Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:21:20 (8355): wrapper (7.7.26015): starting
14:21:20 (8355): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 14:21:20] Arguments: --nthreads 8
[2026-02-02 14:21:20] Threads: 8
[2026-02-02 14:21:20] Checking for CVMFS
[2026-02-02 14:21:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 14:21:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 14:21:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 14:21:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 14:21:26] 2.11.2.0 29994 70005 134144 155788 3 93 16006402 25165825 939 130560 0 19925582 99.854 13883249 3168 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-02 14:21:26] CVMFS is ok
[2026-02-02 14:21:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 14:21:26] Checking for apptainer binary...
[2026-02-02 14:21:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 14:21:26] Running /usr/bin/apptainer --version
[2026-02-02 14:21:26] apptainer version 1.3.2-1.el7
[2026-02-02 14:21:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 14:21:33] cg-vwn449.simple-grid.lan
[2026-02-02 14:21:33] apptainer works
[2026-02-02 14:21:33] Set ATHENA_PROC_NUMBER=8
[2026-02-02 14:21:33] Set ATHENA_CORE_NUMBER=8
[2026-02-02 14:21:33] Starting ATLAS job with PandaID=6992966002
[2026-02-02 14:21:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 17:47:49]  *** The last 200 lines of the pilot log: ***
[2026-02-02 17:47:49] 2026-02-02 16:46:43,682 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6992966002/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 17:47:49] 2026-02-02 16:46:43,682 | INFO     | extracted standard info from prmon json
[2026-02-02 17:47:49] 2026-02-02 16:46:43,686 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 17:47:49] 2026-02-02 16:46:43,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 17:47:49] 2026-02-02 16:46:43,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 17:47:49] 2026-02-02 16:46:43,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 17:47:49] 2026-02-02 16:46:43,691 | INFO     | fitting pss+swap vs Time
[2026-02-02 17:47:49] 2026-02-02 16:46:43,692 | INFO     | sum of square deviations: 2518000700.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,694 | INFO     | sum of deviations: -26712513355.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,694 | INFO     | mean x: 1770044672.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,694 | INFO     | mean y: 2528711.7014925373
[2026-02-02 17:47:49] 2026-02-02 16:46:43,694 | INFO     | intersect: 18780260560.52369
[2026-02-02 17:47:49] 2026-02-02 16:46:43,695 | INFO     | chi2: 2.563743181701228
[2026-02-02 17:47:49] 2026-02-02 16:46:43,695 | INFO     | sum of square deviations: 2334722845.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,697 | INFO     | sum of deviations: -12612643101.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,697 | INFO     | mean x: 1770044519.5
[2026-02-02 17:47:49] 2026-02-02 16:46:43,697 | INFO     | mean y: 2540221.1224489794
[2026-02-02 17:47:49] 2026-02-02 16:46:43,697 | INFO     | intersect: 9564677262.418472
[2026-02-02 17:47:49] 2026-02-02 16:46:43,698 | INFO     | chi2: 1.802000114675388
[2026-02-02 17:47:49] 2026-02-02 16:46:43,698 | INFO     | current chi2=1.802000114675388 (change=29.71214404246094 %)
[2026-02-02 17:47:49] 2026-02-02 16:46:43,698 | INFO     | sum of square deviations: 2160561440.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,700 | INFO     | sum of deviations: -11994093463.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,700 | INFO     | mean x: 1770044367.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,700 | INFO     | mean y: 2540762.8586387434
[2026-02-02 17:47:49] 2026-02-02 16:46:43,701 | INFO     | intersect: 9828726298.899065
[2026-02-02 17:47:49] 2026-02-02 16:46:43,701 | INFO     | chi2: 1.8011462767187025
[2026-02-02 17:47:49] 2026-02-02 16:46:43,701 | INFO     | current chi2=1.8011462767187025 (change=0.047382791473305555 %)
[2026-02-02 17:47:49] 2026-02-02 16:46:43,701 | INFO     | right removable region: 190
[2026-02-02 17:47:49] 2026-02-02 16:46:43,702 | INFO     | sum of square deviations: 2334722845.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,708 | INFO     | sum of deviations: -59494257517.00001
