Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:46 (331400): wrapper (7.7.26015): starting
00:05:46 (331400): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 00:05:46] Arguments: --nthreads 12
[2026-02-02 00:05:46] Threads: 12
[2026-02-02 00:05:46] Checking for CVMFS
[2026-02-02 00:05:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 00:05:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 00:05:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 00:05:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 00:05:47] 2.13.3.0 11416 127481 250396 155774 2 612 22491437 32935936 24728 16776704 0 811263744 99.552 956665177 37958 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-02 00:05:47] CVMFS is ok
[2026-02-02 00:05:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 00:05:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 00:05:47] Further information can be found at the LHC@home message board.
[2026-02-02 00:05:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 00:05:47] Checking for apptainer binary...
[2026-02-02 00:05:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 00:05:47] Running /usr/bin/apptainer --version
[2026-02-02 00:05:47] apptainer version 1.4.5-2.el9
[2026-02-02 00:05:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 00:05:48] c7-2-16.aglt2.org
[2026-02-02 00:05:48] apptainer works
[2026-02-02 00:05:48] Set ATHENA_PROC_NUMBER=12
[2026-02-02 00:05:48] Set ATHENA_CORE_NUMBER=12
[2026-02-02 00:05:48] Starting ATLAS job with PandaID=6993058706
[2026-02-02 00:05:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 07:01:29]  *** The last 200 lines of the pilot log: ***
[2026-02-02 07:01:29] 2026-02-02 12:00:28,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 07:01:29] 2026-02-02 12:00:28,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 07:01:29] 2026-02-02 12:00:28,656 | INFO     | fitting pss+swap vs Time
[2026-02-02 07:01:29] 2026-02-02 12:00:28,656 | INFO     | sum of square deviations: 20905482522.447174
[2026-02-02 07:01:29] 2026-02-02 12:00:28,670 | INFO     | sum of deviations: 256473855530.62656
[2026-02-02 07:01:29] 2026-02-02 12:00:28,670 | INFO     | mean x: 1770021223.036855
[2026-02-02 07:01:29] 2026-02-02 12:00:28,670 | INFO     | mean y: 2612857.9582309583
[2026-02-02 07:01:29] 2026-02-02 12:00:28,670 | INFO     | intersect: -21712464369.07325
[2026-02-02 07:01:29] 2026-02-02 12:00:28,670 | INFO     | chi2: 5.803857110148209
[2026-02-02 07:01:29] 2026-02-02 12:00:28,671 | INFO     | sum of square deviations: 20144440269.94028
[2026-02-02 07:01:29] 2026-02-02 12:00:28,684 | INFO     | sum of deviations: 282437236045.8508
[2026-02-02 07:01:29] 2026-02-02 12:00:28,684 | INFO     | mean x: 1770021070.5373135
[2026-02-02 07:01:29] 2026-02-02 12:00:28,684 | INFO     | mean y: 2618001.1766169155
[2026-02-02 07:01:29] 2026-02-02 12:00:28,684 | INFO     | intersect: -24814147925.621647
[2026-02-02 07:01:29] 2026-02-02 12:00:28,684 | INFO     | chi2: 5.002143304393666
[2026-02-02 07:01:29] 2026-02-02 12:00:28,684 | INFO     | current chi2=5.002143304393666 (change=13.813465606393432 %)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,684 | INFO     | right removable region: 401
[2026-02-02 07:01:29] 2026-02-02 12:00:28,685 | INFO     | sum of square deviations: 20144431119.94028
[2026-02-02 07:01:29] 2026-02-02 12:00:28,690 | INFO     | sum of deviations: 124657176483.56729
[2026-02-02 07:01:29] 2026-02-02 12:00:28,690 | INFO     | mean x: 1770021375.5373135
[2026-02-02 07:01:29] 2026-02-02 12:00:28,690 | INFO     | mean y: 2639247.395522388
[2026-02-02 07:01:29] 2026-02-02 12:00:28,690 | INFO     | intersect: -10950554996.527884
[2026-02-02 07:01:29] 2026-02-02 12:00:28,690 | INFO     | chi2: 2.308545478983462
