Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:55:31 (918019): wrapper (7.7.26015): starting
06:55:31 (918019): wrapper: running run_atlas (--nthreads 6)
[2026-02-03 06:55:31] Arguments: --nthreads 6
[2026-02-03 06:55:31] Threads: 6
[2026-02-03 06:55:31] Checking for CVMFS
[2026-02-03 06:55:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 06:55:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 06:55:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 06:55:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 06:55:36] 2.13.3.0 890209 201 52160 155806 0 50 41564084 52428800 0 130560 0 90709 99.960 12447 177 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-03 06:55:36] CVMFS is ok
[2026-02-03 06:55:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 06:55:36] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-03 06:55:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-03 06:55:36] Further information can be found at the LHC@home message board.
[2026-02-03 06:55:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 06:55:36] Checking for apptainer binary...
[2026-02-03 06:55:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 06:55:36] Running /usr/bin/apptainer --version
[2026-02-03 06:55:36] apptainer version 1.4.5-2.el9
[2026-02-03 06:55:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 06:55:36] Atto003
[2026-02-03 06:55:36] apptainer works
[2026-02-03 06:55:36] Set ATHENA_PROC_NUMBER=6
[2026-02-03 06:55:36] Set ATHENA_CORE_NUMBER=6
[2026-02-03 06:55:36] Starting ATLAS job with PandaID=6992590112
[2026-02-03 06:55:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 08:23:38]  *** The last 200 lines of the pilot log: ***
[2026-02-03 08:23:38]  guid=ce48a495-f31f-49c8-aca1-bfc8344c93b6
[2026-02-03 08:23:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-03 08:23:38]  is_altstaged=None
[2026-02-03 08:23:38]  is_tar=False
[2026-02-03 08:23:38]  lfn=log.48310749._003664.job.log.tgz.1
[2026-02-03 08:23:38]  mtime=0
[2026-02-03 08:23:38]  protocol_id=None
[2026-02-03 08:23:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-03 08:23:38]  replicas=None
[2026-02-03 08:23:38]  scope=mc23_13p6TeV
[2026-02-03 08:23:38]  status=None
[2026-02-03 08:23:38]  status_code=0
[2026-02-03 08:23:38]  storage_token=
[2026-02-03 08:23:38]  surl=/var/lib/boinc/slots/7/PanDA_Pilot-6992590112/log.48310749._003664.job.log.tgz.1
[2026-02-03 08:23:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/3f/log.48310749._003664.job.log.tgz.1
[2026-02-03 08:23:38]  workdir=None
[2026-02-03 08:23:38] ]
[2026-02-03 08:23:38] 2026-02-02 23:23:01,637 | INFO     | transferring file log.48310749._003664.job.log.tgz.1 from /var/lib/boinc/slots/7/PanDA_Pilot-6992590112/log.48310749._003664.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-03 08:23:38] 2026-02-02 23:23:01,637 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/7/PanDA_Pilot-6992590112/log.48310749._003664.job.log.tgz.1 /var/lib/boinc/slots/7/log.48310749._003664.job
[2026-02-03 08:23:38] 2026-02-02 23:23:01,647 | INFO     | adding to output.list: log.48310749._003664.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/3f/log.48310749._003664.job.log.tg
[2026-02-03 08:23:38] 2026-02-02 23:23:01,648 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-03 08:23:38] 2026-02-02 23:23:01,648 | INFO     | summary of transferred files:
[2026-02-03 08:23:38] 2026-02-02 23:23:01,648 | INFO     |  -- lfn=log.48310749._003664.job.log.tgz.1, status_code=0, status=transferred
[2026-02-03 08:23:38] 2026-02-02 23:23:01,648 | INFO     | stage-out finished correctly
[2026-02-03 08:23:38] 2026-02-02 23:23:03,118 | INFO     | time since job start (5217s) is within the limit (349056.0s)
[2026-02-03 08:23:38] 2026-02-02 23:23:03,825 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-03 08:23:38] 2026-02-02 23:23:04,868 | INFO     | job 6992590112 has state=finished
