Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:23 (2583777): wrapper (7.7.26015): starting
19:23:23 (2583777): wrapper: running run_atlas (--nthreads 2)
[2026-02-02 19:23:23] Arguments: --nthreads 2
[2026-02-02 19:23:23] Threads: 2
[2026-02-02 19:23:23] Checking for CVMFS
[2026-02-02 19:23:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 19:23:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 19:23:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 19:23:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 19:23:24] 2.9.2.0 1810822 7357 60728 155796 1 50 21792662 36864001 0 130560 0 2279048 99.980 240847 15074 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 19:23:24] CVMFS is ok
[2026-02-02 19:23:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 19:23:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 19:23:24] Further information can be found at the LHC@home message board.
[2026-02-02 19:23:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 19:23:24] Checking for apptainer binary...
[2026-02-02 19:23:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 19:23:24] Running /usr/bin/apptainer --version
[2026-02-02 19:23:24] apptainer version 1.4.1-1.1
[2026-02-02 19:23:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 19:23:24] atlasA219
[2026-02-02 19:23:24] apptainer works
[2026-02-02 19:23:24] Set ATHENA_PROC_NUMBER=2
[2026-02-02 19:23:24] Set ATHENA_CORE_NUMBER=2
[2026-02-02 19:23:24] Starting ATLAS job with PandaID=6996582295
[2026-02-02 19:23:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 21:31:25]  *** The last 200 lines of the pilot log: ***
[2026-02-02 21:31:25] 2026-02-02 20:30:55,647 | INFO     | update_server=False
[2026-02-02 21:31:25] 2026-02-02 20:30:55,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 21:31:25] 2026-02-02 20:30:55,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 21:31:25] 2026-02-02 20:30:55,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 21:31:25] 2026-02-02 20:30:56,131 | INFO     | all data control threads have been joined
[2026-02-02 21:31:25] 2026-02-02 20:30:56,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 21:31:25] 2026-02-02 20:30:56,272 | INFO     | aborting loop
[2026-02-02 21:31:25] 2026-02-02 20:30:56,653 | INFO     | [job] retrieve thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:56,654 | INFO     | [job] queue monitor thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:56,809 | INFO     | [monitor] cgroup control has ended
[2026-02-02 21:31:25] 2026-02-02 20:30:56,942 | INFO     | [data] copytool_in thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:57,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 21:31:25] 2026-02-02 20:30:57,049 | INFO     | [payload] failed_post thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:57,060 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:57,072 | INFO     | all payload control threads have been joined
[2026-02-02 21:31:25] 2026-02-02 20:30:57,137 | INFO     | [data] control thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:57,278 | INFO     | [job] job monitor thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:57,340 | INFO     | all job control threads have been joined
[2026-02-02 21:31:25] 2026-02-02 20:30:57,493 | INFO     | [payload] validate_post thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:57,890 | INFO     | [data] copytool_out thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:58,020 | INFO     | [job] validate thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:58,078 | INFO     | [payload] control thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:58,104 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:58,138 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:30:58,346 | INFO     | [job] control thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:31:01,051 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:31:06,251 | INFO     | job.realtimelogging is not enabled
[2026-02-02 21:31:25] 2026-02-02 20:31:07,254 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 21:31:25] 2026-02-02 20:31:08,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115518764864)>', '<ExcThread(monitor, started 140114499983104)>']
[2026-02-02 21:31:25] 2026-02-02 20:31:13,377 | INFO     | all workflow threads have been joined
[2026-02-02 21:31:25] 2026-02-02 20:31:13,378 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 21:31:25] 2026-02-02 20:31:13,378 | INFO     | traces error code: 0
[2026-02-02 21:31:25] 2026-02-02 20:31:13,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 21:31:25] 2026-02-02 20:31:25,319 | INFO     | PID=2587802 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 21:31:25] 2026-02-02 20:31:25,319 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 21:31:25] 2026-02-02 20:31:25,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 21:31:25] 2026-02-02 20:31:25,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 21:31:25] 2026-02-02 20:31:25,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 21:31:25] 2026-02-02 20:31:25,319 | CRITICAL | thread 'MainThread' is not alive
[2026-02-02 21:31:25] 2026-02-02 20:31:25,319 | INFO     | [monitor] control thread has ended