[2026-02-02 07:01:29] 2026-02-02 12:00:28,690 | INFO     | current chi2=2.308545478983462 (change=60.22394357457724 %)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,691 | INFO     | sum of square deviations: 19402077742.43319
[2026-02-02 07:01:29] 2026-02-02 12:00:28,694 | INFO     | sum of deviations: 60998731958.8186
[2026-02-02 07:01:29] 2026-02-02 12:00:28,694 | INFO     | mean x: 1770021528.0377834
[2026-02-02 07:01:29] 2026-02-02 12:00:28,694 | INFO     | mean y: 2652306.6120906803
[2026-02-02 07:01:29] 2026-02-02 12:00:28,694 | INFO     | intersect: -5562167615.430702
[2026-02-02 07:01:29] 2026-02-02 12:00:28,694 | INFO     | chi2: 1.519799412703439
[2026-02-02 07:01:29] 2026-02-02 12:00:28,694 | INFO     | current chi2=1.519799412703439 (change=34.166364642178806 %)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,695 | INFO     | sum of square deviations: 18678189827.42617
[2026-02-02 07:01:29] 2026-02-02 12:00:28,697 | INFO     | sum of deviations: 13100726210.45406
[2026-02-02 07:01:29] 2026-02-02 12:00:28,698 | INFO     | mean x: 1770021680.5382652
[2026-02-02 07:01:29] 2026-02-02 12:00:28,698 | INFO     | mean y: 2662391.9030612246
[2026-02-02 07:01:29] 2026-02-02 12:00:28,698 | INFO     | intersect: -1238816018.88226
[2026-02-02 07:01:29] 2026-02-02 12:00:28,698 | INFO     | chi2: 1.0856691365826352
[2026-02-02 07:01:29] 2026-02-02 12:00:28,698 | INFO     | current chi2=1.0856691365826352 (change=28.564971962225417 %)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,698 | INFO     | sum of square deviations: 17972534812.418633
[2026-02-02 07:01:29] 2026-02-02 12:00:28,701 | INFO     | sum of deviations: -16425634494.472864
[2026-02-02 07:01:29] 2026-02-02 12:00:28,701 | INFO     | mean x: 1770021833.0387597
[2026-02-02 07:01:29] 2026-02-02 12:00:28,701 | INFO     | mean y: 2668768.7648578812
[2026-02-02 07:01:29] 2026-02-02 12:00:28,701 | INFO     | intersect: 1620344404.4043126
[2026-02-02 07:01:29] 2026-02-02 12:00:28,702 | INFO     | chi2: 0.9129944768131513
[2026-02-02 07:01:29] 2026-02-02 12:00:28,702 | INFO     | current chi2=0.9129944768131513 (change=15.904906379950395 %)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,702 | INFO     | left removable region: 40
[2026-02-02 07:01:29] 2026-02-02 12:00:28,702 | INFO     | sum of square deviations: 14588056684.376694
[2026-02-02 07:01:29] 2026-02-02 12:00:28,705 | INFO     | sum of deviations: 5731404868.6565075
[2026-02-02 07:01:29] 2026-02-02 12:00:28,705 | INFO     | mean x: 1770022260.0415514
[2026-02-02 07:01:29] 2026-02-02 12:00:28,705 | INFO     | mean y: 2676086.756232687
[2026-02-02 07:01:29] 2026-02-02 12:00:28,705 | INFO     | intersect: -692736223.3492786
[2026-02-02 07:01:29] 2026-02-02 12:00:28,705 | INFO     | chi2: 0.017720974053025446
[2026-02-02 07:01:29] 2026-02-02 12:00:28,705 | INFO     | current memory leak: 0.39 B/s (using 361 data points, chi2=0.02)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | could have reported an average CPU frequency of 3226 MHz (17 samples)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | ..............................
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | . Timing measurements:
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | . get job = 0 s
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | . initial setup = 20 s
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | . payload setup = 18 s
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | . stage-in = 0 s
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | . payload execution = 24793 s
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | . stage-out = 2 s
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | . log creation = 0 s
[2026-02-02 07:01:29] 2026-02-02 12:00:28,706 | INFO     | ..............................
