-02-07 11:28:04] -rw------- 1 boinc boinc    459605 Feb  7 11:27 log.48310724._005057.job.log.tgz.1
[2026-02-07 11:28:04] -rw------- 1 boinc boinc        95 Feb  7 11:27 pilot_heartbeat.json
[2026-02-07 11:28:04] -rw------- 1 boinc boinc      6313 Feb  7 11:27 heartbeat.json
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc      8192 Feb  7 11:27 boinc_mmap_file
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc        28 Feb  7 11:27 wrapper_checkpoint.txt
[2026-02-07 11:28:04] -rw------- 1 boinc boinc      4744 Feb  7 11:28 pilotlog.txt
[2026-02-07 11:28:04] -rw------- 1 boinc boinc   3037259 Feb  7 11:28 log.48310724._005057.job.log.1
[2026-02-07 11:28:04] -rw------- 1 boinc boinc       357 Feb  7 11:28 output.list
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc       620 Feb  7 11:28 runtime_log
[2026-02-07 11:28:04] -rw------- 1 boinc boinc   3512320 Feb  7 11:28 result.tar.gz
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc      9293 Feb  7 11:28 runtime_log.err
[2026-02-07 11:28:04] -rw------- 1 boinc boinc       653 Feb  7 11:28 IEUKDmHF738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHb6KDmd5dHEo.diag
[2026-02-07 11:28:04] -rw-r--r-- 1 boinc boinc     20984 Feb  7 11:28 stderr.txt
[2026-02-07 11:28:04] HITS file was successfully produced:
[2026-02-07 11:28:04] -rw------- 1 boinc boinc 182426296 Feb  7 11:26 shared/HITS.pool.root.1
[2026-02-07 11:28:04]  *** Contents of shared directory: ***
[2026-02-07 11:28:04] total 659572
[2026-02-07 11:28:04] -rw-r--r-- 2 boinc boinc 488838382 Feb  7 05:21 ATLAS.root_0
[2026-02-07 11:28:04] -rw-r--r-- 2 boinc boinc     15845 Feb  7 05:21 start_atlas.sh
[2026-02-07 11:28:04] -rw-r--r-- 2 boinc boinc    597759 Feb  7 05:21 input.tar.gz
[2026-02-07 11:28:04] -rw------- 1 boinc boinc 182426296 Feb  7 11:26 HITS.pool.root.1
[2026-02-07 11:28:04] -rw------- 1 boinc boinc   3512320 Feb  7 11:28 result.tar.gz
11:28:05 (801321): run_atlas exited; CPU time 43689.205114
11:28:05 (801321): called boinc_finish(0)

</stderr_txt>
]]>

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