Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:48:08 (492072): wrapper (7.7.26015): starting
21:48:08 (492072): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 21:48:08] Arguments: --nthreads 4
[2026-02-02 21:48:08] Threads: 4
[2026-02-02 21:48:08] Checking for CVMFS
[2026-02-02 21:48:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 21:48:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 21:48:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 21:48:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 21:48:09] 2.9.2.0 3251459 7442 102668 155804 3 50 23328158 36864001 0 130560 0 3559214 99.986 251236 8185 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 21:48:09] CVMFS is ok
[2026-02-02 21:48:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 21:48:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 21:48:09] Further information can be found at the LHC@home message board.
[2026-02-02 21:48:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 21:48:09] Checking for apptainer binary...
[2026-02-02 21:48:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 21:48:09] Running /usr/bin/apptainer --version
[2026-02-02 21:48:09] apptainer version 1.4.1-1.1
[2026-02-02 21:48:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 21:48:09] thA314
[2026-02-02 21:48:09] apptainer works
[2026-02-02 21:48:09] Set ATHENA_PROC_NUMBER=4
[2026-02-02 21:48:09] Set ATHENA_CORE_NUMBER=4
[2026-02-02 21:48:09] Starting ATLAS job with PandaID=6985073052
[2026-02-02 21:48:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 22:59:33]  *** The last 200 lines of the pilot log: ***
[2026-02-02 22:59:33]  guid=54f6ffc3-fb22-485c-8c0d-26c5118d16c0
[2026-02-02 22:59:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 22:59:33]  is_altstaged=None
[2026-02-02 22:59:33]  is_tar=False
[2026-02-02 22:59:33]  lfn=log.48310724._010620.job.log.tgz.1
[2026-02-02 22:59:33]  mtime=0
[2026-02-02 22:59:33]  protocol_id=None
[2026-02-02 22:59:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 22:59:33]  replicas=None
[2026-02-02 22:59:33]  scope=mc23_13p6TeV
[2026-02-02 22:59:33]  status=None
[2026-02-02 22:59:33]  status_code=0
[2026-02-02 22:59:33]  storage_token=
[2026-02-02 22:59:33]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6985073052/log.48310724._010620.job.log.tgz.1
[2026-02-02 22:59:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/72/log.48310724._010620.job.log.tgz.1
[2026-02-02 22:59:33]  workdir=None
[2026-02-02 22:59:33] ]
[2026-02-02 22:59:33] 2026-02-02 21:58:36,016 | INFO     | transferring file log.48310724._010620.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6985073052/log.48310724._010620.job.log.tgz.1 to /local/data/boinc/
[2026-02-02 22:59:33] 2026-02-02 21:58:36,016 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6985073052/log.48310724._010620.job.log.tgz.1 /local/data/boinc/slots/0/log.48310724._0106
[2026-02-02 22:59:33] 2026-02-02 21:58:36,034 | INFO     | adding to output.list: log.48310724._010620.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/72/log.48310724._010620.job.log.tg
[2026-02-02 22:59:33] 2026-02-02 21:58:36,035 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 22:59:33] 2026-02-02 21:58:36,035 | INFO     | summary of transferred files:
[2026-02-02 22:59:33] 2026-02-02 21:58:36,035 | INFO     |  -- lfn=log.48310724._010620.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 22:59:33] 2026-02-02 21:58:36,035 | INFO     | stage-out finished correctly
[2026-02-02 22:59:33] 2026-02-02 21:58:36,600 | INFO     | time since job start (4214s) is within the limit (349056.0s)
[2026-02-02 22:59:33] 2026-02-02 21:58:38,606 | INFO     | time since job start (4216s) is within the limit (349056.0s)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,365 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 22:59:33] 2026-02-02 21:58:39,401 | INFO     | job 6985073052 has state=finished
[2026-02-02 22:59:33] 2026-02-02 21:58:39,402 | INFO     | preparing for final server update for job 6985073052 in state='finished'
[2026-02-02 22:59:33] 2026-02-02 21:58:39,402 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6985073052/jobReport.json
