Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:14:10 (15422): wrapper (7.7.26015): starting
07:14:10 (15422): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 07:14:10] Arguments: --nthreads 8
[2026-02-03 07:14:10] Threads: 8
[2026-02-03 07:14:10] Checking for CVMFS
[2026-02-03 07:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 07:14:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 07:14:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 07:14:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 07:14:16] 2.13.3.0 4462 14 44720 155802 2 186 2421570 4096000 828 130560 0 33675 99.950 2881 140 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.189.146:3126 1
[2026-02-03 07:14:16] CVMFS is ok
[2026-02-03 07:14:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 07:14:16] Checking for apptainer binary...
[2026-02-03 07:14:16] apptainer is not installed, using version from CVMFS
[2026-02-03 07:14:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 07:14:17] gp
[2026-02-03 07:14:17] apptainer works
[2026-02-03 07:14:17] Set ATHENA_PROC_NUMBER=8
[2026-02-03 07:14:17] Set ATHENA_CORE_NUMBER=8
[2026-02-03 07:14:17] Starting ATLAS job with PandaID=6993185755
[2026-02-03 07:14:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 09:53:15]  *** The last 200 lines of the pilot log: ***
[2026-02-03 09:53:15] 2026-02-02 22:52:14,853 | INFO     | number of running child processes to parent process 23963: 1
[2026-02-03 09:53:15] 2026-02-02 22:52:14,853 | INFO     | maximum number of monitored processes: 6
[2026-02-03 09:53:15] 2026-02-02 22:52:15,448 | INFO     | job 6993185755 has state=finished
[2026-02-03 09:53:15] 2026-02-02 22:52:15,448 | INFO     | preparing for final server update for job 6993185755 in state='finished'
[2026-02-03 09:53:15] 2026-02-02 22:52:15,449 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-6993185755/jobReport.json
[2026-02-03 09:53:15] 2026-02-02 22:52:15,452 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-02-03 09:53:15] 2026-02-02 22:52:15,453 | INFO     | this job has now completed (state=finished)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,453 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,453 | INFO     | log transfer has been attempted: DONE
[2026-02-03 09:53:15] 2026-02-02 22:52:15,454 | INFO     | job 6993185755 has finished - writing final server update
[2026-02-03 09:53:15] 2026-02-02 22:52:15,454 | INFO     | total number of processed events: 400 (read)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,458 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6993185755/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,459 | INFO     | extracted standard info from prmon json
[2026-02-03 09:53:15] 2026-02-02 22:52:15,459 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 09:53:15] 2026-02-02 22:52:15,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 09:53:15] 2026-02-02 22:52:15,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 09:53:15] 2026-02-02 22:52:15,460 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 09:53:15] 2026-02-02 22:52:15,464 | INFO     | fitting pss+swap vs Time
[2026-02-03 09:53:15] 2026-02-02 22:52:15,465 | INFO     | sum of square deviations: 1154663510.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,466 | INFO     | sum of deviations: 27543846487.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,467 | INFO     | mean x: 1770068017.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,467 | INFO     | mean y: 2476652.4838709678
[2026-02-03 09:53:15] 2026-02-02 22:52:15,467 | INFO     | intersect: -42221497093.59606
[2026-02-03 09:53:15] 2026-02-02 22:52:15,468 | INFO     | chi2: 2.9754804765502714
[2026-02-03 09:53:15] 2026-02-02 22:52:15,468 | INFO     | sum of square deviations: 1046484737.5
