Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:35:29 (14773): wrapper (7.7.26015): starting
02:35:29 (14773): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 02:35:29] Arguments: --nthreads 8
[2026-02-02 02:35:29] Threads: 8
[2026-02-02 02:35:29] Checking for CVMFS
[2026-02-02 02:35:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 02:35:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 02:35:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 02:35:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 02:35:29] 2.11.2.0 2913 186817 85512 155779 2 49 18350981 20275200 1 130560 0 56547618 99.861 11782806 34613 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-02 02:35:29] CVMFS is ok
[2026-02-02 02:35:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 02:35:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 02:35:29] Further information can be found at the LHC@home message board.
[2026-02-02 02:35:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 02:35:29] Checking for apptainer binary...
[2026-02-02 02:35:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 02:35:29] Running /usr/bin/apptainer --version
[2026-02-02 02:35:29] apptainer version 1.3.2-1.el7
[2026-02-02 02:35:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 02:35:31] c-115-3.aglt2.org
[2026-02-02 02:35:31] apptainer works
[2026-02-02 02:35:31] Set ATHENA_PROC_NUMBER=8
[2026-02-02 02:35:31] Set ATHENA_CORE_NUMBER=8
[2026-02-02 02:35:31] Starting ATLAS job with PandaID=6993184666
[2026-02-02 02:35:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 05:32:16]  *** The last 200 lines of the pilot log: ***
[2026-02-02 05:32:16] 2026-02-02 10:31:37,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,582 | INFO     | log transfer has been attempted: DONE
[2026-02-02 05:32:16] 2026-02-02 10:31:37,582 | INFO     | job 6993184666 has finished - writing final server update
[2026-02-02 05:32:16] 2026-02-02 10:31:37,583 | INFO     | total number of processed events: 400 (read)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,584 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6993184666/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,584 | INFO     | extracted standard info from prmon json
[2026-02-02 05:32:16] 2026-02-02 10:31:37,584 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 05:32:16] 2026-02-02 10:31:37,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 05:32:16] 2026-02-02 10:31:37,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 05:32:16] 2026-02-02 10:31:37,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 05:32:16] 2026-02-02 10:31:37,588 | INFO     | fitting pss+swap vs Time
[2026-02-02 05:32:16] 2026-02-02 10:31:37,588 | INFO     | sum of square deviations: 1605470102.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,589 | INFO     | sum of deviations: -15877569890.999996
[2026-02-02 05:32:16] 2026-02-02 10:31:37,589 | INFO     | mean x: 1770023025.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,589 | INFO     | mean y: 2538568.9942196533
[2026-02-02 05:32:16] 2026-02-02 10:31:37,589 | INFO     | intersect: 17507482605.701504
[2026-02-02 05:32:16] 2026-02-02 10:31:37,589 | INFO     | chi2: 2.3168251792244146
[2026-02-02 05:32:16] 2026-02-02 10:31:37,590 | INFO     | sum of square deviations: 1470248962.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,591 | INFO     | sum of deviations: -3743497196.499996
[2026-02-02 05:32:16] 2026-02-02 10:31:37,591 | INFO     | mean x: 1770022872.5
[2026-02-02 05:32:16] 2026-02-02 10:31:37,591 | INFO     | mean y: 2551947.029761905
[2026-02-02 05:32:16] 2026-02-02 10:31:37,591 | INFO     | intersect: 4509323134.904691
[2026-02-02 05:32:16] 2026-02-02 10:31:37,591 | INFO     | chi2: 1.54363262713665