[2026-02-02 17:47:49] 2026-02-02 16:46:43,708 | INFO     | mean x: 1770044824.5
[2026-02-02 17:47:49] 2026-02-02 16:46:43,709 | INFO     | mean y: 2555699.275510204
[2026-02-02 17:47:49] 2026-02-02 16:46:43,709 | INFO     | intersect: 45107482320.848915
[2026-02-02 17:47:49] 2026-02-02 16:46:43,709 | INFO     | chi2: 0.9850677184074088
[2026-02-02 17:47:49] 2026-02-02 16:46:43,709 | INFO     | current chi2=0.9850677184074088 (change=61.57697364391446 %)
[2026-02-02 17:47:49] 2026-02-02 16:46:43,710 | INFO     | sum of square deviations: 2160561440.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,711 | INFO     | sum of deviations: -58245282822.000015
[2026-02-02 17:47:49] 2026-02-02 16:46:43,712 | INFO     | mean x: 1770044977.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,712 | INFO     | mean y: 2554555.09947644
[2026-02-02 17:47:49] 2026-02-02 16:46:43,712 | INFO     | intersect: 47720137764.8718
[2026-02-02 17:47:49] 2026-02-02 16:46:43,712 | INFO     | chi2: 0.965112763205077
[2026-02-02 17:47:49] 2026-02-02 16:46:43,713 | INFO     | current chi2=0.965112763205077 (change=2.025744507656148 %)
[2026-02-02 17:47:49] 2026-02-02 16:46:43,713 | INFO     | left removable region: 20
[2026-02-02 17:47:49] 2026-02-02 16:46:43,713 | INFO     | sum of square deviations: 1523386702.5
[2026-02-02 17:47:49] 2026-02-02 16:46:43,714 | INFO     | sum of deviations: -32154490556.0
[2026-02-02 17:47:49] 2026-02-02 16:46:43,715 | INFO     | mean x: 1770044946.5
[2026-02-02 17:47:49] 2026-02-02 16:46:43,715 | INFO     | mean y: 2557926.470588235
[2026-02-02 17:47:49] 2026-02-02 16:46:43,715 | INFO     | intersect: 37363323530.19279
[2026-02-02 17:47:49] 2026-02-02 16:46:43,715 | INFO     | chi2: 0.16105404834914985
[2026-02-02 17:47:49] 2026-02-02 16:46:43,716 | INFO     | current memory leak: -21.11 B/s (using 170 data points, chi2=0.16)
[2026-02-02 17:47:49] 2026-02-02 16:46:43,716 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-02-02 17:47:49] 2026-02-02 16:46:43,716 | INFO     | ..............................
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | . Timing measurements:
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | . get job = 0 s
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | . initial setup = 12 s
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | . payload setup = 12 s
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | . stage-in = 0 s
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | . payload execution = 12243 s
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | . stage-out = 4 s
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | . log creation = 1 s
[2026-02-02 17:47:49] 2026-02-02 16:46:43,717 | INFO     | ..............................
[2026-02-02 17:47:49] 2026-02-02 16:46:44,224 | INFO     | time since job start (12267s) is within the limit (349056.0s)
[2026-02-02 17:47:49] 2026-02-02 16:46:44,376 | INFO     | 
[2026-02-02 17:47:49] 2026-02-02 16:46:44,376 | INFO     | job summary report
[2026-02-02 17:47:49] 2026-02-02 16:46:44,376 | INFO     | --------------------------------------------------
[2026-02-02 17:47:49] 2026-02-02 16:46:44,376 | INFO     | PanDA job id: 6992966002
[2026-02-02 17:47:49] 2026-02-02 16:46:44,376 | INFO     | task id: 48318010
[2026-02-02 17:47:49] 2026-02-02 16:46:44,376 | INFO     | errors: (none)
[2026-02-02 17:47:49] 2026-02-02 16:46:44,376 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 17:47:49] 2026-02-02 16:46:44,377 | INFO     | pilot state: finished 
[2026-02-02 17:47:49] 2026-02-02 16:46:44,377 | INFO     | transexitcode: 0
[2026-02-02 17:47:49] 2026-02-02 16:46:44,377 | INFO     | exeerrorcode: 0
[2026-02-02 17:47:49] 2026-02-02 16:46:44,377 | INFO     | exeerrordiag: 
[2026-02-02 17:47:49] 2026-02-02 16:46:44,377 | INFO     | exitcode: 0
[2026-02-02 17:47:49] 2026-02-02 16:46:44,377 | INFO     | exitmsg: OK
[2026-02-02 17:47:49] 2026-02-02 16:46:44,377 | INFO     | cpuconsumptiontime: 58220 s
[2026-02-02 17:47:49] 2026-02-02 16:46:44,377 | INFO     | nevents: 400
[2026-02-02 17:47:49] 2026-02-02 16:46:44,378 | INFO     | neventsw: 0
[2026-02-02 17:47:49] 2026-02-02 16:46:44,378 | INFO     | pid: 16801
[2026-02-02 17:47:49] 2026-02-02 16:46:44,378 | INFO     | pgrp: 16801