[2026-02-03 09:53:15] 2026-02-02 22:52:15,469 | INFO     | sum of deviations: 36052390159.5
[2026-02-03 09:53:15] 2026-02-02 22:52:15,470 | INFO     | mean x: 1770067864.5
[2026-02-03 09:53:15] 2026-02-02 22:52:15,470 | INFO     | mean y: 2488286.22
[2026-02-03 09:53:15] 2026-02-02 22:52:15,470 | INFO     | intersect: -60978025784.34186
[2026-02-03 09:53:15] 2026-02-02 22:52:15,470 | INFO     | chi2: 2.3029428980661786
[2026-02-03 09:53:15] 2026-02-02 22:52:15,471 | INFO     | current chi2=2.3029428980661786 (change=22.602654723643926 %)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,471 | INFO     | right removable region: 149
[2026-02-03 09:53:15] 2026-02-02 22:52:15,471 | INFO     | sum of square deviations: 1046484737.5
[2026-02-03 09:53:15] 2026-02-02 22:52:15,472 | INFO     | sum of deviations: -7768553953.500001
[2026-02-03 09:53:15] 2026-02-02 22:52:15,473 | INFO     | mean x: 1770068169.5
[2026-02-03 09:53:15] 2026-02-02 22:52:15,473 | INFO     | mean y: 2526200.0866666664
[2026-02-03 09:53:15] 2026-02-02 22:52:15,473 | INFO     | intersect: 13142584132.497492
[2026-02-03 09:53:15] 2026-02-02 22:52:15,473 | INFO     | chi2: 0.8615645325091079
[2026-02-03 09:53:15] 2026-02-02 22:52:15,474 | INFO     | current chi2=0.8615645325091079 (change=71.04452409286203 %)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,474 | INFO     | sum of square deviations: 945282840.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,475 | INFO     | sum of deviations: -9710701264.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,475 | INFO     | mean x: 1770068322.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,476 | INFO     | mean y: 2528921.331034483
[2026-02-03 09:53:15] 2026-02-02 22:52:15,476 | INFO     | intersect: 18186086227.641342
[2026-02-03 09:53:15] 2026-02-02 22:52:15,476 | INFO     | chi2: 0.7683548714572166
[2026-02-03 09:53:15] 2026-02-02 22:52:15,476 | INFO     | current chi2=0.7683548714572166 (change=10.818651132311551 %)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,477 | INFO     | left removable region: 20
[2026-02-03 09:53:15] 2026-02-02 22:52:15,477 | INFO     | sum of square deviations: 665612480.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,478 | INFO     | sum of deviations: 2760622832.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,478 | INFO     | mean x: 1770068444.0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,478 | INFO     | mean y: 2537537.1860465114
[2026-02-03 09:53:15] 2026-02-02 22:52:15,479 | INFO     | intersect: -7338808227.107785
[2026-02-03 09:53:15] 2026-02-02 22:52:15,479 | INFO     | chi2: 0.0021139909461249167
[2026-02-03 09:53:15] 2026-02-02 22:52:15,479 | INFO     | current memory leak: 4.15 B/s (using 129 data points, chi2=0.00)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,480 | INFO     | could have reported an average CPU frequency of 1739 MHz (9 samples)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,480 | INFO     | ..............................
[2026-02-03 09:53:15] 2026-02-02 22:52:15,481 | INFO     | . Timing measurements:
[2026-02-03 09:53:15] 2026-02-02 22:52:15,481 | INFO     | . get job = 0 s
[2026-02-03 09:53:15] 2026-02-02 22:52:15,481 | INFO     | . initial setup = 12 s
[2026-02-03 09:53:15] 2026-02-02 22:52:15,481 | INFO     | . payload setup = 8 s
[2026-02-03 09:53:15] 2026-02-02 22:52:15,481 | INFO     | . stage-in = 0 s
[2026-02-03 09:53:15] 2026-02-02 22:52:15,481 | INFO     | . payload execution = 9412 s
[2026-02-03 09:53:15] 2026-02-02 22:52:15,481 | INFO     | . stage-out = 0 s
[2026-02-03 09:53:15] 2026-02-02 22:52:15,482 | INFO     | . log creation = 0 s
[2026-02-03 09:53:15] 2026-02-02 22:52:15,482 | INFO     | ..............................