[2026-02-02 05:32:16] 2026-02-02 10:31:37,591 | INFO     | current chi2=1.54363262713665 (change=33.37293460987851 %)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,592 | INFO     | sum of square deviations: 1342841922.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,592 | INFO     | sum of deviations: -3429839801.999999
[2026-02-02 05:32:16] 2026-02-02 10:31:37,593 | INFO     | mean x: 1770022720.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,593 | INFO     | mean y: 2552322.7239263803
[2026-02-02 05:32:16] 2026-02-02 10:31:37,593 | INFO     | intersect: 4523482356.289187
[2026-02-02 05:32:16] 2026-02-02 10:31:37,593 | INFO     | chi2: 1.5436020883024246
[2026-02-02 05:32:16] 2026-02-02 10:31:37,593 | INFO     | current chi2=1.5436020883024246 (change=0.0019783744971809216 %)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,593 | INFO     | right removable region: 162
[2026-02-02 05:32:16] 2026-02-02 10:31:37,594 | INFO     | sum of square deviations: 1470248962.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,594 | INFO     | sum of deviations: -40569094960.5
[2026-02-02 05:32:16] 2026-02-02 10:31:37,595 | INFO     | mean x: 1770023177.5
[2026-02-02 05:32:16] 2026-02-02 10:31:37,595 | INFO     | mean y: 2566025.255952381
[2026-02-02 05:32:16] 2026-02-02 10:31:37,595 | INFO     | intersect: 48843435990.98047
[2026-02-02 05:32:16] 2026-02-02 10:31:37,595 | INFO     | chi2: 0.955808151767309
[2026-02-02 05:32:16] 2026-02-02 10:31:37,595 | INFO     | current chi2=0.955808151767309 (change=58.74491695194379 %)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,596 | INFO     | sum of square deviations: 1342841922.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,596 | INFO     | sum of deviations: -37827883762.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,597 | INFO     | mean x: 1770023330.0
[2026-02-02 05:32:16] 2026-02-02 10:31:37,597 | INFO     | mean y: 2562691.717791411
[2026-02-02 05:32:16] 2026-02-02 10:31:37,597 | INFO     | intersect: 49864155248.75159
[2026-02-02 05:32:16] 2026-02-02 10:31:37,597 | INFO     | chi2: 0.9452458007071971
[2026-02-02 05:32:16] 2026-02-02 10:31:37,597 | INFO     | current chi2=0.9452458007071971 (change=1.1050702006026978 %)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,597 | INFO     | left removable region: 20
[2026-02-02 05:32:16] 2026-02-02 10:31:37,598 | INFO     | sum of square deviations: 887813855.5
[2026-02-02 05:32:16] 2026-02-02 10:31:37,598 | INFO     | sum of deviations: -15402442629.5
[2026-02-02 05:32:16] 2026-02-02 10:31:37,598 | INFO     | mean x: 1770023299.5
[2026-02-02 05:32:16] 2026-02-02 10:31:37,598 | INFO     | mean y: 2565068.1619718308
[2026-02-02 05:32:16] 2026-02-02 10:31:37,599 | INFO     | intersect: 30710220906.753517
[2026-02-02 05:32:16] 2026-02-02 10:31:37,599 | INFO     | chi2: 0.12085977515825111
[2026-02-02 05:32:16] 2026-02-02 10:31:37,599 | INFO     | current memory leak: -17.35 B/s (using 142 data points, chi2=0.12)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,599 | INFO     | could have reported an average CPU frequency of 1812 MHz (9 samples)
[2026-02-02 05:32:16] 2026-02-02 10:31:37,599 | INFO     | ..............................
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | . Timing measurements:
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | . get job = 0 s
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | . initial setup = 8 s
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | . payload setup = 8 s
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | . stage-in = 0 s
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | . payload execution = 10518 s
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | . stage-out = 0 s
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | . log creation = 0 s
[2026-02-02 05:32:16] 2026-02-02 10:31:37,600 | INFO     | ..............................