[2026-02-02 07:01:29] 2026-02-02 12:00:28,834 | INFO     | 
[2026-02-02 07:01:29] 2026-02-02 12:00:28,834 | INFO     | job summary report
[2026-02-02 07:01:29] 2026-02-02 12:00:28,834 | INFO     | --------------------------------------------------
[2026-02-02 07:01:29] 2026-02-02 12:00:28,834 | INFO     | PanDA job id: 6993058706
[2026-02-02 07:01:29] 2026-02-02 12:00:28,834 | INFO     | task id: 48317931
[2026-02-02 07:01:29] 2026-02-02 12:00:28,834 | INFO     | errors: (none)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | pilot state: finished 
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | transexitcode: 0
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | exeerrorcode: 0
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | exeerrordiag: 
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | exitcode: 0
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | exitmsg: OK
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | cpuconsumptiontime: 32041 s
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | nevents: 400
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | neventsw: 0
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | pid: 341282
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | pgrp: 341282
[2026-02-02 07:01:29] 2026-02-02 12:00:28,835 | INFO     | corecount: 12
[2026-02-02 07:01:29] 2026-02-02 12:00:28,836 | INFO     | event service: False
[2026-02-02 07:01:29] 2026-02-02 12:00:28,836 | INFO     | sizes: {0: 2277726, 1: 2278187, 12: 2278187, 24815: 2313285, 24818: 2322283, 24821: 2322725}
[2026-02-02 07:01:29] 2026-02-02 12:00:28,836 | INFO     | --------------------------------------------------
[2026-02-02 07:01:29] 2026-02-02 12:00:28,836 | INFO     | 
[2026-02-02 07:01:29] 2026-02-02 12:00:28,836 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-02 07:01:29] 2026-02-02 12:00:28,856 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | job 6993058706 has completed (purged errors)
[2026-02-02 07:01:29] 2026-02-02 12:00:28,858 | INFO     | overall cleanup function is called
[2026-02-02 07:01:29] 2026-02-02 12:00:29,867 | INFO     | --- collectZombieJob: --- 10, [341282]
[2026-02-02 07:01:29] 2026-02-02 12:00:29,867 | INFO     | zombie collector waiting for pid 341282
[2026-02-02 07:01:29] 2026-02-02 12:00:29,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 07:01:29] 2026-02-02 12:00:29,867 | INFO     | collected zombie processes
[2026-02-02 07:01:29] 2026-02-02 12:00:29,867 | INFO     | will attempt to kill all subprocesses of pid=341282
[2026-02-02 07:01:29] 2026-02-02 12:00:30,311 | INFO     | process IDs to be killed: [341282] (in reverse order)
[2026-02-02 07:01:29] 2026-02-02 12:00:30,544 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 07:01:29] 2026-02-02 12:00:30,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 07:01:29] 2026-02-02 12:00:30,566 | INFO     | did not find any defunct processes belonging to 341282
[2026-02-02 07:01:29] 2026-02-02 12:00:30,587 | INFO     | did not find any defunct processes belonging to 341282
[2026-02-02 07:01:29] 2026-02-02 12:00:30,587 | INFO     | ready for new job
[2026-02-02 07:01:29] 2026-02-02 12:00:30,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 07:01:29] 2026-02-02 12:00:30,589 | INFO     | **************************************
[2026-02-02 07:01:29] 2026-02-02 12:00:30,589 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 07:01:29] 2026-02-02 12:00:30,589 | INFO     | **************************************
[2026-02-02 07:01:29] 2026-02-02 12:00:30,589 | INFO     | 
[2026-02-02 07:01:29] 2026-02-02 12:00:30,593 | INFO     | architecture information:
[2026-02-02 07:01:29] 2026-02-02 12:00:30,594 | INFO     | executing command: cat /etc/os-release
[2026-02-02 07:01:29] 2026-02-02 12:00:30,625 | INFO     | cat /etc/os-release:
[2026-02-02 07:01:29] NAME="CentOS Linux"
[2026-02-02 07:01:29] VERSION="7 (Core)"
[2026-02-02 07:01:29] ID="centos"
[2026-02-02 07:01:29] ID_LIKE="rhel fedora"
[2026-02-02 07:01:29] VERSION_ID="7"
[2026-02-02 07:01:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 07:01:29] ANSI_COLOR="0;31"
[2026-02-02 07:01:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 07:01:29] HOME_URL="https://www.centos.org/"
[2026-02-02 07:01:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 07:01:29] 
[2026-02-02 07:01:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 07:01:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 07:01:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 07:01:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 07:01:29] 
[2026-02-02 07:01:29] 2026-02-02 12:00:30,625 | INFO     | **************************************