[2026-02-03 09:53:15] 2026-02-02 22:52:15,598 | INFO     | time since job start (9441s) is within the limit (349056.0s)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,934 | INFO     | 
[2026-02-03 09:53:15] 2026-02-02 22:52:15,934 | INFO     | job summary report
[2026-02-03 09:53:15] 2026-02-02 22:52:15,934 | INFO     | --------------------------------------------------
[2026-02-03 09:53:15] 2026-02-02 22:52:15,934 | INFO     | PanDA job id: 6993185755
[2026-02-03 09:53:15] 2026-02-02 22:52:15,935 | INFO     | task id: 48318034
[2026-02-03 09:53:15] 2026-02-02 22:52:15,935 | INFO     | errors: (none)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,935 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 09:53:15] 2026-02-02 22:52:15,935 | INFO     | pilot state: finished 
[2026-02-03 09:53:15] 2026-02-02 22:52:15,935 | INFO     | transexitcode: 0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,935 | INFO     | exeerrorcode: 0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,935 | INFO     | exeerrordiag: 
[2026-02-03 09:53:15] 2026-02-02 22:52:15,936 | INFO     | exitcode: 0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,936 | INFO     | exitmsg: OK
[2026-02-03 09:53:15] 2026-02-02 22:52:15,936 | INFO     | cpuconsumptiontime: 67562 s
[2026-02-03 09:53:15] 2026-02-02 22:52:15,936 | INFO     | nevents: 400
[2026-02-03 09:53:15] 2026-02-02 22:52:15,936 | INFO     | neventsw: 0
[2026-02-03 09:53:15] 2026-02-02 22:52:15,936 | INFO     | pid: 23963
[2026-02-03 09:53:15] 2026-02-02 22:52:15,936 | INFO     | pgrp: 23963
[2026-02-03 09:53:15] 2026-02-02 22:52:15,937 | INFO     | corecount: 8
[2026-02-03 09:53:15] 2026-02-02 22:52:15,937 | INFO     | event service: False
[2026-02-03 09:53:15] 2026-02-02 22:52:15,937 | INFO     | sizes: {0: 2277808, 1: 2278269, 11: 2278269, 9425: 2306582, 9427: 2315650, 9430: 2315880}
[2026-02-03 09:53:15] 2026-02-02 22:52:15,937 | INFO     | --------------------------------------------------
[2026-02-03 09:53:15] 2026-02-02 22:52:15,937 | INFO     | 
[2026-02-03 09:53:15] 2026-02-02 22:52:15,937 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-03 09:53:15] 2026-02-02 22:52:15,978 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,979 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,979 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,979 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,981 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,981 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,981 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,982 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,982 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 09:53:15] 2026-02-02 22:52:15,982 | INFO     | job 6993185755 has completed (purged errors)
[2026-02-03 09:53:15] 2026-02-02 22:52:15,983 | INFO     | overall cleanup function is called
[2026-02-03 09:53:15] 2026-02-02 22:52:16,994 | INFO     | --- collectZombieJob: --- 10, [23963]
[2026-02-03 09:53:15] 2026-02-02 22:52:16,995 | INFO     | zombie collector waiting for pid 23963
[2026-02-03 09:53:15] 2026-02-02 22:52:16,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 09:53:15] 2026-02-02 22:52:16,995 | INFO     | collected zombie processes
[2026-02-03 09:53:15] 2026-02-02 22:52:16,995 | INFO     | will attempt to kill all subprocesses of pid=23963
[2026-02-03 09:53:15] 2026-02-02 22:52:17,106 | INFO     | process IDs to be killed: [23963] (in reverse order)
[2026-02-03 09:53:15] 2026-02-02 22:52:17,181 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 09:53:15] 2026-02-02 22:52:17,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 09:53:15] 2026-02-02 22:52:17,184 | INFO     | did not find any defunct processes belonging to 23963
[2026-02-03 09:53:15] 2026-02-02 22:52:17,186 | INFO     | did not find any defunct processes belonging to 23963
[2026-02-03 09:53:15] 2026-02-02 22:52:17,186 | INFO     | ready for new job
[2026-02-03 09:53:15] 2026-02-02 22:52:17,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 09:53:15] 2026-02-02 22:52:17,188 | INFO     | **************************************
[2026-02-03 09:53:15] 2026-02-02 22:52:17,188 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 09:53:15] 2026-02-02 22:52:17,188 | INFO     | **************************************
[2026-02-03 09:53:15] 2026-02-02 22:52:17,188 | INFO     | 
[2026-02-03 09:53:15] 2026-02-02 22:52:17,189 | INFO     | architecture information:
[2026-02-03 09:53:15] 2026-02-02 22:52:17,189 | INFO     | executing command: cat /etc/os-release
[2026-02-03 09:53:15] 2026-02-02 22:52:17,206 | INFO     | cat /etc/os-release:
[2026-02-03 09:53:15] NAME="CentOS Linux"
[2026-02-03 09:53:15] VERSION="7 (Core)"
[2026-02-03 09:53:15] ID="centos"
[2026-02-03 09:53:15] ID_LIKE="rhel fedora"