[2026-02-02 22:59:33] 2026-02-02 21:58:39,403 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-02 22:59:33] 2026-02-02 21:58:39,403 | INFO     | this job has now completed (state=finished)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,403 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,403 | INFO     | log transfer has been attempted: DONE
[2026-02-02 22:59:33] 2026-02-02 21:58:39,403 | INFO     | job 6985073052 has finished - writing final server update
[2026-02-02 22:59:33] 2026-02-02 21:58:39,404 | INFO     | total number of processed events: 400 (read)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,405 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6985073052/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,405 | INFO     | extracted standard info from prmon json
[2026-02-02 22:59:33] 2026-02-02 21:58:39,405 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 22:59:33] 2026-02-02 21:58:39,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 22:59:33] 2026-02-02 21:58:39,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 22:59:33] 2026-02-02 21:58:39,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 22:59:33] 2026-02-02 21:58:39,406 | INFO     | fitting pss+swap vs Time
[2026-02-02 22:59:33] 2026-02-02 21:58:39,406 | INFO     | sum of square deviations: 73882315.5
[2026-02-02 22:59:33] 2026-02-02 21:58:39,406 | INFO     | sum of deviations: -626077403.9999999
[2026-02-02 22:59:33] 2026-02-02 21:58:39,406 | INFO     | mean x: 1770067487.5
[2026-02-02 22:59:33] 2026-02-02 21:58:39,406 | INFO     | mean y: 2402700.35483871
[2026-02-02 22:59:33] 2026-02-02 21:58:39,406 | INFO     | intersect: 15001922544.569822
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | chi2: 0.04679436599326974
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | current memory leak: -8.47 B/s (using 62 data points, chi2=0.05)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | could have reported an average CPU frequency of 3655 MHz (6 samples)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | ..............................
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | . Timing measurements:
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | . get job = 0 s
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | . initial setup = 4 s
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | . payload setup = 4 s
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | . stage-in = 0 s
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | . payload execution = 4193 s
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | . stage-out = 0 s
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | . log creation = 0 s
[2026-02-02 22:59:33] 2026-02-02 21:58:39,407 | INFO     | ..............................
[2026-02-02 22:59:33] 2026-02-02 21:58:39,441 | INFO     | 
[2026-02-02 22:59:33] 2026-02-02 21:58:39,441 | INFO     | job summary report
[2026-02-02 22:59:33] 2026-02-02 21:58:39,441 | INFO     | --------------------------------------------------
[2026-02-02 22:59:33] 2026-02-02 21:58:39,441 | INFO     | PanDA job id: 6985073052
[2026-02-02 22:59:33] 2026-02-02 21:58:39,441 | INFO     | task id: 48310724
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | errors: (none)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | pilot state: finished 
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | transexitcode: 0
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | exeerrorcode: 0
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | exeerrordiag: 
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | exitcode: 0
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | exitmsg: OK
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | cpuconsumptiontime: 15798 s
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | nevents: 400
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | neventsw: 0
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | pid: 500704
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | pgrp: 500704
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | corecount: 4
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | event service: False