[2026-02-02 17:47:49] 2026-02-02 16:46:44,378 | INFO     | corecount: 8
[2026-02-02 17:47:49] 2026-02-02 16:46:44,378 | INFO     | event service: False
[2026-02-02 17:47:49] 2026-02-02 16:46:44,378 | INFO     | sizes: {0: 2277843, 1: 2278304, 12257: 2308049, 12262: 2317047, 12265: 2317297}
[2026-02-02 17:47:49] 2026-02-02 16:46:44,378 | INFO     | --------------------------------------------------
[2026-02-02 17:47:49] 2026-02-02 16:46:44,378 | INFO     | 
[2026-02-02 17:47:49] 2026-02-02 16:46:44,379 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-02-02 17:47:49] 2026-02-02 16:46:44,996 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,996 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,998 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 17:47:49] 2026-02-02 16:46:44,999 | INFO     | job 6992966002 has completed (purged errors)
[2026-02-02 17:47:49] 2026-02-02 16:46:44,999 | INFO     | overall cleanup function is called
[2026-02-02 17:47:49] 2026-02-02 16:46:45,335 | INFO     | PID=12389 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 17:47:49] 2026-02-02 16:46:45,335 | INFO     | .. there are 2 such processes running
[2026-02-02 17:47:49] 2026-02-02 16:46:46,008 | INFO     | --- collectZombieJob: --- 10, [16801]
[2026-02-02 17:47:49] 2026-02-02 16:46:46,008 | INFO     | zombie collector waiting for pid 16801
[2026-02-02 17:47:49] 2026-02-02 16:46:46,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 17:47:49] 2026-02-02 16:46:46,008 | INFO     | collected zombie processes
[2026-02-02 17:47:49] 2026-02-02 16:46:46,008 | INFO     | will attempt to kill all subprocesses of pid=16801
[2026-02-02 17:47:49] 2026-02-02 16:46:46,088 | INFO     | process IDs to be killed: [16801] (in reverse order)
[2026-02-02 17:47:49] 2026-02-02 16:46:46,575 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 17:47:49] 2026-02-02 16:46:46,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 17:47:49] 2026-02-02 16:46:46,578 | INFO     | did not find any defunct processes belonging to 16801
[2026-02-02 17:47:49] 2026-02-02 16:46:46,580 | INFO     | did not find any defunct processes belonging to 16801
[2026-02-02 17:47:49] 2026-02-02 16:46:46,580 | INFO     | ready for new job
[2026-02-02 17:47:49] 2026-02-02 16:46:46,580 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 17:47:49] 2026-02-02 16:46:46,582 | INFO     | **************************************
[2026-02-02 17:47:49] 2026-02-02 16:46:46,582 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 17:47:49] 2026-02-02 16:46:46,582 | INFO     | **************************************
[2026-02-02 17:47:49] 2026-02-02 16:46:46,582 | INFO     | 
[2026-02-02 17:47:49] 2026-02-02 16:46:46,583 | INFO     | pilot is running in a VM
[2026-02-02 17:47:49] 2026-02-02 16:46:46,583 | INFO     | architecture information:
[2026-02-02 17:47:49] 2026-02-02 16:46:46,589 | INFO     | executing command: cat /etc/os-release
[2026-02-02 17:47:49] 2026-02-02 16:46:46,860 | INFO     | cat /etc/os-release:
[2026-02-02 17:47:49] NAME="CentOS Linux"
[2026-02-02 17:47:49] VERSION="7 (Core)"
[2026-02-02 17:47:49] ID="centos"
[2026-02-02 17:47:49] ID_LIKE="rhel fedora"
[2026-02-02 17:47:49] VERSION_ID="7"
[2026-02-02 17:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 17:47:49] ANSI_COLOR="0;31"
[2026-02-02 17:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 17:47:49] HOME_URL="https://www.centos.org/"
[2026-02-02 17:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 17:47:49] 
[2026-02-02 17:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 17:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 17:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 17:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 17:47:49] 
[2026-02-02 17:47:49] 2026-02-02 16:46:46,860 | INFO     | **************************************
[2026-02-02 17:47:49] 2026-02-02 16:46:47,364 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-02-02 17:47:49] 2026-02-02 16:46:47,620 | INFO     | sufficient remaining disk space (496482910208 B)
[2026-02-02 17:47:49] 2026-02-02 16:46:47,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 17:47:49] 2026-02-02 16:46:47,621 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 17:47:49] 2026-02-02 16:46:47,621 | INFO     | update_server=False
