Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:22:23 (1989087): wrapper (7.7.26015): starting
04:22:23 (1989087): wrapper: running run_atlas (--nthreads 9)
[2026-02-02 04:22:23] Arguments: --nthreads 9
[2026-02-02 04:22:23] Threads: 9
[2026-02-02 04:22:23] Checking for CVMFS
[2026-02-02 04:22:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 04:22:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 04:22:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 04:22:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 04:22:24] 2.13.3.0 388524 51273 101448 155781 2 50 29992434 32515073 0 16776704 0 22155463 99.980 1834980 35237 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 04:22:24] CVMFS is ok
[2026-02-02 04:22:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 04:22:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 04:22:24] Further information can be found at the LHC@home message board.
[2026-02-02 04:22:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 04:22:24] Checking for apptainer binary...
[2026-02-02 04:22:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 04:22:24] Running /usr/bin/apptainer --version
[2026-02-02 04:22:24] apptainer version 1.4.5-2.el9
[2026-02-02 04:22:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 04:22:24] c-205-38.aglt2.org
[2026-02-02 04:22:24] apptainer works
[2026-02-02 04:22:24] Set ATHENA_PROC_NUMBER=9
[2026-02-02 04:22:24] Set ATHENA_CORE_NUMBER=9
[2026-02-02 04:22:24] Starting ATLAS job with PandaID=6993185830
[2026-02-02 04:22:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 05:12:40]  *** The last 200 lines of the pilot log: ***
[2026-02-02 05:12:40]  guid=2a0aae22-9e86-443a-8121-9553476c8af4
[2026-02-02 05:12:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 05:12:40]  is_altstaged=None
[2026-02-02 05:12:40]  is_tar=False
[2026-02-02 05:12:40]  lfn=log.48318034._005006.job.log.tgz.1
[2026-02-02 05:12:40]  mtime=0
[2026-02-02 05:12:40]  protocol_id=None
[2026-02-02 05:12:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 05:12:40]  replicas=None
[2026-02-02 05:12:40]  scope=mc23_13p6TeV
[2026-02-02 05:12:40]  status=None
[2026-02-02 05:12:40]  status_code=0
[2026-02-02 05:12:40]  storage_token=
[2026-02-02 05:12:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6993185830/log.48318034._005006.job.log.tgz.1
[2026-02-02 05:12:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/5c/log.48318034._005006.job.log.tgz.1
[2026-02-02 05:12:40]  workdir=None
[2026-02-02 05:12:40] ]
[2026-02-02 05:12:40] 2026-02-02 10:11:54,329 | INFO     | transferring file log.48318034._005006.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6993185830/log.48318034._005006.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-02 05:12:40] 2026-02-02 10:11:54,329 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6993185830/log.48318034._005006.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318034._005006.job
[2026-02-02 05:12:40] 2026-02-02 10:11:54,337 | INFO     | adding to output.list: log.48318034._005006.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/5c/log.48318034._005006.job.log.tg
[2026-02-02 05:12:40] 2026-02-02 10:11:54,337 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 05:12:40] 2026-02-02 10:11:54,337 | INFO     | summary of transferred files:
[2026-02-02 05:12:40] 2026-02-02 10:11:54,337 | INFO     |  -- lfn=log.48318034._005006.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 05:12:40] 2026-02-02 10:11:54,337 | INFO     | stage-out finished correctly
[2026-02-02 05:12:40] 2026-02-02 10:11:55,514 | INFO     | time since job start (2963s) is within the limit (349056.0s)
[2026-02-02 05:12:40] 2026-02-02 10:11:56,525 | INFO     | monitor loop #230: job 0:6993185830 is in state 'finished'
[2026-02-02 05:12:40] 2026-02-02 10:11:56,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 05:12:40] 2026-02-02 10:11:57,163 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 05:12:40] 2026-02-02 10:11:57,519 | INFO     | time since job start (2965s) is within the limit (349056.0s)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,173 | INFO     | job 6993185830 has state=finished
[2026-02-02 05:12:40] 2026-02-02 10:11:58,173 | INFO     | preparing for final server update for job 6993185830 in state='finished'
[2026-02-02 05:12:40] 2026-02-02 10:11:58,219 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,219 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6993185830/jobReport.json
[2026-02-02 05:12:40] 2026-02-02 10:11:58,220 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-02 05:12:40] 2026-02-02 10:11:58,220 | INFO     | this job has now completed (state=finished)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,220 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,220 | INFO     | log transfer has been attempted: DONE
[2026-02-02 05:12:40] 2026-02-02 10:11:58,220 | INFO     | job 6993185830 has finished - writing final server update
[2026-02-02 05:12:40] 2026-02-02 10:11:58,220 | INFO     | total number of processed events: 400 (read)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,222 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6993185830/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,222 | INFO     | extracted standard info from prmon json
[2026-02-02 05:12:40] 2026-02-02 10:11:58,222 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 05:12:40] 2026-02-02 10:11:58,222 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 05:12:40] 2026-02-02 10:11:58,223 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 05:12:40] 2026-02-02 10:11:58,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 05:12:40] 2026-02-02 10:11:58,223 | INFO     | fitting pss+swap vs Time
[2026-02-02 05:12:40] 2026-02-02 10:11:58,223 | INFO     | sum of square deviations: 22960430.5
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | sum of deviations: 329184974.99999994
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | mean x: 1770025723.5
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | mean y: 3028455.9523809524
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | intersect: -25373929242.628414
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | chi2: 0.00011011306014387601
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | current memory leak: 14.34 B/s (using 42 data points, chi2=0.00)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | could have reported an average CPU frequency of 2660 MHz (5 samples)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | ..............................
