Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-02 23:00:28 (39156): vboxwrapper version 26210
2026-02-02 23:00:28 (39156): BOINC client version: 7.16.11
2026-02-02 23:00:28 (39156): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-02-02 23:00:29 (39156): Successfully copied 'init_data.xml' to the shared directory.
2026-02-02 23:00:29 (39156): Create VM. (boinc_42e963232de7089f, slot#1)
2026-02-02 23:00:30 (39156): Setting Memory Size for VM. (4400MB)
2026-02-02 23:00:30 (39156): Setting CPU Count for VM. (4)
2026-02-02 23:00:30 (39156): Setting Chipset Options for VM.
2026-02-02 23:00:30 (39156): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-02 23:00:31 (39156): Setting Boot Options for VM.
2026-02-02 23:00:32 (39156): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-02 23:00:32 (39156): Enabling VM Network Access.
2026-02-02 23:00:32 (39156): Disabling USB Support for VM.
2026-02-02 23:00:32 (39156): Disabling COM Port Support for VM.
2026-02-02 23:00:33 (39156): Disabling LPT Port Support for VM.
2026-02-02 23:00:33 (39156): Disabling Audio Support for VM.
2026-02-02 23:00:33 (39156): Disabling Clipboard Support for VM.
2026-02-02 23:00:33 (39156): Disabling Drag and Drop Support for VM.
2026-02-02 23:00:34 (39156): Adding storage controller(s) to VM.
2026-02-02 23:00:34 (39156): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-02 23:00:35 (39156): Adding VirtualBox Guest Additions to VM.
2026-02-02 23:00:35 (39156): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-02 23:00:35 (39156): forwarding host port 52608 to guest port 80
2026-02-02 23:00:36 (39156): Enabling remote desktop for VM.
2026-02-02 23:00:36 (39156): Required extension pack not installed, remote desktop not enabled.
2026-02-02 23:00:36 (39156): Enabling shared directory for VM.
2026-02-02 23:00:36 (39156): Starting VM using VBoxManage interface. (boinc_42e963232de7089f, slot#1)
2026-02-02 23:00:41 (39156): Successfully started VM. (PID = '14428')
2026-02-02 23:00:41 (39156): Reporting VM Process ID to BOINC.
2026-02-02 23:00:41 (39156): Guest Log: BIOS: VirtualBox 6.1.12
2026-02-02 23:00:41 (39156): Guest Log: CPUID EDX: 0x178bfbff
2026-02-02 23:00:41 (39156): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-02 23:00:41 (39156): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-02 23:00:41 (39156): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-02 23:00:41 (39156): Detected: Web Application Enabled (http://localhost:52608)
2026-02-02 23:00:41 (39156): Preference change detected
2026-02-02 23:00:41 (39156): Setting CPU throttle for VM. (50%)
2026-02-02 23:00:41 (39156): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-02 23:00:43 (39156): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-02 23:00:43 (39156): Guest Log: BIOS: Booting from Hard Disk...
2026-02-02 23:00:47 (39156): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-02 23:00:47 (39156): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-02 23:00:47 (39156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-02 23:00:56 (39156): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-02 23:00:56 (39156): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-02 23:01:15 (39156): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-02 23:01:15 (39156): Guest Log: 00:00:00.000178 main     Log opened 2026-02-02T23:01:13.181186000Z
2026-02-02 23:01:15 (39156): Guest Log: 00:00:00.000275 main     OS Product: Linux
2026-02-02 23:01:15 (39156): Guest Log: 00:00:00.000375 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-02 23:01:15 (39156): Guest Log: 00:00:00.000422 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-02 23:01:15 (39156): Guest Log: 00:00:00.000453 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-02 23:01:15 (39156): Guest Log: 00:00:00.000454 main     Process ID: 1336
2026-02-02 23:01:15 (39156): Guest Log: 00:00:00.000455 main     Package type: LINUX_64BITS_GENERIC
2026-02-02 23:01:15 (39156): Guest Log: 00:00:00.002417 main     5.2.32 r132073 started. Verbose level = 0
2026-02-02 23:01:15 (39156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-02 23:01:15 (39156): Guest Log: [INFO] Mounting shared directory
2026-02-02 23:01:15 (39156): Guest Log: [INFO] Checking for init_data.xml
2026-02-02 23:01:25 (39156): Guest Log: 00:00:10.041679 timesync vgsvcTimeSyncWorker: Radical guest time change: -37 788 497 095 000ns (GuestNow=1 770 035 484 689 263 000 ns GuestLast=1 770 073 273 186 358 000 ns fSetTimeLastLoop=true )
2026-02-02 23:01:33 (39156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-02 23:01:33 (39156): Guest Log: [INFO] Detected branch: prod
2026-02-02 23:01:34 (39156): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-02 23:01:34 (39156): Guest Log: Copying input files
2026-02-02 23:01:37 (39156): Guest Log: Copied input files into RunAtlas.