[2026-02-03 09:53:15] VERSION_ID="7"
[2026-02-03 09:53:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 09:53:15] ANSI_COLOR="0;31"
[2026-02-03 09:53:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 09:53:15] HOME_URL="https://www.centos.org/"
[2026-02-03 09:53:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 09:53:15] 
[2026-02-03 09:53:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 09:53:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 09:53:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 09:53:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 09:53:15] 
[2026-02-03 09:53:15] 2026-02-02 22:52:17,207 | INFO     | **************************************
[2026-02-03 09:53:15] 2026-02-02 22:52:17,710 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-03 09:53:15] 2026-02-02 22:52:17,746 | INFO     | sufficient remaining disk space (27106738176 B)
[2026-02-03 09:53:15] 2026-02-02 22:52:17,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 09:53:15] 2026-02-02 22:52:17,747 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 09:53:15] 2026-02-02 22:52:17,747 | INFO     | update_server=False
[2026-02-03 09:53:15] 2026-02-02 22:52:17,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 09:53:15] 2026-02-02 22:52:17,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 09:53:15] 2026-02-02 22:52:18,286 | INFO     | all data control threads have been joined
[2026-02-03 09:53:15] 2026-02-02 22:52:18,287 | INFO     | all payload control threads have been joined
[2026-02-03 09:53:15] 2026-02-02 22:52:18,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 09:53:15] 2026-02-02 22:52:18,363 | INFO     | aborting loop
[2026-02-03 09:53:15] 2026-02-02 22:52:18,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 09:53:15] 2026-02-02 22:52:18,754 | INFO     | [job] retrieve thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:18,918 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,089 | INFO     | [payload] failed_post thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,133 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,170 | INFO     | all job control threads have been joined
[2026-02-03 09:53:15] 2026-02-02 22:52:19,253 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,293 | INFO     | [payload] control thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,294 | INFO     | [data] control thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,369 | INFO     | [job] job monitor thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,520 | INFO     | [data] copytool_in thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,864 | INFO     | [data] copytool_out thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,865 | INFO     | [payload] validate_post thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:19,902 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:20,023 | INFO     | [job] validate thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:20,176 | INFO     | [job] control thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:20,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 09:53:15] 2026-02-02 22:52:21,590 | INFO     | [job] queue monitor thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:22,479 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 09:53:15] 2026-02-02 22:52:48,803 | INFO     | PID=19551 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 09:53:15] 2026-02-02 22:52:48,803 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 09:53:15] 2026-02-02 22:52:48,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 09:53:15] 2026-02-02 22:52:48,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 09:53:15] 2026-02-02 22:53:09,028 | INFO     | [monitor] cgroup control has ended
[2026-02-03 09:53:15] 2026-02-02 22:53:09,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137302282676032)>', '<ExcThread(monitor, started 137301883598592)>']
[2026-02-03 09:53:15] 2026-02-02 22:53:09,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 09:53:15] 2026-02-02 22:53:09,916 | INFO     | [monitor] control thread has ended
[2026-02-03 09:53:15] 2026-02-02 22:53:14,900 | INFO     | all workflow threads have been joined
[2026-02-03 09:53:15] 2026-02-02 22:53:14,900 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 09:53:15] 2026-02-02 22:53:14,900 | INFO     | traces error code: 0
[2026-02-03 09:53:15] 2026-02-02 22:53:14,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 09:53:15] 2026-02-02 22:53:15,053 [wrapper] ==== pilot stdout END ====
[2026-02-03 09:53:15] 2026-02-02 22:53:15,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 09:53:15] 2026-02-02 22:53:15,064 [wrapper] pilotpid: 19551
[2026-02-03 09:53:15] 2026-02-02 22:53:15,069 [wrapper] Pilot exit status: 0
[2026-02-03 09:53:15] 2026-02-02 22:53:15,089 [wrapper] pandaids: 6993185755