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | . Timing measurements:
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | . get job = 0 s
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | . initial setup = 4 s
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | . payload setup = 2 s
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | . stage-in = 0 s
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | . payload execution = 2943 s
[2026-02-02 05:12:40] 2026-02-02 10:11:58,224 | INFO     | . stage-out = 0 s
[2026-02-02 05:12:40] 2026-02-02 10:11:58,225 | INFO     | . log creation = 0 s
[2026-02-02 05:12:40] 2026-02-02 10:11:58,225 | INFO     | ..............................
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | 
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | job summary report
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | --------------------------------------------------
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | PanDA job id: 6993185830
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | task id: 48318034
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | errors: (none)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | pilot state: finished 
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | transexitcode: 0
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | exeerrorcode: 0
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | exeerrordiag: 
[2026-02-02 05:12:40] 2026-02-02 10:11:58,301 | INFO     | exitcode: 0
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | exitmsg: OK
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | cpuconsumptiontime: 24615 s
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | nevents: 400
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | neventsw: 0
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | pid: 1997212
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | pgrp: 1997212
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | corecount: 9
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | event service: False
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | sizes: {0: 2278236, 11: 2278236, 2950: 2303693, 2951: 2312691, 2954: 2312747, 2955: 2312973}
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | --------------------------------------------------
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | 
[2026-02-02 05:12:40] 2026-02-02 10:11:58,302 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 05:12:40] 2026-02-02 10:11:58,310 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,310 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,310 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | job 6993185830 has completed (purged errors)
[2026-02-02 05:12:40] 2026-02-02 10:11:58,311 | INFO     | overall cleanup function is called
[2026-02-02 05:12:40] 2026-02-02 10:11:58,606 | INFO     | PID=1992782 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 05:12:40] 2026-02-02 10:11:59,318 | INFO     | --- collectZombieJob: --- 10, [1997212]
[2026-02-02 05:12:40] 2026-02-02 10:11:59,318 | INFO     | zombie collector waiting for pid 1997212
[2026-02-02 05:12:40] 2026-02-02 10:11:59,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 05:12:40] 2026-02-02 10:11:59,319 | INFO     | collected zombie processes
[2026-02-02 05:12:40] 2026-02-02 10:11:59,319 | INFO     | will attempt to kill all subprocesses of pid=1997212
[2026-02-02 05:12:40] 2026-02-02 10:11:59,378 | INFO     | process IDs to be killed: [1997212] (in reverse order)
[2026-02-02 05:12:40] 2026-02-02 10:11:59,398 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 05:12:40] 2026-02-02 10:11:59,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 05:12:40] 2026-02-02 10:11:59,399 | INFO     | did not find any defunct processes belonging to 1997212
[2026-02-02 05:12:40] 2026-02-02 10:11:59,401 | INFO     | did not find any defunct processes belonging to 1997212
[2026-02-02 05:12:40] 2026-02-02 10:11:59,401 | INFO     | ready for new job
[2026-02-02 05:12:40] 2026-02-02 10:11:59,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 05:12:40] 2026-02-02 10:11:59,402 | INFO     | **************************************
[2026-02-02 05:12:40] 2026-02-02 10:11:59,402 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 05:12:40] 2026-02-02 10:11:59,402 | INFO     | **************************************
[2026-02-02 05:12:40] 2026-02-02 10:11:59,402 | INFO     | 
[2026-02-02 05:12:40] 2026-02-02 10:11:59,402 | INFO     | architecture information:
[2026-02-02 05:12:40] 2026-02-02 10:11:59,402 | INFO     | executing command: cat /etc/os-release
[2026-02-02 05:12:40] 2026-02-02 10:11:59,408 | INFO     | cat /etc/os-release:
[2026-02-02 05:12:40] NAME="CentOS Linux"
[2026-02-02 05:12:40] VERSION="7 (Core)"
[2026-02-02 05:12:40] ID="centos"
[2026-02-02 05:12:40] ID_LIKE="rhel fedora"
[2026-02-02 05:12:40] VERSION_ID="7"