2026-02-02 23:01:37 (39156): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-02 23:01:37 (39156): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-02 23:01:37 (39156): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-02 23:01:37 (39156): Guest Log: Further information can be found at the LHC@home message board.
2026-02-02 23:02:15 (39156): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-02 23:02:16 (39156): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-02 23:02:16 (39156): Guest Log: 2.6.3.0 1612 0 32040 155787 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-02 23:02:20 (39156): Guest Log: copied the webapp to /var/www
2026-02-02 23:02:20 (39156): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-02 23:02:20 (39156): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-02 23:02:21 (39156): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-02 23:02:21 (39156): Guest Log:  *** Starting ATLAS job. (PandaID=6993056864 taskID=48438127) ***
2026-02-03 00:40:46 (39156): Status Report: Elapsed Time: '6000.000000'
2026-02-03 00:40:46 (39156): Status Report: CPU Time: '11467.875000'
2026-02-03 02:20:51 (39156): Status Report: Elapsed Time: '12000.000000'
2026-02-03 02:20:51 (39156): Status Report: CPU Time: '25913.921875'
2026-02-03 04:00:56 (39156): Status Report: Elapsed Time: '18000.000000'
2026-02-03 04:00:56 (39156): Status Report: CPU Time: '40359.046875'
2026-02-03 05:41:09 (39156): Status Report: Elapsed Time: '24000.000000'
2026-02-03 05:41:09 (39156): Status Report: CPU Time: '54824.281250'
2026-02-03 06:49:54 (39156): Guest Log:  *** Job finished ***
2026-02-03 06:49:54 (39156): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:41,169 | INFO     | end of generic workflow (traces error code: 0)
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:41,169 | INFO     | traces error code: 0
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:41,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,124 | INFO     | PID=6000 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,124 | INFO     | found 0 job(s) in 20 queues
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,125 | CRITICAL | thread 'MainThread' is not alive
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,125 | INFO     | [monitor] control thread has ended
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,354 [wrapper] ==== pilot stdout END ====
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,362 [wrapper] ==== wrapper stdout RESUME ====
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,369 [wrapper] pilotpid: 6000
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,376 [wrapper] Pilot exit status: 0
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,739 [wrapper] pandaids: 6993056864
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,782 [wrapper] cleanup supervisor_pilot 30344 6001
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,789 [wrapper] Test setup, not cleaning
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,797 [wrapper] apfmon messages muted
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,805 [wrapper] ==== wrapper stdout END ====
2026-02-03 06:49:54 (39156): Guest Log: 2026-02-02 20:19:53,812 [wrapper] ==== wrapper stderr END ====
2026-02-03 06:49:54 (39156): Guest Log:  *** Error codes and diagnostics ***
2026-02-03 06:49:54 (39156): Guest Log:     "exeErrorCode": 0,
2026-02-03 06:49:54 (39156): Guest Log:     "exeErrorDiag": "",
2026-02-03 06:49:54 (39156): Guest Log:     "pilotErrorCode": 0,
2026-02-03 06:49:54 (39156): Guest Log:     "pilotErrorDiag": "",
2026-02-03 06:49:54 (39156): Guest Log:  *** Listing of results directory ***
2026-02-03 06:49:54 (39156): Guest Log: total 171648
2026-02-03 06:49:54 (39156): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Feb  2 00:08 pilot3.tar.gz
2026-02-03 06:49:54 (39156): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  2 00:12 runpilot2-wrapper.sh
2026-02-03 06:49:54 (39156): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  2 00:14 queuedata.json