[2026-02-02 21:31:25] 2026-02-02 20:31:25,361 [wrapper] ==== pilot stdout END ====
[2026-02-02 21:31:25] 2026-02-02 20:31:25,363 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 21:31:25] 2026-02-02 20:31:25,365 [wrapper] pilotpid: 2587802
[2026-02-02 21:31:25] 2026-02-02 20:31:25,367 [wrapper] Pilot exit status: 0
[2026-02-02 21:31:25] 2026-02-02 20:31:25,374 [wrapper] pandaids: 6996582295
[2026-02-02 21:31:25] 2026-02-02 20:31:25,387 [wrapper] cleanup supervisor_pilot 2597317 2587803
[2026-02-02 21:31:25] 2026-02-02 20:31:25,389 [wrapper] Test setup, not cleaning
[2026-02-02 21:31:25] 2026-02-02 20:31:25,391 [wrapper] apfmon messages muted
[2026-02-02 21:31:25] 2026-02-02 20:31:25,393 [wrapper] ==== wrapper stdout END ====
[2026-02-02 21:31:25] 2026-02-02 20:31:25,395 [wrapper] ==== wrapper stderr END ====
[2026-02-02 21:31:25]  *** Error codes and diagnostics ***
[2026-02-02 21:31:25]     "exeErrorCode": 0,
[2026-02-02 21:31:25]     "exeErrorDiag": "",
[2026-02-02 21:31:25]     "pilotErrorCode": 0,
[2026-02-02 21:31:25]     "pilotErrorDiag": "",
[2026-02-02 21:31:25]  *** Listing of results directory ***
[2026-02-02 21:31:25] total 673104
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc      5111 Feb  2 06:08 queuedata.json
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc    584422 Feb  2 06:08 pilot3.tar.gz
[2026-02-02 21:31:25] -rwx------ 1 boinc boinc     36322 Feb  2 06:09 runpilot2-wrapper.sh
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc       100 Feb  2 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 21:31:25] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 19:23 run_atlas
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc       105 Feb  2 19:23 job.xml
[2026-02-02 21:31:25] -rw-r--r-- 2 boinc boinc 496615666 Feb  2 19:23 EVNT.48317929._000217.pool.root.1
[2026-02-02 21:31:25] drwxrwx--x 2 boinc boinc      4096 Feb  2 19:23 shared
[2026-02-02 21:31:25] -rw-r--r-- 2 boinc boinc    597747 Feb  2 19:23 input.tar.gz
[2026-02-02 21:31:25] -rw-r--r-- 2 boinc boinc     15845 Feb  2 19:23 start_atlas.sh
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc         0 Feb  2 19:23 boinc_setup_complete
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc      6208 Feb  2 19:23 init_data.xml
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc         0 Feb  2 19:23 boinc_lockfile
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc      2512 Feb  2 19:23 pandaJob.out
[2026-02-02 21:31:25] -rw------- 1 boinc boinc   1009774 Feb  2 19:23 agis_schedconf.cvmfs.json
[2026-02-02 21:31:25] -rw------- 1 boinc boinc   1511668 Feb  2 19:23 agis_ddmendpoints.agis.ALL.json
[2026-02-02 21:31:25] -rw------- 1 boinc boinc       421 Feb  2 19:23 workernode_map.json
[2026-02-02 21:31:25] drwx------ 5 boinc boinc      4096 Feb  2 19:23 pilot3
[2026-02-02 21:31:25] -rw------- 1 boinc boinc 185953131 Feb  2 21:30 HITS.48317931._012126.pool.root.1
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc       531 Feb  2 21:30 boinc_task_state.xml
[2026-02-02 21:31:25] -rw------- 1 boinc boinc        95 Feb  2 21:30 pilot_heartbeat.json
[2026-02-02 21:31:25] -rw------- 1 boinc boinc      1012 Feb  2 21:30 memory_monitor_summary.json
[2026-02-02 21:31:25] -rw------- 1 boinc boinc    290283 Feb  2 21:30 log.48317931._012126.job.log.tgz.1
[2026-02-02 21:31:25] -rw------- 1 boinc boinc      6299 Feb  2 21:30 heartbeat.json
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc      8192 Feb  2 21:31 boinc_mmap_file
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc        27 Feb  2 21:31 wrapper_checkpoint.txt
[2026-02-02 21:31:25] -rw------- 1 boinc boinc       817 Feb  2 21:31 pilotlog.txt
[2026-02-02 21:31:25] -rw------- 1 boinc boinc   1092633 Feb  2 21:31 log.48317931._012126.job.log.1
[2026-02-02 21:31:25] -rw------- 1 boinc boinc       357 Feb  2 21:31 output.list
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc       620 Feb  2 21:31 runtime_log
[2026-02-02 21:31:25] -rw------- 1 boinc boinc   1402880 Feb  2 21:31 result.tar.gz
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc      8911 Feb  2 21:31 runtime_log.err
[2026-02-02 21:31:25] -rw------- 1 boinc boinc       661 Feb  2 21:31 newKDmlM168nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmeyRKDmmwpjqm.diag
[2026-02-02 21:31:25] -rw-r--r-- 1 boinc boinc      7605 Feb  2 21:31 stderr.txt
[2026-02-02 21:31:25] HITS file was successfully produced:
[2026-02-02 21:31:25] -rw------- 1 boinc boinc 185953131 Feb  2 21:30 shared/HITS.pool.root.1
[2026-02-02 21:31:25]  *** Contents of shared directory: ***
[2026-02-02 21:31:25] total 668556
[2026-02-02 21:31:25] -rw-r--r-- 2 boinc boinc 496615666 Feb  2 19:23 ATLAS.root_0
[2026-02-02 21:31:25] -rw-r--r-- 2 boinc boinc    597747 Feb  2 19:23 input.tar.gz
[2026-02-02 21:31:25] -rw-r--r-- 2 boinc boinc     15845 Feb  2 19:23 start_atlas.sh
[2026-02-02 21:31:25] -rw------- 1 boinc boinc 185953131 Feb  2 21:30 HITS.pool.root.1
[2026-02-02 21:31:25] -rw------- 1 boinc boinc   1402880 Feb  2 21:31 result.tar.gz
21:31:27 (2583777): run_atlas exited; CPU time 14838.190952
21:31:27 (2583777): called boinc_finish(0)

</stderr_txt>
]]>

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