Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:27:49 (868782): wrapper (7.7.26015): starting
00:27:49 (868782): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 00:27:49] Arguments: --nthreads 4
[2026-02-03 00:27:49] Threads: 4
[2026-02-03 00:27:49] Checking for CVMFS
[2026-02-03 00:27:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 00:27:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 00:27:50] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 00:27:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 00:27:50] 2.9.2.0 3018 5024 92992 155810 3 49 24030801 36864001 0 130560 0 2429939 99.986 181961 12982 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-03 00:27:50] CVMFS is ok
[2026-02-03 00:27:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 00:27:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 00:27:50] Further information can be found at the LHC@home message board.
[2026-02-03 00:27:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 00:27:50] Checking for apptainer binary...
[2026-02-03 00:27:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 00:27:50] Running /usr/bin/apptainer --version
[2026-02-03 00:27:50] apptainer version 1.4.1-1.1
[2026-02-03 00:27:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 00:27:50] thA334
[2026-02-03 00:27:50] apptainer works
[2026-02-03 00:27:50] Set ATHENA_PROC_NUMBER=4
[2026-02-03 00:27:50] Set ATHENA_CORE_NUMBER=4
[2026-02-03 00:27:50] Starting ATLAS job with PandaID=6996648553
[2026-02-03 00:27:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 01:40:13]  *** The last 200 lines of the pilot log: ***
[2026-02-03 01:40:13] 2026-02-03 00:39:20,517 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 01:40:13] 2026-02-03 00:39:20,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 01:40:13] 2026-02-03 00:39:20,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 01:40:13] 2026-02-03 00:39:21,132 | WARNING  | process 877414 can no longer be monitored (due to stat problems) - aborting
[2026-02-03 01:40:13] 2026-02-03 00:39:21,162 | INFO     | all data control threads have been joined
[2026-02-03 01:40:13] 2026-02-03 00:39:21,164 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 01:40:13] 2026-02-03 00:39:21,203 | INFO     | number of running child processes to parent process 877414: 1
[2026-02-03 01:40:13] 2026-02-03 00:39:21,203 | INFO     | maximum number of monitored processes: 6
[2026-02-03 01:40:13] 2026-02-03 00:39:21,203 | INFO     | aborting job monitoring since job object (job id=6996648553) has expired
[2026-02-03 01:40:13] 2026-02-03 00:39:21,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:40:13] 2026-02-03 00:39:21,203 | INFO     | will abort loop
[2026-02-03 01:40:13] 2026-02-03 00:39:21,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 01:40:13] 2026-02-03 00:39:21,522 | INFO     | [job] retrieve thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:21,584 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:21,702 | INFO     | [payload] failed_post thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:21,752 | INFO     | [data] copytool_in thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:21,876 | INFO     | all job control threads have been joined
[2026-02-03 01:40:13] 2026-02-03 00:39:21,956 | INFO     | all payload control threads have been joined
[2026-02-03 01:40:13] 2026-02-03 00:39:22,168 | INFO     | [data] control thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:22,196 | INFO     | [payload] validate_post thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:22,209 | INFO     | [job] job monitor thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:22,881 | INFO     | [job] control thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:22,906 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:22,914 | INFO     | [job] validate thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:22,962 | INFO     | [payload] control thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:23,000 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:23,364 | INFO     | [data] copytool_out thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:23,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:40:13] 2026-02-03 00:39:24,446 | INFO     | [job] queue monitor thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:24,524 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:39:30,665 | INFO     | job.realtimelogging is not enabled
[2026-02-03 01:40:13] 2026-02-03 00:39:31,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 01:40:13] 2026-02-03 00:40:06,809 | INFO     | [monitor] cgroup control has ended
[2026-02-03 01:40:13] 2026-02-03 00:40:08,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911964780352)>', '<ExcThread(monitor, started 139911017514752)>']
[2026-02-03 01:40:13] 2026-02-03 00:40:08,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 01:40:13] 2026-02-03 00:40:08,773 | INFO     | [monitor] control thread has ended
[2026-02-03 01:40:13] 2026-02-03 00:40:13,049 | INFO     | all workflow threads have been joined
[2026-02-03 01:40:13] 2026-02-03 00:40:13,049 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 01:40:13] 2026-02-03 00:40:13,049 | INFO     | traces error code: 0