[2026-02-03 08:23:38] 2026-02-02 23:23:04,868 | INFO     | preparing for final server update for job 6992590112 in state='finished'
[2026-02-03 08:23:38] 2026-02-02 23:23:05,124 | INFO     | time since job start (5219s) is within the limit (349056.0s)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,769 | WARNING  | process 926787 can no longer be monitored (due to stat problems) - aborting
[2026-02-03 08:23:38] 2026-02-02 23:23:05,769 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6992590112/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,828 | INFO     | number of running child processes to parent process 926787: 1
[2026-02-03 08:23:38] 2026-02-02 23:23:05,829 | INFO     | maximum number of monitored processes: 6
[2026-02-03 08:23:38] 2026-02-02 23:23:05,857 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,857 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-6992590112/jobReport.json
[2026-02-03 08:23:38] 2026-02-02 23:23:05,859 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-02-03 08:23:38] 2026-02-02 23:23:05,859 | INFO     | this job has now completed (state=finished)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,859 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,859 | INFO     | log transfer has been attempted: DONE
[2026-02-03 08:23:38] 2026-02-02 23:23:05,859 | INFO     | job 6992590112 has finished - writing final server update
[2026-02-03 08:23:38] 2026-02-02 23:23:05,859 | INFO     | total number of processed events: 400 (read)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,862 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6992590112/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,862 | INFO     | extracted standard info from prmon json
[2026-02-03 08:23:38] 2026-02-02 23:23:05,862 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 08:23:38] 2026-02-02 23:23:05,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 08:23:38] 2026-02-02 23:23:05,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 08:23:38] 2026-02-02 23:23:05,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 08:23:38] 2026-02-02 23:23:05,864 | INFO     | fitting pss+swap vs Time
[2026-02-03 08:23:38] 2026-02-02 23:23:05,864 | INFO     | sum of square deviations: 152858680.0
[2026-02-03 08:23:38] 2026-02-02 23:23:05,864 | INFO     | sum of deviations: -12804751499.0
[2026-02-03 08:23:38] 2026-02-02 23:23:05,864 | INFO     | mean x: 1770072071.0
[2026-02-03 08:23:38] 2026-02-02 23:23:05,864 | INFO     | mean y: 2570828.5569620254
[2026-02-03 08:23:38] 2026-02-02 23:23:05,864 | INFO     | intersect: 148278959218.63913
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | chi2: 0.14426515682408256
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | current memory leak: -83.77 B/s (using 79 data points, chi2=0.14)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | could have reported an average CPU frequency of 3699 MHz (6 samples)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | ..............................
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | . Timing measurements:
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | . get job = 0 s
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | . initial setup = 10 s
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | . payload setup = 5 s
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | . stage-in = 0 s
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | . payload execution = 5194 s
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | . stage-out = 0 s
[2026-02-03 08:23:38] 2026-02-02 23:23:05,865 | INFO     | . log creation = 0 s
[2026-02-03 08:23:38] 2026-02-02 23:23:05,866 | INFO     | ..............................