[2026-02-02 05:12:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 05:12:40] ANSI_COLOR="0;31"
[2026-02-02 05:12:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 05:12:40] HOME_URL="https://www.centos.org/"
[2026-02-02 05:12:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 05:12:40] 
[2026-02-02 05:12:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 05:12:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 05:12:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 05:12:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 05:12:40] 
[2026-02-02 05:12:40] 2026-02-02 10:11:59,408 | INFO     | **************************************
[2026-02-02 05:12:40] 2026-02-02 10:11:59,911 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 05:12:40] 2026-02-02 10:11:59,917 | INFO     | sufficient remaining disk space (20019412992 B)
[2026-02-02 05:12:40] 2026-02-02 10:11:59,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 05:12:40] 2026-02-02 10:11:59,917 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 05:12:40] 2026-02-02 10:11:59,917 | INFO     | update_server=False
[2026-02-02 05:12:40] 2026-02-02 10:11:59,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 05:12:40] 2026-02-02 10:11:59,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 05:12:40] 2026-02-02 10:11:59,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:12:40] 2026-02-02 10:12:00,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:12:40] 2026-02-02 10:12:00,034 | INFO     | aborting loop
[2026-02-02 05:12:40] 2026-02-02 10:12:00,354 | INFO     | all payload control threads have been joined
[2026-02-02 05:12:40] 2026-02-02 10:12:00,923 | INFO     | [job] retrieve thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:00,923 | INFO     | [job] queue monitor thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:00,951 | INFO     | all job control threads have been joined
[2026-02-02 05:12:40] 2026-02-02 10:12:00,976 | INFO     | all data control threads have been joined
[2026-02-02 05:12:40] 2026-02-02 10:12:01,039 | INFO     | [job] job monitor thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:01,182 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:01,183 | INFO     | [data] copytool_in thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:01,360 | INFO     | [payload] control thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:01,397 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:01,581 | INFO     | [payload] failed_post thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:01,923 | INFO     | [data] copytool_out thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:01,956 | INFO     | [job] control thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:01,981 | INFO     | [data] control thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:02,096 | INFO     | [payload] validate_post thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:02,352 | INFO     | [job] validate thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:02,408 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:03,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 05:12:40] 2026-02-02 10:12:07,212 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:10,917 | INFO     | job.realtimelogging is not enabled
[2026-02-02 05:12:40] 2026-02-02 10:12:11,922 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 05:12:40] 2026-02-02 10:12:30,749 | INFO     | PID=1992782 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 05:12:40] 2026-02-02 10:12:30,749 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 05:12:40] 2026-02-02 10:12:30,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 05:12:40] 2026-02-02 10:12:30,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 05:12:40] 2026-02-02 10:12:35,682 | INFO     | [monitor] cgroup control has ended
[2026-02-02 05:12:40] 2026-02-02 10:12:35,686 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733192611648)>', '<ExcThread(monitor, started 139732684084992)>']
[2026-02-02 05:12:40] 2026-02-02 10:12:35,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 05:12:40] 2026-02-02 10:12:35,774 | INFO     | [monitor] control thread has ended
[2026-02-02 05:12:40] 2026-02-02 10:12:40,712 | INFO     | all workflow threads have been joined
[2026-02-02 05:12:40] 2026-02-02 10:12:40,712 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 05:12:40] 2026-02-02 10:12:40,712 | INFO     | traces error code: 0
[2026-02-02 05:12:40] 2026-02-02 10:12:40,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 05:12:40] 2026-02-02 10:12:40,769 [wrapper] ==== pilot stdout END ====
[2026-02-02 05:12:40] 2026-02-02 10:12:40,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 05:12:40] 2026-02-02 10:12:40,772 [wrapper] pilotpid: 1992782
[2026-02-02 05:12:40] 2026-02-02 10:12:40,773 [wrapper] Pilot exit status: 0
[2026-02-02 05:12:40] 2026-02-02 10:12:40,778 [wrapper] pandaids: 6993185830