[2026-02-03 01:40:13] 2026-02-03 00:40:13,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 01:40:13] 2026-02-03 00:40:13,113 [wrapper] ==== pilot stdout END ====
[2026-02-03 01:40:13] 2026-02-03 00:40:13,117 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 01:40:13] 2026-02-03 00:40:13,121 [wrapper] pilotpid: 872893
[2026-02-03 01:40:13] 2026-02-03 00:40:13,124 [wrapper] Pilot exit status: 0
[2026-02-03 01:40:13] 2026-02-03 00:40:13,135 [wrapper] pandaids: 6996648553
[2026-02-03 01:40:13] 2026-02-03 00:40:13,156 [wrapper] cleanup supervisor_pilot  882633 872894
[2026-02-03 01:40:13] 2026-02-03 00:40:13,160 [wrapper] Test setup, not cleaning
[2026-02-03 01:40:13] 2026-02-03 00:40:13,163 [wrapper] apfmon messages muted
[2026-02-03 01:40:13] 2026-02-03 00:40:13,167 [wrapper] ==== wrapper stdout END ====
[2026-02-03 01:40:13] 2026-02-03 00:40:13,170 [wrapper] ==== wrapper stderr END ====
[2026-02-03 01:40:13]  *** Error codes and diagnostics ***
[2026-02-03 01:40:13]     "exeErrorCode": 0,
[2026-02-03 01:40:13]     "exeErrorDiag": "",
[2026-02-03 01:40:13]     "pilotErrorCode": 0,
[2026-02-03 01:40:13]     "pilotErrorDiag": "",
[2026-02-03 01:40:13]  *** Listing of results directory ***
[2026-02-03 01:40:13] total 673484
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc    584422 Feb  2 08:08 pilot3.tar.gz
[2026-02-03 01:40:13] -rwx------ 1 boinc boinc     36322 Feb  2 08:08 runpilot2-wrapper.sh
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc      5111 Feb  2 08:09 queuedata.json
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc       100 Feb  3 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 01:40:13] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 00:27 run_atlas
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc       105 Feb  3 00:27 job.xml
[2026-02-03 01:40:13] -rw-r--r-- 2 boinc boinc 504208717 Feb  3 00:27 EVNT.48317929._000236.pool.root.1
[2026-02-03 01:40:13] drwxrwx--x 2 boinc boinc      4096 Feb  3 00:27 shared
[2026-02-03 01:40:13] -rw-r--r-- 2 boinc boinc    597752 Feb  3 00:27 input.tar.gz
[2026-02-03 01:40:13] -rw-r--r-- 2 boinc boinc     15845 Feb  3 00:27 start_atlas.sh
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc         0 Feb  3 00:27 boinc_setup_complete
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc      6369 Feb  3 00:27 init_data.xml
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc         0 Feb  3 00:27 boinc_lockfile
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc      2511 Feb  3 00:27 pandaJob.out
[2026-02-03 01:40:13] -rw------- 1 boinc boinc   1009316 Feb  3 00:27 agis_schedconf.cvmfs.json
[2026-02-03 01:40:13] -rw------- 1 boinc boinc   1511668 Feb  3 00:27 agis_ddmendpoints.agis.ALL.json
[2026-02-03 01:40:13] -rw------- 1 boinc boinc       418 Feb  3 00:28 workernode_map.json
[2026-02-03 01:40:13] drwx------ 5 boinc boinc      4096 Feb  3 00:28 pilot3
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc       530 Feb  3 01:38 boinc_task_state.xml
[2026-02-03 01:40:13] -rw------- 1 boinc boinc 179761947 Feb  3 01:38 HITS.48317931._013059.pool.root.1
[2026-02-03 01:40:13] -rw------- 1 boinc boinc      1021 Feb  3 01:39 memory_monitor_summary.json
[2026-02-03 01:40:13] -rw------- 1 boinc boinc    244621 Feb  3 01:39 log.48317931._013059.job.log.tgz.1
[2026-02-03 01:40:13] -rw------- 1 boinc boinc      6305 Feb  3 01:39 heartbeat.json
[2026-02-03 01:40:13] -rw------- 1 boinc boinc        95 Feb  3 01:39 pilot_heartbeat.json
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc      8192 Feb  3 01:39 boinc_mmap_file
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc        27 Feb  3 01:39 wrapper_checkpoint.txt
[2026-02-03 01:40:13] -rw------- 1 boinc boinc      5146 Feb  3 01:40 pilotlog.txt
[2026-02-03 01:40:13] -rw------- 1 boinc boinc    633662 Feb  3 01:40 log.48317931._013059.job.log.1
[2026-02-03 01:40:13] -rw------- 1 boinc boinc       357 Feb  3 01:40 output.list
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc       620 Feb  3 01:40 runtime_log
[2026-02-03 01:40:13] -rw------- 1 boinc boinc    890880 Feb  3 01:40 result.tar.gz
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc      8896 Feb  3 01:40 runtime_log.err
[2026-02-03 01:40:13] -rw------- 1 boinc boinc       657 Feb  3 01:40 4h6MDmWE368nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlISKDmqCB3nn.diag
[2026-02-03 01:40:13] -rw-r--r-- 1 boinc boinc      7559 Feb  3 01:40 stderr.txt
[2026-02-03 01:40:13] HITS file was successfully produced:
[2026-02-03 01:40:13] -rw------- 1 boinc boinc 179761947 Feb  3 01:38 shared/HITS.pool.root.1
[2026-02-03 01:40:13]  *** Contents of shared directory: ***
[2026-02-03 01:40:13] total 669424
[2026-02-03 01:40:13] -rw-r--r-- 2 boinc boinc 504208717 Feb  3 00:27 ATLAS.root_0
[2026-02-03 01:40:13] -rw-r--r-- 2 boinc boinc    597752 Feb  3 00:27 input.tar.gz
[2026-02-03 01:40:13] -rw-r--r-- 2 boinc boinc     15845 Feb  3 00:27 start_atlas.sh
[2026-02-03 01:40:13] -rw------- 1 boinc boinc 179761947 Feb  3 01:38 HITS.pool.root.1
[2026-02-03 01:40:13] -rw------- 1 boinc boinc    890880 Feb  3 01:40 result.tar.gz
01:40:15 (868782): run_atlas exited; CPU time 16087.078388
01:40:15 (868782): called boinc_finish(0)

</stderr_txt>
]]>

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