[2026-02-02 05:32:16] 2026-02-02 10:31:38,140 | INFO     | 
[2026-02-02 05:32:16] 2026-02-02 10:31:38,140 | INFO     | job summary report
[2026-02-02 05:32:16] 2026-02-02 10:31:38,140 | INFO     | --------------------------------------------------
[2026-02-02 05:32:16] 2026-02-02 10:31:38,140 | INFO     | PanDA job id: 6993184666
[2026-02-02 05:32:16] 2026-02-02 10:31:38,140 | INFO     | task id: 48329582
[2026-02-02 05:32:16] 2026-02-02 10:31:38,141 | INFO     | errors: (none)
[2026-02-02 05:32:16] 2026-02-02 10:31:38,141 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 05:32:16] 2026-02-02 10:31:38,141 | INFO     | pilot state: finished 
[2026-02-02 05:32:16] 2026-02-02 10:31:38,141 | INFO     | transexitcode: 0
[2026-02-02 05:32:16] 2026-02-02 10:31:38,141 | INFO     | exeerrorcode: 0
[2026-02-02 05:32:16] 2026-02-02 10:31:38,141 | INFO     | exeerrordiag: 
[2026-02-02 05:32:16] 2026-02-02 10:31:38,142 | INFO     | exitcode: 0
[2026-02-02 05:32:16] 2026-02-02 10:31:38,142 | INFO     | exitmsg: OK
[2026-02-02 05:32:16] 2026-02-02 10:31:38,142 | INFO     | cpuconsumptiontime: 79803 s
[2026-02-02 05:32:16] 2026-02-02 10:31:38,142 | INFO     | nevents: 400
[2026-02-02 05:32:16] 2026-02-02 10:31:38,142 | INFO     | neventsw: 0
[2026-02-02 05:32:16] 2026-02-02 10:31:38,142 | INFO     | pid: 22951
[2026-02-02 05:32:16] 2026-02-02 10:31:38,142 | INFO     | pgrp: 22951
[2026-02-02 05:32:16] 2026-02-02 10:31:38,143 | INFO     | corecount: 8
[2026-02-02 05:32:16] 2026-02-02 10:31:38,143 | INFO     | event service: False
[2026-02-02 05:32:16] 2026-02-02 10:31:38,143 | INFO     | sizes: {0: 2278170, 1: 2278376, 11: 2278404, 10529: 2307334, 10530: 2316387, 10532: 2316415, 10533: 2316801}
[2026-02-02 05:32:16] 2026-02-02 10:31:38,143 | INFO     | --------------------------------------------------
[2026-02-02 05:32:16] 2026-02-02 10:31:38,143 | INFO     | 
[2026-02-02 05:32:16] 2026-02-02 10:31:38,143 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-02 05:32:16] 2026-02-02 10:31:38,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,175 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 05:32:16] 2026-02-02 10:31:38,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,175 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 05:32:16] 2026-02-02 10:31:38,176 | INFO     | job 6993184666 has completed (purged errors)
[2026-02-02 05:32:16] 2026-02-02 10:31:38,176 | INFO     | overall cleanup function is called
[2026-02-02 05:32:16] 2026-02-02 10:31:39,184 | INFO     | --- collectZombieJob: --- 10, [22951]
[2026-02-02 05:32:16] 2026-02-02 10:31:39,184 | INFO     | zombie collector waiting for pid 22951
[2026-02-02 05:32:16] 2026-02-02 10:31:39,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 05:32:16] 2026-02-02 10:31:39,185 | INFO     | collected zombie processes
[2026-02-02 05:32:16] 2026-02-02 10:31:39,186 | INFO     | will attempt to kill all subprocesses of pid=22951
[2026-02-02 05:32:16] 2026-02-02 10:31:39,265 | INFO     | process IDs to be killed: [22951] (in reverse order)
[2026-02-02 05:32:16] 2026-02-02 10:31:39,322 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 05:32:16] 2026-02-02 10:31:39,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 05:32:16] 2026-02-02 10:31:39,327 | INFO     | did not find any defunct processes belonging to 22951
[2026-02-02 05:32:16] 2026-02-02 10:31:39,330 | INFO     | did not find any defunct processes belonging to 22951
[2026-02-02 05:32:16] 2026-02-02 10:31:39,331 | INFO     | ready for new job
[2026-02-02 05:32:16] 2026-02-02 10:31:39,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 05:32:16] 2026-02-02 10:31:39,333 | INFO     | **************************************
[2026-02-02 05:32:16] 2026-02-02 10:31:39,333 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 05:32:16] 2026-02-02 10:31:39,333 | INFO     | **************************************
[2026-02-02 05:32:16] 2026-02-02 10:31:39,333 | INFO     | 
[2026-02-02 05:32:16] 2026-02-02 10:31:39,333 | INFO     | architecture information:
[2026-02-02 05:32:16] 2026-02-02 10:31:39,334 | INFO     | executing command: cat /etc/os-release
[2026-02-02 05:32:16] 2026-02-02 10:31:39,352 | INFO     | cat /etc/os-release:
[2026-02-02 05:32:16] NAME="CentOS Linux"
[2026-02-02 05:32:16] VERSION="7 (Core)"
[2026-02-02 05:32:16] ID="centos"
[2026-02-02 05:32:16] ID_LIKE="rhel fedora"
[2026-02-02 05:32:16] VERSION_ID="7"
[2026-02-02 05:32:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 05:32:16] ANSI_COLOR="0;31"
[2026-02-02 05:32:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 05:32:16] HOME_URL="https://www.centos.org/"
[2026-02-02 05:32:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 05:32:16] 