[2026-02-03 08:23:38] 2026-02-02 23:23:05,930 | INFO     | 
[2026-02-03 08:23:38] 2026-02-02 23:23:05,930 | INFO     | job summary report
[2026-02-03 08:23:38] 2026-02-02 23:23:05,930 | INFO     | --------------------------------------------------
[2026-02-03 08:23:38] 2026-02-02 23:23:05,930 | INFO     | PanDA job id: 6992590112
[2026-02-03 08:23:38] 2026-02-02 23:23:05,930 | INFO     | task id: 48310749
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | errors: (none)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | pilot state: finished 
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | transexitcode: 0
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | exeerrorcode: 0
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | exeerrordiag: 
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | exitcode: 0
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | exitmsg: OK
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | cpuconsumptiontime: 29432 s
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | nevents: 400
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | neventsw: 0
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | pid: 926787
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | pgrp: 926787
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | corecount: 6
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | event service: False
[2026-02-03 08:23:38] 2026-02-02 23:23:05,931 | INFO     | sizes: {0: 2278222, 11: 2278222, 5203: 2304759, 5204: 2313757, 5206: 2313813, 5208: 2314007}
[2026-02-03 08:23:38] 2026-02-02 23:23:05,932 | INFO     | --------------------------------------------------
[2026-02-03 08:23:38] 2026-02-02 23:23:05,932 | INFO     | 
[2026-02-03 08:23:38] 2026-02-02 23:23:05,932 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | job 6992590112 has completed (purged errors)
[2026-02-03 08:23:38] 2026-02-02 23:23:05,945 | INFO     | overall cleanup function is called
[2026-02-03 08:23:38] 2026-02-02 23:23:06,951 | INFO     | --- collectZombieJob: --- 10, [926787]
[2026-02-03 08:23:38] 2026-02-02 23:23:06,951 | INFO     | zombie collector waiting for pid 926787
[2026-02-03 08:23:38] 2026-02-02 23:23:06,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 08:23:38] 2026-02-02 23:23:06,951 | INFO     | collected zombie processes
[2026-02-03 08:23:38] 2026-02-02 23:23:06,951 | INFO     | will attempt to kill all subprocesses of pid=926787
[2026-02-03 08:23:38] 2026-02-02 23:23:07,013 | INFO     | process IDs to be killed: [926787] (in reverse order)
[2026-02-03 08:23:38] 2026-02-02 23:23:07,038 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 08:23:38] 2026-02-02 23:23:07,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 08:23:38] 2026-02-02 23:23:07,040 | INFO     | did not find any defunct processes belonging to 926787
[2026-02-03 08:23:38] 2026-02-02 23:23:07,042 | INFO     | did not find any defunct processes belonging to 926787
[2026-02-03 08:23:38] 2026-02-02 23:23:07,042 | INFO     | ready for new job
[2026-02-03 08:23:38] 2026-02-02 23:23:07,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 08:23:38] 2026-02-02 23:23:07,043 | INFO     | **************************************
[2026-02-03 08:23:38] 2026-02-02 23:23:07,043 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 08:23:38] 2026-02-02 23:23:07,043 | INFO     | **************************************
[2026-02-03 08:23:38] 2026-02-02 23:23:07,043 | INFO     | 
[2026-02-03 08:23:38] 2026-02-02 23:23:07,044 | INFO     | architecture information:
[2026-02-03 08:23:38] 2026-02-02 23:23:07,044 | INFO     | executing command: cat /etc/os-release
[2026-02-03 08:23:38] 2026-02-02 23:23:07,053 | INFO     | cat /etc/os-release:
[2026-02-03 08:23:38] NAME="CentOS Linux"
[2026-02-03 08:23:38] VERSION="7 (Core)"
[2026-02-03 08:23:38] ID="centos"
[2026-02-03 08:23:38] ID_LIKE="rhel fedora"
[2026-02-03 08:23:38] VERSION_ID="7"
[2026-02-03 08:23:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 08:23:38] ANSI_COLOR="0;31"
[2026-02-03 08:23:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 08:23:38] HOME_URL="https://www.centos.org/"
[2026-02-03 08:23:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 08:23:38] 
[2026-02-03 08:23:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 08:23:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 08:23:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 08:23:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 08:23:38] 
[2026-02-03 08:23:38] 2026-02-02 23:23:07,053 | INFO     | **************************************
[2026-02-03 08:23:38] 2026-02-02 23:23:07,555 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-03 08:23:38] 2026-02-02 23:23:07,562 | INFO     | sufficient remaining disk space (101521031168 B)
[2026-02-03 08:23:38] 2026-02-02 23:23:07,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 08:23:38] 2026-02-02 23:23:07,563 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 08:23:38] 2026-02-02 23:23:07,563 | INFO     | update_server=False
[2026-02-03 08:23:38] 2026-02-02 23:23:07,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 08:23:38] 2026-02-02 23:23:07,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 08:23:38] 2026-02-02 23:23:07,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 08:23:38] 2026-02-02 23:23:07,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 08:23:38] 2026-02-02 23:23:07,563 | INFO     | aborting loop
[2026-02-03 08:23:38] 2026-02-02 23:23:08,372 | INFO     | all job control threads have been joined
[2026-02-03 08:23:38] 2026-02-02 23:23:08,560 | INFO     | all data control threads have been joined
[2026-02-03 08:23:38] 2026-02-02 23:23:08,568 | INFO     | [job] retrieve thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:08,568 | INFO     | [job] job monitor thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:08,569 | INFO     | [job] queue monitor thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:08,977 | INFO     | [job] validate thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:08,997 | INFO     | all payload control threads have been joined
[2026-02-03 08:23:38] 2026-02-02 23:23:09,060 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,082 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,377 | INFO     | [job] control thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,446 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,557 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,565 | INFO     | [data] control thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,568 | INFO     | [data] copytool_out thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,624 | INFO     | [payload] failed_post thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,633 | INFO     | [payload] validate_post thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,752 | INFO     | [data] copytool_in thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:09,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 08:23:38] 2026-02-02 23:23:10,002 | INFO     | [payload] control thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:13,899 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 08:23:38] 2026-02-02 23:23:14,689 | INFO     | [monitor] cgroup control has ended
[2026-02-03 08:23:38] 2026-02-02 23:23:15,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729002129216)>', '<ExcThread(monitor, started 139728632407808)>']
[2026-02-03 08:23:38] 2026-02-02 23:23:20,215 | INFO     | all workflow threads have been joined
[2026-02-03 08:23:38] 2026-02-02 23:23:20,215 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 08:23:38] 2026-02-02 23:23:20,215 | INFO     | traces error code: 0
[2026-02-03 08:23:38] 2026-02-02 23:23:20,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 08:23:38] 2026-02-02 23:23:38,262 | INFO     | PID=922157 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 08:23:38] 2026-02-02 23:23:38,263 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 08:23:38] 2026-02-02 23:23:38,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 08:23:38] 2026-02-02 23:23:38,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 08:23:38] 2026-02-02 23:23:38,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 08:23:38] 2026-02-02 23:23:38,263 | INFO     | [monitor] control thread has ended
[2026-02-03 08:23:38] 2026-02-02 23:23:38,341 [wrapper] ==== pilot stdout END ====
[2026-02-03 08:23:38] 2026-02-02 23:23:38,343 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 08:23:38] 2026-02-02 23:23:38,344 [wrapper] pilotpid: 922157
[2026-02-03 08:23:38] 2026-02-02 23:23:38,346 [wrapper] Pilot exit status: 0
[2026-02-03 08:23:38] 2026-02-02 23:23:38,351 [wrapper] pandaids: 6992590112
[2026-02-03 08:23:38] 2026-02-02 23:23:38,369 [wrapper] cleanup supervisor_pilot  931670 922158
[2026-02-03 08:23:38] 2026-02-02 23:23:38,370 [wrapper] Test setup, not cleaning
[2026-02-03 08:23:38] 2026-02-02 23:23:38,371 [wrapper] apfmon messages muted
[2026-02-03 08:23:38] 2026-02-02 23:23:38,373 [wrapper] ==== wrapper stdout END ====
[2026-02-03 08:23:38] 2026-02-02 23:23:38,374 [wrapper] ==== wrapper stderr END ====
[2026-02-03 08:23:38]  *** Error codes and diagnostics ***
[2026-02-03 08:23:38]     "exeErrorCode": 0,
[2026-02-03 08:23:38]     "exeErrorDiag": "",
[2026-02-03 08:23:38]     "pilotErrorCode": 0,
[2026-02-03 08:23:38]     "pilotErrorDiag": "",
[2026-02-03 08:23:38]  *** Listing of results directory ***
[2026-02-03 08:23:38] total 674912
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc    584422 Feb  2 07:04 pilot3.tar.gz
[2026-02-03 08:23:38] -rwx------. 1 boinc boinc     36322 Feb  2 07:07 runpilot2-wrapper.sh
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc      5111 Feb  2 07:10 queuedata.json
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc       100 Feb  3 06:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 08:23:38] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 06:55 run_atlas
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc       105 Feb  3 06:55 job.xml
[2026-02-03 08:23:38] -rw-r--r--. 2 boinc boinc     15845 Feb  3 06:55 start_atlas.sh
[2026-02-03 08:23:38] drwxrwx--x. 2 boinc boinc        68 Feb  3 06:55 shared
[2026-02-03 08:23:38] -rw-r--r--. 2 boinc boinc    597767 Feb  3 06:55 input.tar.gz
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc      9345 Feb  3 06:55 init_data.xml
[2026-02-03 08:23:38] -rw-r--r--. 2 boinc boinc 506477603 Feb  3 06:55 EVNT.48310747._000074.pool.root.1
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc         0 Feb  3 06:55 boinc_lockfile
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc      2523 Feb  3 06:55 pandaJob.out
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc   1009308 Feb  3 06:55 agis_schedconf.cvmfs.json
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc   1511668 Feb  3 06:56 agis_ddmendpoints.agis.ALL.json
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc       426 Feb  3 06:56 workernode_map.json
[2026-02-03 08:23:38] drwx------. 5 boinc boinc      4096 Feb  3 06:56 pilot3
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc 178592009 Feb  3 08:22 HITS.48310749._003664.pool.root.1
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc       530 Feb  3 08:22 boinc_task_state.xml
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc      1011 Feb  3 08:22 memory_monitor_summary.json
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc    301553 Feb  3 08:23 log.48310749._003664.job.log.tgz.1
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc      6312 Feb  3 08:23 heartbeat.json
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc        27 Feb  3 08:23 wrapper_checkpoint.txt
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc      8192 Feb  3 08:23 boinc_mmap_file
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc       746 Feb  3 08:23 pilotlog.txt
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc        95 Feb  3 08:23 pilot_heartbeat.json
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc    757240 Feb  3 08:23 log.48310749._003664.job.log.1
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc       357 Feb  3 08:23 output.list
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc       620 Feb  3 08:23 runtime_log
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc   1075200 Feb  3 08:23 result.tar.gz
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc      8764 Feb  3 08:23 runtime_log.err
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc       640 Feb  3 08:23 2xFMDmymu68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjNRKDmL5kKRo.diag
[2026-02-03 08:23:38] -rw-r--r--. 1 boinc boinc     21460 Feb  3 08:23 stderr.txt
[2026-02-03 08:23:38] HITS file was successfully produced:
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc 178592009 Feb  3 08:22 shared/HITS.pool.root.1
[2026-02-03 08:23:38]  *** Contents of shared directory: ***
[2026-02-03 08:23:38] total 670668
[2026-02-03 08:23:38] -rw-r--r--. 2 boinc boinc     15845 Feb  3 06:55 start_atlas.sh
[2026-02-03 08:23:38] -rw-r--r--. 2 boinc boinc    597767 Feb  3 06:55 input.tar.gz
[2026-02-03 08:23:38] -rw-r--r--. 2 boinc boinc 506477603 Feb  3 06:55 ATLAS.root_0
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc 178592009 Feb  3 08:22 HITS.pool.root.1
[2026-02-03 08:23:38] -rw-------. 1 boinc boinc   1075200 Feb  3 08:23 result.tar.gz
08:23:39 (918019): run_atlas exited; CPU time 29485.583112
08:23:39 (918019): called boinc_finish(0)

</stderr_txt>
]]>

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