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | sizes: {0: 2278031, 1: 2278237, 11: 2278265, 4201: 2304367, 4203: 2313371, 4206: 2313749}
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | --------------------------------------------------
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | 
[2026-02-02 22:59:33] 2026-02-02 21:58:39,442 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | job 6985073052 has completed (purged errors)
[2026-02-02 22:59:33] 2026-02-02 21:58:39,462 | INFO     | overall cleanup function is called
[2026-02-02 22:59:33] 2026-02-02 21:58:40,469 | INFO     | --- collectZombieJob: --- 10, [500704]
[2026-02-02 22:59:33] 2026-02-02 21:58:40,470 | INFO     | zombie collector waiting for pid 500704
[2026-02-02 22:59:33] 2026-02-02 21:58:40,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 22:59:33] 2026-02-02 21:58:40,470 | INFO     | collected zombie processes
[2026-02-02 22:59:33] 2026-02-02 21:58:40,470 | INFO     | will attempt to kill all subprocesses of pid=500704
[2026-02-02 22:59:33] 2026-02-02 21:58:40,516 | INFO     | process IDs to be killed: [500704] (in reverse order)
[2026-02-02 22:59:33] 2026-02-02 21:58:40,552 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 22:59:33] 2026-02-02 21:58:40,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 22:59:33] 2026-02-02 21:58:40,554 | INFO     | did not find any defunct processes belonging to 500704
[2026-02-02 22:59:33] 2026-02-02 21:58:40,555 | INFO     | did not find any defunct processes belonging to 500704
[2026-02-02 22:59:33] 2026-02-02 21:58:40,556 | INFO     | ready for new job
[2026-02-02 22:59:33] 2026-02-02 21:58:40,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 22:59:33] 2026-02-02 21:58:40,556 | INFO     | **************************************
[2026-02-02 22:59:33] 2026-02-02 21:58:40,556 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 22:59:33] 2026-02-02 21:58:40,556 | INFO     | **************************************
[2026-02-02 22:59:33] 2026-02-02 21:58:40,556 | INFO     | 
[2026-02-02 22:59:33] 2026-02-02 21:58:40,557 | INFO     | architecture information:
[2026-02-02 22:59:33] 2026-02-02 21:58:40,557 | INFO     | executing command: cat /etc/os-release
[2026-02-02 22:59:33] 2026-02-02 21:58:40,571 | INFO     | cat /etc/os-release:
[2026-02-02 22:59:33] NAME="CentOS Linux"
[2026-02-02 22:59:33] VERSION="7 (Core)"
[2026-02-02 22:59:33] ID="centos"
[2026-02-02 22:59:33] ID_LIKE="rhel fedora"
[2026-02-02 22:59:33] VERSION_ID="7"
[2026-02-02 22:59:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 22:59:33] ANSI_COLOR="0;31"
[2026-02-02 22:59:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 22:59:33] HOME_URL="https://www.centos.org/"
[2026-02-02 22:59:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 22:59:33] 
[2026-02-02 22:59:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 22:59:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 22:59:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 22:59:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 22:59:33] 
[2026-02-02 22:59:33] 2026-02-02 21:58:40,572 | INFO     | **************************************
[2026-02-02 22:59:33] 2026-02-02 21:58:40,884 | WARNING  | process 500704 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 22:59:33] 2026-02-02 21:58:40,919 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 22:59:33] 2026-02-02 21:58:40,962 | INFO     | number of running child processes to parent process 500704: 1
[2026-02-02 22:59:33] 2026-02-02 21:58:40,963 | INFO     | maximum number of monitored processes: 6
[2026-02-02 22:59:33] 2026-02-02 21:58:40,963 | INFO     | aborting job monitoring since job object (job id=6985073052) has expired
[2026-02-02 22:59:33] 2026-02-02 21:58:41,075 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-02 22:59:33] 2026-02-02 21:58:41,092 | INFO     | sufficient remaining disk space (230915309568 B)
[2026-02-02 22:59:33] 2026-02-02 21:58:41,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 22:59:33] 2026-02-02 21:58:41,093 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 22:59:33] 2026-02-02 21:58:41,093 | INFO     | update_server=False