[2026-02-03 09:53:15] 2026-02-02 22:53:15,151 [wrapper] cleanup supervisor_pilot   30015 19552
[2026-02-03 09:53:15] 2026-02-02 22:53:15,157 [wrapper] Test setup, not cleaning
[2026-02-03 09:53:15] 2026-02-02 22:53:15,162 [wrapper] apfmon messages muted
[2026-02-03 09:53:15] 2026-02-02 22:53:15,167 [wrapper] ==== wrapper stdout END ====
[2026-02-03 09:53:15] 2026-02-02 22:53:15,172 [wrapper] ==== wrapper stderr END ====
[2026-02-03 09:53:15]  *** Error codes and diagnostics ***
[2026-02-03 09:53:15]     "exeErrorCode": 0,
[2026-02-03 09:53:15]     "exeErrorDiag": "",
[2026-02-03 09:53:15]     "pilotErrorCode": 0,
[2026-02-03 09:53:15]     "pilotErrorDiag": "",
[2026-02-03 09:53:15]  *** Listing of results directory ***
[2026-02-03 09:53:15] total 676588
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc    584422 Feb  2 14:02 pilot3.tar.gz
[2026-02-03 09:53:15] -rwx------ 1 boinc boinc     36322 Feb  2 14:03 runpilot2-wrapper.sh
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc      5111 Feb  2 14:03 queuedata.json
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc       100 Feb  3 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 09:53:15] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 07:14 run_atlas
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc       105 Feb  3 07:14 job.xml
[2026-02-03 09:53:15] -rw-r--r-- 2 boinc boinc 501795692 Feb  3 07:14 EVNT.48318032._000094.pool.root.1
[2026-02-03 09:53:15] drwxrwx--x 2 boinc boinc      4096 Feb  3 07:14 shared
[2026-02-03 09:53:15] -rw-r--r-- 2 boinc boinc    597758 Feb  3 07:14 input.tar.gz
[2026-02-03 09:53:15] -rw-r--r-- 2 boinc boinc     15845 Feb  3 07:14 start_atlas.sh
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc         0 Feb  3 07:14 boinc_setup_complete
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc      9217 Feb  3 07:14 init_data.xml
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc         0 Feb  3 07:14 boinc_lockfile
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc      2535 Feb  3 07:14 pandaJob.out
[2026-02-03 09:53:15] -rw------- 1 boinc boinc   1009324 Feb  3 07:14 agis_schedconf.cvmfs.json
[2026-02-03 09:53:15] -rw------- 1 boinc boinc   1511668 Feb  3 07:14 agis_ddmendpoints.agis.ALL.json
[2026-02-03 09:53:15] -rw------- 1 boinc boinc       416 Feb  3 07:14 workernode_map.json
[2026-02-03 09:53:15] drwx------ 5 boinc boinc      4096 Feb  3 07:14 pilot3
[2026-02-03 09:53:15] -rw------- 1 boinc boinc 183683472 Feb  3 09:51 HITS.48318034._004932.pool.root.1
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc       530 Feb  3 09:52 boinc_task_state.xml
[2026-02-03 09:53:15] -rw------- 1 boinc boinc      1032 Feb  3 09:52 memory_monitor_summary.json
[2026-02-03 09:53:15] -rw------- 1 boinc boinc    388764 Feb  3 09:52 log.48318034._004932.job.log.tgz.1
[2026-02-03 09:53:15] -rw------- 1 boinc boinc      6310 Feb  3 09:52 heartbeat.json
[2026-02-03 09:53:15] -rw------- 1 boinc boinc        95 Feb  3 09:52 pilot_heartbeat.json
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc      8192 Feb  3 09:53 boinc_mmap_file
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc        27 Feb  3 09:53 wrapper_checkpoint.txt
[2026-02-03 09:53:15] -rw------- 1 boinc boinc      4749 Feb  3 09:53 pilotlog.txt
[2026-02-03 09:53:15] -rw------- 1 boinc boinc   1313296 Feb  3 09:53 log.48318034._004932.job.log.1
[2026-02-03 09:53:15] -rw------- 1 boinc boinc       357 Feb  3 09:53 output.list
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc       620 Feb  3 09:53 runtime_log
[2026-02-03 09:53:15] -rw------- 1 boinc boinc   1720320 Feb  3 09:53 result.tar.gz
[2026-02-03 09:53:15] -rw------- 1 boinc boinc       641 Feb  3 09:53 ZQrKDmlOz68n9Rq4apOajLDm4fhM0noT9bVooX4SDm7LRKDmd1qrXn.diag
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc      8863 Feb  3 09:53 runtime_log.err
[2026-02-03 09:53:15] -rw-r--r-- 1 boinc boinc     20941 Feb  3 09:53 stderr.txt
[2026-02-03 09:53:15] HITS file was successfully produced:
[2026-02-03 09:53:15] -rw------- 1 boinc boinc 183683472 Feb  3 09:51 shared/HITS.pool.root.1
[2026-02-03 09:53:15]  *** Contents of shared directory: ***
[2026-02-03 09:53:15] total 671704
[2026-02-03 09:53:15] -rw-r--r-- 2 boinc boinc 501795692 Feb  3 07:14 ATLAS.root_0
[2026-02-03 09:53:15] -rw-r--r-- 2 boinc boinc    597758 Feb  3 07:14 input.tar.gz
[2026-02-03 09:53:15] -rw-r--r-- 2 boinc boinc     15845 Feb  3 07:14 start_atlas.sh
[2026-02-03 09:53:15] -rw------- 1 boinc boinc 183683472 Feb  3 09:51 HITS.pool.root.1
[2026-02-03 09:53:15] -rw------- 1 boinc boinc   1720320 Feb  3 09:53 result.tar.gz
09:53:16 (15422): run_atlas exited; CPU time 67554.676360
09:53:16 (15422): called boinc_finish(0)

</stderr_txt>
]]>

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