[2026-02-02 07:01:29] 2026-02-02 12:00:31,135 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-02 07:01:29] 2026-02-02 12:00:31,157 | INFO     | sufficient remaining disk space (71304216576 B)
[2026-02-02 07:01:29] 2026-02-02 12:00:31,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 07:01:29] 2026-02-02 12:00:31,158 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 07:01:29] 2026-02-02 12:00:31,158 | INFO     | update_server=False
[2026-02-02 07:01:29] 2026-02-02 12:00:31,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 07:01:29] 2026-02-02 12:00:31,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 07:01:29] 2026-02-02 12:00:31,158 | INFO     | aborting loop
[2026-02-02 07:01:29] 2026-02-02 12:00:31,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 07:01:29] 2026-02-02 12:00:31,470 | INFO     | all data control threads have been joined
[2026-02-02 07:01:29] 2026-02-02 12:00:32,164 | INFO     | [job] retrieve thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:32,174 | INFO     | [job] job monitor thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:32,180 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:32,323 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:32,343 | INFO     | [payload] validate_post thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:32,476 | INFO     | [data] control thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:32,552 | INFO     | all payload control threads have been joined
[2026-02-02 07:01:29] 2026-02-02 12:00:32,683 | INFO     | [data] copytool_in thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:32,721 | INFO     | [job] validate thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:32,781 | INFO     | all job control threads have been joined
[2026-02-02 07:01:29] 2026-02-02 12:00:32,990 | INFO     | [payload] failed_post thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:33,268 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:33,306 | INFO     | [data] copytool_out thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:33,557 | INFO     | [payload] control thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:33,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 07:01:29] 2026-02-02 12:00:33,787 | INFO     | [job] control thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:34,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 07:01:29] 2026-02-02 12:00:34,789 | INFO     | [job] queue monitor thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:38,637 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:00:41,831 | INFO     | job.realtimelogging is not enabled
[2026-02-02 07:01:29] 2026-02-02 12:00:42,837 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 07:01:29] 2026-02-02 12:01:02,128 | INFO     | PID=336591 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 07:01:29] 2026-02-02 12:01:02,128 | INFO     | .. there are 23 such processes running
[2026-02-02 07:01:29] 2026-02-02 12:01:02,129 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 07:01:29] 2026-02-02 12:01:02,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 07:01:29] 2026-02-02 12:01:02,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 07:01:29] 2026-02-02 12:01:22,661 | INFO     | [monitor] cgroup control has ended
[2026-02-02 07:01:29] 2026-02-02 12:01:23,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514920490816)>', '<ExcThread(monitor, started 140514569459456)>']
[2026-02-02 07:01:29] 2026-02-02 12:01:24,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 07:01:29] 2026-02-02 12:01:24,271 | INFO     | [monitor] control thread has ended
[2026-02-02 07:01:29] 2026-02-02 12:01:28,697 | INFO     | all workflow threads have been joined
[2026-02-02 07:01:29] 2026-02-02 12:01:28,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 07:01:29] 2026-02-02 12:01:28,697 | INFO     | traces error code: 0
[2026-02-02 07:01:29] 2026-02-02 12:01:28,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 07:01:29] 2026-02-02 12:01:28,837 [wrapper] ==== pilot stdout END ====
[2026-02-02 07:01:29] 2026-02-02 12:01:28,853 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 07:01:29] 2026-02-02 12:01:28,888 [wrapper] pilotpid: 336591
[2026-02-02 07:01:29] 2026-02-02 12:01:28,911 [wrapper] Pilot exit status: 0
[2026-02-02 07:01:29] 2026-02-02 12:01:28,960 [wrapper] pandaids: 6993058706
[2026-02-02 07:01:29] 2026-02-02 12:01:29,085 [wrapper] cleanup supervisor_pilot 1967979 336592
[2026-02-02 07:01:29] 2026-02-02 12:01:29,088 [wrapper] Test setup, not cleaning
[2026-02-02 07:01:29] 2026-02-02 12:01:29,091 [wrapper] apfmon messages muted
[2026-02-02 07:01:29] 2026-02-02 12:01:29,095 [wrapper] ==== wrapper stdout END ====