[2026-02-02 22:59:33] 2026-02-02 21:58:41,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 22:59:33] 2026-02-02 21:58:41,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 22:59:33] 2026-02-02 21:58:41,093 | INFO     | will abort loop
[2026-02-02 22:59:33] 2026-02-02 21:58:41,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 22:59:33] 2026-02-02 21:58:41,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 22:59:33] 2026-02-02 21:58:41,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 22:59:33] 2026-02-02 21:58:41,934 | INFO     | all data control threads have been joined
[2026-02-02 22:59:33] 2026-02-02 21:58:42,098 | INFO     | [job] retrieve thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:42,099 | INFO     | [job] job monitor thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:42,099 | INFO     | [job] queue monitor thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:42,189 | INFO     | all payload control threads have been joined
[2026-02-02 22:59:33] 2026-02-02 21:58:42,590 | INFO     | [payload] failed_post thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:42,626 | INFO     | all job control threads have been joined
[2026-02-02 22:59:33] 2026-02-02 21:58:42,939 | INFO     | [data] control thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,031 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,126 | INFO     | [job] validate thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,126 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,194 | INFO     | [payload] control thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,231 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,413 | INFO     | [data] copytool_in thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,494 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,568 | INFO     | [payload] validate_post thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,588 | INFO     | [data] copytool_out thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:43,631 | INFO     | [job] control thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:58:45,100 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 22:59:33] 2026-02-02 21:59:11,722 | INFO     | PID=496183 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 22:59:33] 2026-02-02 21:59:11,722 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 22:59:33] 2026-02-02 21:59:11,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 22:59:33] 2026-02-02 21:59:11,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 22:59:33] 2026-02-02 21:59:27,092 | INFO     | [monitor] cgroup control has ended
[2026-02-02 22:59:33] 2026-02-02 21:59:28,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288298403648)>', '<ExcThread(monitor, started 140287556957952)>']
[2026-02-02 22:59:33] 2026-02-02 21:59:28,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 22:59:33] 2026-02-02 21:59:28,812 | INFO     | [monitor] control thread has ended
[2026-02-02 22:59:33] 2026-02-02 21:59:33,123 | INFO     | all workflow threads have been joined
[2026-02-02 22:59:33] 2026-02-02 21:59:33,124 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 22:59:33] 2026-02-02 21:59:33,124 | INFO     | traces error code: 0
[2026-02-02 22:59:33] 2026-02-02 21:59:33,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 22:59:33] 2026-02-02 21:59:33,205 [wrapper] ==== pilot stdout END ====
[2026-02-02 22:59:33] 2026-02-02 21:59:33,209 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 22:59:33] 2026-02-02 21:59:33,213 [wrapper] pilotpid: 496183
[2026-02-02 22:59:33] 2026-02-02 21:59:33,217 [wrapper] Pilot exit status: 0
[2026-02-02 22:59:33] 2026-02-02 21:59:33,229 [wrapper] pandaids: 6985073052
[2026-02-02 22:59:33] 2026-02-02 21:59:33,253 [wrapper] cleanup supervisor_pilot  506842 496184
[2026-02-02 22:59:33] 2026-02-02 21:59:33,258 [wrapper] Test setup, not cleaning
[2026-02-02 22:59:33] 2026-02-02 21:59:33,262 [wrapper] apfmon messages muted
[2026-02-02 22:59:33] 2026-02-02 21:59:33,265 [wrapper] ==== wrapper stdout END ====
[2026-02-02 22:59:33] 2026-02-02 21:59:33,269 [wrapper] ==== wrapper stderr END ====
[2026-02-02 22:59:33]  *** Error codes and diagnostics ***
[2026-02-02 22:59:33]     "exeErrorCode": 0,
[2026-02-02 22:59:33]     "exeErrorDiag": "",
[2026-02-02 22:59:33]     "pilotErrorCode": 0,