2026-02-03 06:49:54 (39156): Guest Log: -rwxr-xr-x. 1 atlas atlas      8525 Feb  2 12:31 init_data.xml
2026-02-03 06:49:54 (39156): Guest Log: -rwxr-xr-x. 1 atlas atlas    597781 Feb  2 12:31 input.tar.gz
2026-02-03 06:49:54 (39156): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  2 12:31 start_atlas.sh
2026-02-03 06:49:54 (39156): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  2 12:31 EVNT.48438123._000002.pool.root.1 -> /data/./ATLAS.root_0
2026-02-03 06:49:54 (39156): Guest Log: -rw-r--r--. 1 atlas atlas      2635 Feb  2 12:32 pandaJob.out
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas   1008375 Feb  2 12:35 agis_schedconf.cvmfs.json
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas       428 Feb  2 12:35 workernode_map.json
2026-02-03 06:49:54 (39156): Guest Log: drwx------. 5 atlas atlas      4096 Feb  2 12:36 pilot3
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas 163393048 Feb  2 20:18 HITS.48438127._000037.pool.root.1
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas        95 Feb  2 20:18 pilot_heartbeat.json
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas      1028 Feb  2 20:19 memory_monitor_summary.json
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  2 20:19 agis_ddmendpoints.agis.ALL.json
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas    574427 Feb  2 20:19 log.48438127._000037.job.log.tgz.1
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas      6374 Feb  2 20:19 heartbeat.json
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas       814 Feb  2 20:19 pilotlog.txt
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas   3681163 Feb  2 20:19 log.48438127._000037.job.log.1
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas       357 Feb  2 20:19 output.list
2026-02-03 06:49:54 (39156): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  2 20:19 runtime_log
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas   4270080 Feb  2 20:19 result.tar.gz
2026-02-03 06:49:54 (39156): Guest Log: -rw-r--r--. 1 atlas atlas      8746 Feb  2 20:19 runtime_log.err
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas       657 Feb  2 20:19 mcKLDm7iw68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsdRKDmmwhDvm.diag
2026-02-03 06:49:54 (39156): Guest Log: Looking for outputfile HITS.48438127._000037.pool.root.1
2026-02-03 06:49:54 (39156): Guest Log: HITS file was successfully produced
2026-02-03 06:49:54 (39156): Guest Log: -rw-------. 1 atlas atlas 163393048 Feb  2 20:18 /home/atlas/RunAtlas/HITS.48438127._000037.pool.root.1
2026-02-03 06:49:57 (39156): Guest Log: Successfully finished the ATLAS job!
2026-02-03 06:49:57 (39156): Guest Log: Copying the results back to the shared directory!
2026-02-03 06:49:57 (39156): Guest Log:  *** Contents of shared directory: ***
2026-02-03 06:49:57 (39156): Guest Log: total 410752
2026-02-03 06:49:57 (39156): Guest Log: -rwxrwxrwx. 1 root root 252317053 Feb  2 12:30 ATLAS.root_0
2026-02-03 06:49:57 (39156): Guest Log: -rwxrwxrwx. 1 root root 163393048 Feb  2 20:19 HITS.pool.root.1
2026-02-03 06:49:57 (39156): Guest Log: -rwxrwxrwx. 1 root root      8525 Feb  2 12:30 init_data.xml
2026-02-03 06:49:57 (39156): Guest Log: -rwxrwxrwx. 1 root root    597781 Feb  2 05:47 input.tar.gz
2026-02-03 06:49:57 (39156): Guest Log: -rwxrwxrwx. 1 root root   4270080 Feb  2 20:19 result.tar.gz
2026-02-03 06:49:57 (39156): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  2 05:47 start_atlas.sh
2026-02-03 06:49:57 (39156): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-03 06:49:57 (39156): VM Completion File Detected.
2026-02-03 06:49:57 (39156): Powering off VM.
2026-02-03 06:49:58 (39156): Successfully stopped VM.
2026-02-03 06:49:58 (39156): Deregistering VM. (boinc_42e963232de7089f, slot#1)
2026-02-03 06:49:58 (39156): Removing network bandwidth throttle group from VM.
2026-02-03 06:49:58 (39156): Removing VM from VirtualBox.
2026-02-03 06:50:04 (39156): called boinc_finish(0)

</stderr_txt>
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