[2026-02-02 05:32:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 05:32:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 05:32:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 05:32:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 05:32:16] 
[2026-02-02 05:32:16] 2026-02-02 10:31:39,353 | INFO     | **************************************
[2026-02-02 05:32:16] 2026-02-02 10:31:39,856 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-02 05:32:16] 2026-02-02 10:31:39,875 | INFO     | sufficient remaining disk space (18459131904 B)
[2026-02-02 05:32:16] 2026-02-02 10:31:39,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 05:32:16] 2026-02-02 10:31:39,876 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 05:32:16] 2026-02-02 10:31:39,876 | INFO     | update_server=False
[2026-02-02 05:32:16] 2026-02-02 10:31:39,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 05:32:16] 2026-02-02 10:31:39,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:32:16] 2026-02-02 10:31:39,877 | INFO     | aborting loop
[2026-02-02 05:32:16] 2026-02-02 10:31:39,887 | INFO     | all job control threads have been joined
[2026-02-02 05:32:16] 2026-02-02 10:31:40,509 | INFO     | all payload control threads have been joined
[2026-02-02 05:32:16] 2026-02-02 10:31:40,709 | INFO     | all data control threads have been joined
[2026-02-02 05:32:16] 2026-02-02 10:31:40,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 05:32:16] 2026-02-02 10:31:40,880 | INFO     | [job] retrieve thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:40,883 | INFO     | [job] job monitor thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:40,893 | INFO     | [job] control thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:41,016 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:41,019 | INFO     | [job] validate thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:41,125 | INFO     | [data] copytool_in thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:41,357 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:41,515 | INFO     | [payload] control thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:41,715 | INFO     | [data] control thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:41,842 | INFO     | [payload] validate_post thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:41,905 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:42,071 | INFO     | [payload] failed_post thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:42,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 05:32:16] 2026-02-02 10:31:42,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:32:16] 2026-02-02 10:31:42,851 | INFO     | [data] copytool_out thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:43,692 | INFO     | [job] queue monitor thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:46,537 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:31:50,368 | INFO     | job.realtimelogging is not enabled
[2026-02-02 05:32:16] 2026-02-02 10:31:51,374 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 05:32:16] 2026-02-02 10:32:09,502 | INFO     | PID=18453 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 05:32:16] 2026-02-02 10:32:09,503 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 05:32:16] 2026-02-02 10:32:09,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 05:32:16] 2026-02-02 10:32:09,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 05:32:16] 2026-02-02 10:32:10,359 | INFO     | [monitor] cgroup control has ended
[2026-02-02 05:32:16] 2026-02-02 10:32:11,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523685095232)>', '<ExcThread(monitor, started 140522630915840)>']
[2026-02-02 05:32:16] 2026-02-02 10:32:11,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 05:32:16] 2026-02-02 10:32:11,510 | INFO     | [monitor] control thread has ended
[2026-02-02 05:32:16] 2026-02-02 10:32:16,119 | INFO     | all workflow threads have been joined
[2026-02-02 05:32:16] 2026-02-02 10:32:16,120 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 05:32:16] 2026-02-02 10:32:16,120 | INFO     | traces error code: 0
[2026-02-02 05:32:16] 2026-02-02 10:32:16,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 05:32:16] 2026-02-02 10:32:16,227 [wrapper] ==== pilot stdout END ====
[2026-02-02 05:32:16] 2026-02-02 10:32:16,232 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 05:32:16] 2026-02-02 10:32:16,237 [wrapper] pilotpid: 18453
[2026-02-02 05:32:16] 2026-02-02 10:32:16,241 [wrapper] Pilot exit status: 0
[2026-02-02 05:32:16] 2026-02-02 10:32:16,258 [wrapper] pandaids: 6993184666
[2026-02-02 05:32:16] 2026-02-02 10:32:16,300 [wrapper] cleanup supervisor_pilot 20697 18454
[2026-02-02 05:32:16] 2026-02-02 10:32:16,305 [wrapper] Test setup, not cleaning
[2026-02-02 05:32:16] 2026-02-02 10:32:16,310 [wrapper] apfmon messages muted