[2026-02-02 17:47:49] 2026-02-02 16:46:47,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 17:47:49] 2026-02-02 16:46:47,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 17:47:49] 2026-02-02 16:46:47,622 | INFO     | aborting loop
[2026-02-02 17:47:49] 2026-02-02 16:46:47,771 | INFO     | all data control threads have been joined
[2026-02-02 17:47:49] 2026-02-02 16:46:48,025 | INFO     | all payload control threads have been joined
[2026-02-02 17:47:49] 2026-02-02 16:46:48,627 | INFO     | [job] retrieve thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:48,628 | INFO     | [job] job monitor thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:48,772 | INFO     | [payload] failed_post thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:48,777 | INFO     | [data] control thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:48,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 17:47:49] 2026-02-02 16:46:48,997 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:49,024 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:49,031 | INFO     | [payload] control thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:49,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 17:47:49] 2026-02-02 16:46:49,324 | INFO     | all job control threads have been joined
[2026-02-02 17:47:49] 2026-02-02 16:46:49,477 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:49,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 17:47:49] 2026-02-02 16:46:49,819 | INFO     | [job] validate thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:49,823 | INFO     | [payload] validate_post thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:49,924 | INFO     | [job] queue monitor thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:50,026 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:50,046 | INFO     | [data] copytool_in thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:50,330 | INFO     | [job] control thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:51,079 | INFO     | [data] copytool_out thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:46:53,693 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 17:47:49] 2026-02-02 16:47:17,465 | INFO     | PID=12389 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 17:47:49] 2026-02-02 16:47:17,465 | INFO     | .. there are 2 such processes running
[2026-02-02 17:47:49] 2026-02-02 16:47:17,466 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 17:47:49] 2026-02-02 16:47:17,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 17:47:49] 2026-02-02 16:47:17,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 17:47:49] 2026-02-02 16:47:38,632 | INFO     | [monitor] cgroup control has ended
[2026-02-02 17:47:49] 2026-02-02 16:47:40,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339644196672)>', '<ExcThread(monitor, started 140338970740480)>']
[2026-02-02 17:47:49] 2026-02-02 16:47:40,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 17:47:49] 2026-02-02 16:47:40,604 | INFO     | [monitor] control thread has ended
[2026-02-02 17:47:49] 2026-02-02 16:47:45,307 | INFO     | all workflow threads have been joined
[2026-02-02 17:47:49] 2026-02-02 16:47:45,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 17:47:49] 2026-02-02 16:47:45,307 | INFO     | traces error code: 0
[2026-02-02 17:47:49] 2026-02-02 16:47:45,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 17:47:49] 2026-02-02 16:47:45,753 [wrapper] ==== pilot stdout END ====
[2026-02-02 17:47:49] 2026-02-02 16:47:45,860 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 17:47:49] 2026-02-02 16:47:45,969 [wrapper] pilotpid: 12389
[2026-02-02 17:47:49] 2026-02-02 16:47:46,091 [wrapper] Pilot exit status: 0
[2026-02-02 17:47:49] 2026-02-02 16:47:46,646 [wrapper] pandaids: 6992966002
[2026-02-02 17:47:49] 2026-02-02 16:47:47,736 [wrapper] cleanup supervisor_pilot  9297 12390
[2026-02-02 17:47:49] 2026-02-02 16:47:47,791 [wrapper] Test setup, not cleaning
[2026-02-02 17:47:49] 2026-02-02 16:47:47,899 [wrapper] apfmon messages muted
[2026-02-02 17:47:49] 2026-02-02 16:47:47,998 [wrapper] ==== wrapper stdout END ====
[2026-02-02 17:47:49] 2026-02-02 16:47:48,116 [wrapper] ==== wrapper stderr END ====
[2026-02-02 17:47:49]  *** Error codes and diagnostics ***