[2026-02-02 22:59:33]     "pilotErrorDiag": "",
[2026-02-02 22:59:33]  *** Listing of results directory ***
[2026-02-02 22:59:33] total 672744
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc    584422 Jan 30 02:19 pilot3.tar.gz
[2026-02-02 22:59:33] -rwx------ 1 boinc boinc     36322 Jan 30 02:23 runpilot2-wrapper.sh
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc      5111 Jan 30 02:26 queuedata.json
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc       100 Feb  2 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 22:59:33] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 21:48 run_atlas
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc       105 Feb  2 21:48 job.xml
[2026-02-02 22:59:33] -rw-r--r-- 2 boinc boinc 499077963 Feb  2 21:48 EVNT.48310721._000126.pool.root.1
[2026-02-02 22:59:33] -rw-r--r-- 2 boinc boinc    597770 Feb  2 21:48 input.tar.gz
[2026-02-02 22:59:33] -rw-r--r-- 2 boinc boinc     15845 Feb  2 21:48 start_atlas.sh
[2026-02-02 22:59:33] drwxrwx--x 2 boinc boinc      4096 Feb  2 21:48 shared
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc         0 Feb  2 21:48 boinc_setup_complete
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc      6376 Feb  2 21:48 init_data.xml
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc         0 Feb  2 21:48 boinc_lockfile
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc      2534 Feb  2 21:48 pandaJob.out
[2026-02-02 22:59:33] -rw------- 1 boinc boinc   1009316 Feb  2 21:48 agis_schedconf.cvmfs.json
[2026-02-02 22:59:33] -rw------- 1 boinc boinc   1511668 Feb  2 21:48 agis_ddmendpoints.agis.ALL.json
[2026-02-02 22:59:33] -rw------- 1 boinc boinc       427 Feb  2 21:48 workernode_map.json
[2026-02-02 22:59:33] drwx------ 5 boinc boinc      4096 Feb  2 21:48 pilot3
[2026-02-02 22:59:33] -rw------- 1 boinc boinc 184061960 Feb  2 22:58 HITS.48310724._010620.pool.root.1
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc       530 Feb  2 22:58 boinc_task_state.xml
[2026-02-02 22:59:33] -rw------- 1 boinc boinc      1023 Feb  2 22:58 memory_monitor_summary.json
[2026-02-02 22:59:33] -rw------- 1 boinc boinc    281130 Feb  2 22:58 log.48310724._010620.job.log.tgz.1
[2026-02-02 22:59:33] -rw------- 1 boinc boinc      6311 Feb  2 22:58 heartbeat.json
[2026-02-02 22:59:33] -rw------- 1 boinc boinc        95 Feb  2 22:59 pilot_heartbeat.json
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc      8192 Feb  2 22:59 boinc_mmap_file
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc        27 Feb  2 22:59 wrapper_checkpoint.txt
[2026-02-02 22:59:33] -rw------- 1 boinc boinc      5269 Feb  2 22:59 pilotlog.txt
[2026-02-02 22:59:33] -rw------- 1 boinc boinc    624888 Feb  2 22:59 log.48310724._010620.job.log.1
[2026-02-02 22:59:33] -rw------- 1 boinc boinc       357 Feb  2 22:59 output.list
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc       620 Feb  2 22:59 runtime_log
[2026-02-02 22:59:33] -rw------- 1 boinc boinc    921600 Feb  2 22:59 result.tar.gz
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc      8896 Feb  2 22:59 runtime_log.err
[2026-02-02 22:59:33] -rw------- 1 boinc boinc       657 Feb  2 22:59 7UzNDmGPs58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjCKKDmFGM6Gn.diag
[2026-02-02 22:59:33] -rw-r--r-- 1 boinc boinc     21391 Feb  2 22:59 stderr.txt
[2026-02-02 22:59:33] HITS file was successfully produced:
[2026-02-02 22:59:33] -rw------- 1 boinc boinc 184061960 Feb  2 22:58 shared/HITS.pool.root.1
[2026-02-02 22:59:33]  *** Contents of shared directory: ***
[2026-02-02 22:59:33] total 668640
[2026-02-02 22:59:33] -rw-r--r-- 2 boinc boinc 499077963 Feb  2 21:48 ATLAS.root_0
[2026-02-02 22:59:33] -rw-r--r-- 2 boinc boinc    597770 Feb  2 21:48 input.tar.gz
[2026-02-02 22:59:33] -rw-r--r-- 2 boinc boinc     15845 Feb  2 21:48 start_atlas.sh
[2026-02-02 22:59:33] -rw------- 1 boinc boinc 184061960 Feb  2 22:58 HITS.pool.root.1
[2026-02-02 22:59:33] -rw------- 1 boinc boinc    921600 Feb  2 22:59 result.tar.gz
22:59:34 (492072): run_atlas exited; CPU time 15818.783252
22:59:34 (492072): called boinc_finish(0)

</stderr_txt>
]]>

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