[2026-02-02 05:32:16] 2026-02-02 10:32:16,314 [wrapper] ==== wrapper stdout END ====
[2026-02-02 05:32:16] 2026-02-02 10:32:16,320 [wrapper] ==== wrapper stderr END ====
[2026-02-02 05:32:16]  *** Error codes and diagnostics ***
[2026-02-02 05:32:16]     "exeErrorCode": 0,
[2026-02-02 05:32:16]     "exeErrorDiag": "",
[2026-02-02 05:32:16]     "pilotErrorCode": 0,
[2026-02-02 05:32:16]     "pilotErrorDiag": "",
[2026-02-02 05:32:16]  *** Listing of results directory ***
[2026-02-02 05:32:16] total 460752
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas    584422 Feb  1 19:08 pilot3.tar.gz
[2026-02-02 05:32:16] -rwx------ 1 boincer umatlas     36322 Feb  1 19:11 runpilot2-wrapper.sh
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas      5111 Feb  1 19:14 queuedata.json
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas       100 Feb  2 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 05:32:16] -rwxr-xr-x 1 boincer umatlas      7986 Feb  2 02:35 run_atlas
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas       105 Feb  2 02:35 job.xml
[2026-02-02 05:32:16] -rw-r--r-- 2 boincer umatlas 274185450 Feb  2 02:35 EVNT.48329580._000003.pool.root.1
[2026-02-02 05:32:16] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 02:35 start_atlas.sh
[2026-02-02 05:32:16] drwxrwx--x 2 boincer umatlas      4096 Feb  2 02:35 shared
[2026-02-02 05:32:16] -rw-r--r-- 2 boincer umatlas    597765 Feb  2 02:35 input.tar.gz
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas         0 Feb  2 02:35 boinc_lockfile
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas      2597 Feb  2 02:35 pandaJob.out
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas        57 Feb  2 02:35 setup.sh.local
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas   1008367 Feb  2 02:35 agis_schedconf.cvmfs.json
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas   1511668 Feb  2 02:35 agis_ddmendpoints.agis.ALL.json
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas       431 Feb  2 02:35 workernode_map.json
[2026-02-02 05:32:16] drwx------ 5 boincer umatlas      4096 Feb  2 02:35 pilot3
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas      5909 Feb  2 05:27 init_data.xml
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas 189934791 Feb  2 05:31 HITS.48329582._000058.pool.root.1
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas       531 Feb  2 05:31 boinc_task_state.xml
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas      1050 Feb  2 05:31 memory_monitor_summary.json
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas    404629 Feb  2 05:31 log.48329582._000058.job.log.tgz.1
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas      6392 Feb  2 05:31 heartbeat.json
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas        28 Feb  2 05:32 wrapper_checkpoint.txt
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas      8192 Feb  2 05:32 boinc_mmap_file
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas        95 Feb  2 05:32 pilot_heartbeat.json
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas      4814 Feb  2 05:32 pilotlog.txt
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas   1472586 Feb  2 05:32 log.48329582._000058.job.log.1
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas       357 Feb  2 05:32 output.list
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas       620 Feb  2 05:32 runtime_log
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas   1894400 Feb  2 05:32 result.tar.gz
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas      9337 Feb  2 05:32 runtime_log.err
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas       661 Feb  2 05:32 oT3MDmtiw68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAdRKDmZ0mILo.diag
[2026-02-02 05:32:16] -rw-r--r-- 1 boincer umatlas     21026 Feb  2 05:32 stderr.txt
[2026-02-02 05:32:16] HITS file was successfully produced:
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas 189934791 Feb  2 05:31 shared/HITS.pool.root.1
[2026-02-02 05:32:16]  *** Contents of shared directory: ***
[2026-02-02 05:32:16] total 455696
[2026-02-02 05:32:16] -rw-r--r-- 2 boincer umatlas 274185450 Feb  2 02:35 ATLAS.root_0
[2026-02-02 05:32:16] -rw-r--r-- 2 boincer umatlas     15845 Feb  2 02:35 start_atlas.sh
[2026-02-02 05:32:16] -rw-r--r-- 2 boincer umatlas    597765 Feb  2 02:35 input.tar.gz
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas 189934791 Feb  2 05:31 HITS.pool.root.1
[2026-02-02 05:32:16] -rw------- 1 boincer umatlas   1894400 Feb  2 05:32 result.tar.gz
05:32:17 (14773): run_atlas exited; CPU time 79770.837557
05:32:17 (14773): called boinc_finish(0)

</stderr_txt>
]]>

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