[2026-02-02 05:12:40] 2026-02-02 10:12:40,791 [wrapper] cleanup supervisor_pilot 2024575 1992783
[2026-02-02 05:12:40] 2026-02-02 10:12:40,793 [wrapper] Test setup, not cleaning
[2026-02-02 05:12:40] 2026-02-02 10:12:40,794 [wrapper] apfmon messages muted
[2026-02-02 05:12:40] 2026-02-02 10:12:40,795 [wrapper] ==== wrapper stdout END ====
[2026-02-02 05:12:40] 2026-02-02 10:12:40,797 [wrapper] ==== wrapper stderr END ====
[2026-02-02 05:12:40]  *** Error codes and diagnostics ***
[2026-02-02 05:12:40]     "exeErrorCode": 0,
[2026-02-02 05:12:40]     "exeErrorDiag": "",
[2026-02-02 05:12:40]     "pilotErrorCode": 0,
[2026-02-02 05:12:40]     "pilotErrorDiag": "",
[2026-02-02 05:12:40]  *** Listing of results directory ***
[2026-02-02 05:12:40] total 666140
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas    584422 Feb  1 22:02 pilot3.tar.gz
[2026-02-02 05:12:40] -rwx------. 1 boincer umatlas     36322 Feb  1 22:06 runpilot2-wrapper.sh
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas      5111 Feb  1 22:08 queuedata.json
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas       100 Feb  2 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 05:12:40] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 04:22 run_atlas
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas       105 Feb  2 04:22 job.xml
[2026-02-02 05:12:40] -rw-r--r--. 2 boincer umatlas 495366748 Feb  2 04:22 EVNT.48318032._000096.pool.root.1
[2026-02-02 05:12:40] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 04:22 start_atlas.sh
[2026-02-02 05:12:40] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 04:22 shared
[2026-02-02 05:12:40] -rw-r--r--. 2 boincer umatlas    597764 Feb  2 04:22 input.tar.gz
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas         0 Feb  2 04:22 boinc_lockfile
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas      2536 Feb  2 04:22 pandaJob.out
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas   1008375 Feb  2 04:22 agis_schedconf.cvmfs.json
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas   1511668 Feb  2 04:22 agis_ddmendpoints.agis.ALL.json
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas       440 Feb  2 04:22 workernode_map.json
[2026-02-02 05:12:40] drwx------. 5 boincer umatlas      4096 Feb  2 04:22 pilot3
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas 181237057 Feb  2 05:11 HITS.48318034._005006.pool.root.1
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas       530 Feb  2 05:11 boinc_task_state.xml
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas        95 Feb  2 05:11 pilot_heartbeat.json
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas      1028 Feb  2 05:11 memory_monitor_summary.json
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas    339567 Feb  2 05:11 log.48318034._005006.job.log.tgz.1
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas      6364 Feb  2 05:11 heartbeat.json
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas      6530 Feb  2 05:12 init_data.xml
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas        27 Feb  2 05:12 wrapper_checkpoint.txt
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 05:12 boinc_mmap_file
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas      4816 Feb  2 05:12 pilotlog.txt
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas    453891 Feb  2 05:12 log.48318034._005006.job.log.1
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas       357 Feb  2 05:12 output.list
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas       620 Feb  2 05:12 runtime_log
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas    808960 Feb  2 05:12 result.tar.gz
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas      8816 Feb  2 05:12 runtime_log.err
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas       648 Feb  2 05:12 pWkLDmbRz68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyrRKDmI1WdHn.diag
[2026-02-02 05:12:40] -rw-r--r--. 1 boincer umatlas     21481 Feb  2 05:12 stderr.txt
[2026-02-02 05:12:40] HITS file was successfully produced:
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas 181237057 Feb  2 05:11 shared/HITS.pool.root.1
[2026-02-02 05:12:40]  *** Contents of shared directory: ***
[2026-02-02 05:12:40] total 662148
[2026-02-02 05:12:40] -rw-r--r--. 2 boincer umatlas 495366748 Feb  2 04:22 ATLAS.root_0
[2026-02-02 05:12:40] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 04:22 start_atlas.sh
[2026-02-02 05:12:40] -rw-r--r--. 2 boincer umatlas    597764 Feb  2 04:22 input.tar.gz
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas 181237057 Feb  2 05:11 HITS.pool.root.1
[2026-02-02 05:12:40] -rw-------. 1 boincer umatlas    808960 Feb  2 05:12 result.tar.gz
05:12:42 (1989087): run_atlas exited; CPU time 24625.166040
05:12:42 (1989087): called boinc_finish(0)

</stderr_txt>
]]>

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