[2026-02-02 07:01:29] 2026-02-02 12:01:29,102 [wrapper] ==== wrapper stderr END ====
[2026-02-02 07:01:29]  *** Error codes and diagnostics ***
[2026-02-02 07:01:29]     "exeErrorCode": 0,
[2026-02-02 07:01:29]     "exeErrorDiag": "",
[2026-02-02 07:01:29]     "pilotErrorCode": 0,
[2026-02-02 07:01:29]     "pilotErrorDiag": "",
[2026-02-02 07:01:29]  *** Listing of results directory ***
[2026-02-02 07:01:29] total 677888
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas    584422 Jan 30 02:02 pilot3.tar.gz
[2026-02-02 07:01:29] -rwx------. 1 boincer umatlas     36322 Jan 30 02:06 runpilot2-wrapper.sh
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas      5111 Jan 30 02:07 queuedata.json
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas       100 Feb  2 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 07:01:29] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  2 00:05 run_atlas
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas       105 Feb  2 00:05 job.xml
[2026-02-02 07:01:29] -rw-r--r--. 2 boincer umatlas 497661426 Feb  2 00:05 EVNT.48317929._000083.pool.root.1
[2026-02-02 07:01:29] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 00:05 start_atlas.sh
[2026-02-02 07:01:29] drwxrwx--x. 2 boincer umatlas      4096 Feb  2 00:05 shared
[2026-02-02 07:01:29] -rw-r--r--. 2 boincer umatlas    597757 Feb  2 00:05 input.tar.gz
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas         0 Feb  2 00:05 boinc_lockfile
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas      2510 Feb  2 00:05 pandaJob.out
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas        57 Feb  2 00:05 setup.sh.local
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas   1009823 Feb  2 00:06 agis_schedconf.cvmfs.json
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas       429 Feb  2 00:06 workernode_map.json
[2026-02-02 07:01:29] drwx------. 5 boincer umatlas      4096 Feb  2 00:06 pilot3
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas 185517372 Feb  2 06:59 HITS.48317931._006007.pool.root.1
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas       531 Feb  2 06:59 boinc_task_state.xml
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas      1043 Feb  2 07:00 memory_monitor_summary.json
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas   1511668 Feb  2 07:00 agis_ddmendpoints.agis.ALL.json
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas    617742 Feb  2 07:00 log.48317931._006007.job.log.tgz.1
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas      6339 Feb  2 07:00 heartbeat.json
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas      6946 Feb  2 07:00 init_data.xml
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas        95 Feb  2 07:01 pilot_heartbeat.json
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas        28 Feb  2 07:01 wrapper_checkpoint.txt
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas      8192 Feb  2 07:01 boinc_mmap_file
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas      4891 Feb  2 07:01 pilotlog.txt
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas   2899007 Feb  2 07:01 log.48317931._006007.job.log.1
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas       357 Feb  2 07:01 output.list
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas       620 Feb  2 07:01 runtime_log
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas   3532800 Feb  2 07:01 result.tar.gz
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas      9339 Feb  2 07:01 runtime_log.err
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas       660 Feb  2 07:01 MtcLDmZlx58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmInKKDmHKtLqm.diag
[2026-02-02 07:01:29] -rw-r--r--. 1 boincer umatlas     20965 Feb  2 07:01 stderr.txt
[2026-02-02 07:01:29] HITS file was successfully produced:
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas 185517372 Feb  2 06:59 shared/HITS.pool.root.1
[2026-02-02 07:01:29]  *** Contents of shared directory: ***
[2026-02-02 07:01:29] total 671232
[2026-02-02 07:01:29] -rw-r--r--. 2 boincer umatlas 497661426 Feb  2 00:05 ATLAS.root_0
[2026-02-02 07:01:29] -rw-r--r--. 2 boincer umatlas     15845 Feb  2 00:05 start_atlas.sh
[2026-02-02 07:01:29] -rw-r--r--. 2 boincer umatlas    597757 Feb  2 00:05 input.tar.gz
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas 185517372 Feb  2 06:59 HITS.pool.root.1
[2026-02-02 07:01:29] -rw-------. 1 boincer umatlas   3532800 Feb  2 07:01 result.tar.gz
07:01:31 (331400): run_atlas exited; CPU time 32994.071511
07:01:31 (331400): called boinc_finish(0)

</stderr_txt>
]]>

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