[2026-02-02 17:47:49]     "exeErrorCode": 0,
[2026-02-02 17:47:49]     "exeErrorDiag": "",
[2026-02-02 17:47:49]     "pilotErrorCode": 0,
[2026-02-02 17:47:49]     "pilotErrorDiag": "",
[2026-02-02 17:47:49]  *** Listing of results directory ***
[2026-02-02 17:47:49] total 674080
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc      5111 Feb  2 01:08 queuedata.json
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc    584422 Feb  2 01:08 pilot3.tar.gz
[2026-02-02 17:47:49] -rwx------. 1 boinc boinc     36322 Feb  2 01:09 runpilot2-wrapper.sh
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc       100 Feb  2 14:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 17:47:49] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 14:21 run_atlas
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc       105 Feb  2 14:21 job.xml
[2026-02-02 17:47:49] -rw-r--r--. 2 boinc boinc 502367722 Feb  2 14:21 EVNT.48318008._000160.pool.root.1
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc      6391 Feb  2 14:21 init_data.xml
[2026-02-02 17:47:49] -rw-r--r--. 2 boinc boinc     15845 Feb  2 14:21 start_atlas.sh
[2026-02-02 17:47:49] drwxrwx--x. 2 boinc boinc        68 Feb  2 14:21 shared
[2026-02-02 17:47:49] -rw-r--r--. 2 boinc boinc    597766 Feb  2 14:21 input.tar.gz
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc         0 Feb  2 14:21 boinc_lockfile
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc      2526 Feb  2 14:21 pandaJob.out
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc   1009833 Feb  2 14:22 agis_schedconf.cvmfs.json
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc       415 Feb  2 14:22 workernode_map.json
[2026-02-02 17:47:49] drwx------. 5 boinc boinc      4096 Feb  2 14:22 pilot3
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc 179576811 Feb  2 17:45 HITS.48318010._008543.pool.root.1
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc       531 Feb  2 17:45 boinc_task_state.xml
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc      1019 Feb  2 17:46 memory_monitor_summary.json
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc   1511668 Feb  2 17:46 agis_ddmendpoints.agis.ALL.json
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc    470146 Feb  2 17:46 log.48318010._008543.job.log.tgz.1
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc      6324 Feb  2 17:46 heartbeat.json
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc        95 Feb  2 17:47 pilot_heartbeat.json
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc      4880 Feb  2 17:47 pilotlog.txt
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc   1727403 Feb  2 17:47 log.48318010._008543.job.log.1
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc      8192 Feb  2 17:47 boinc_mmap_file
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc        28 Feb  2 17:47 wrapper_checkpoint.txt
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc       357 Feb  2 17:47 output.list
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc       620 Feb  2 17:47 runtime_log
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc   2211840 Feb  2 17:47 result.tar.gz
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc      8816 Feb  2 17:47 runtime_log.err
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc       654 Feb  2 17:47 hUUNDm9fw68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBVRKDmjJhDQm.diag
[2026-02-02 17:47:49] -rw-r--r--. 1 boinc boinc     20774 Feb  2 17:47 stderr.txt
[2026-02-02 17:47:49] HITS file was successfully produced:
[2026-02-02 17:47:49] -rw-------. 1 boinc boinc 179576811 Feb  2 17:45 shared/HITS.pool.root.1
[2026-02-02 17:47:49]  *** Contents of shared directory: ***
[2026-02-02 17:47:50] total 668724
[2026-02-02 17:47:50] -rw-r--r--. 2 boinc boinc 502367722 Feb  2 14:21 ATLAS.root_0
[2026-02-02 17:47:50] -rw-r--r--. 2 boinc boinc     15845 Feb  2 14:21 start_atlas.sh
[2026-02-02 17:47:50] -rw-r--r--. 2 boinc boinc    597766 Feb  2 14:21 input.tar.gz
[2026-02-02 17:47:50] -rw-------. 1 boinc boinc 179576811 Feb  2 17:45 HITS.pool.root.1
[2026-02-02 17:47:50] -rw-------. 1 boinc boinc   2211840 Feb  2 17:47 result.tar.gz
17:47:51 (8355): run_atlas exited; CPU time 58333.460685
17:47:51 (8355): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN